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7KMZ
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BU of 7kmz by Molmil
Cryo-EM structure of double ACE2-bound SARS-CoV-2 trimer Spike at pH 7.4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Gorman, J, Kwong, P.D, Shapiro, L.
登録日2020-11-03
公開日2020-12-09
最終更新日2021-12-15
実験手法ELECTRON MICROSCOPY (3.62 Å)
主引用文献Cryo-EM Structures of SARS-CoV-2 Spike without and with ACE2 Reveal a pH-Dependent Switch to Mediate Endosomal Positioning of Receptor-Binding Domains.
Cell Host Microbe, 28, 2020
4MM0
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BU of 4mm0 by Molmil
Crystal Structure Analysis of the Putative Thioether Synthase SgvP Involved in the Tailoring Step of Griseoviridin
分子名称: P450-like monooxygenase, PROTOPORPHYRIN IX CONTAINING FE
著者Zhang, H, Huang, L, Yi, M, Cai, T, Zhang, H.
登録日2013-09-07
公開日2014-09-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Analysis of SgvP: a Putative Thioether Synthase Involved in the Tailoring Step of Griseoviridin
To be Published
4HXI
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BU of 4hxi by Molmil
Crystal structure of KLHL3/Cul3 complex
分子名称: Cullin-3, Kelch-like protein 3
著者Ji, A.X, Prive, G.G.
登録日2012-11-10
公開日2013-03-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.513 Å)
主引用文献Crystal structure of KLHL3 in complex with Cullin3.
Plos One, 8, 2013
7L2C
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BU of 7l2c by Molmil
Crystallographic structure of neutralizing antibody 2-51 in complex with SARS-CoV-2 spike N-terminal domain (NTD)
分子名称: 2-51 heavy chain, 2-51 light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Cerutti, G, Reddem, E.R, Shapiro, L.
登録日2020-12-16
公開日2021-02-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.65 Å)
主引用文献Potent SARS-CoV-2 neutralizing antibodies directed against spike N-terminal domain target a single supersite.
Cell Host Microbe, 29, 2021
8UPL
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BU of 8upl by Molmil
Cryo-EM structure of a Clockwise locked form of the Salmonella enterica Typhimurium flagellar C-ring, with C34 symmetry applied
分子名称: Flagellar M-ring protein, Flagellar motor switch protein FliG, Flagellar motor switch protein FliM, ...
著者Johnson, S, Deme, J.C, Lea, S.M.
登録日2023-10-22
公開日2024-01-24
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (5.4 Å)
主引用文献Structural basis of directional switching by the bacterial flagellum.
Nat Microbiol, 9, 2024
7KSM
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BU of 7ksm by Molmil
Human mitochondrial LONP1 with endogenous substrate
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Lon protease homolog, ...
著者Shin, M, Watson, E.R, Song, A.S, Mindrebo, J.T, Novick, S.R, Griffin, P, Wiseman, R.L, Lander, G.C.
登録日2020-11-23
公開日2020-12-02
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structures of the human LONP1 protease reveal regulatory steps involved in protease activation.
Nat Commun, 12, 2021
5CIH
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BU of 5cih by Molmil
Complex of yeast cytochrome c peroxidase (W191Y) with iso-1 cytochrome c
分子名称: Cytochrome c iso-1, Cytochrome c peroxidase, mitochondrial, ...
著者Crane, B.R, Payne, T.M.
登録日2015-07-12
公開日2016-08-03
最終更新日2021-03-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Constraints on the Radical Cation Center of Cytochrome c Peroxidase for Electron Transfer from Cytochrome c.
Biochemistry, 55, 2016
3AIS
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BU of 3ais by Molmil
Crystal structure of a mutant beta-glucosidase in wheat complexed with DIMBOA-Glc
分子名称: (2S)-2,4-dihydroxy-7-methoxy-2H-1,4-benzoxazin-3(4H)-one, Beta-glucosidase, beta-D-glucopyranose
著者Sue, M, Nakamura, C, Miyamoto, T, Yajima, S.
登録日2010-05-18
公開日2011-03-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Active-site architecture of benzoxazinone-glucoside beta-D-glucosidases in Triticeae
Plant Sci., 180, 2011
1OJY
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BU of 1ojy by Molmil
Decay accelerating factor (cd55): the structure of an intact human complement regulator.
分子名称: ACETATE ION, COMPLEMENT DECAY-ACCELERATING FACTOR, GLYCEROL, ...
著者Lukacik, P, Roversi, P, White, J, Esser, D, Smith, G.P, Billington, J, Williams, P.A, Rudd, P.M, Wormald, M.R, Crispin, M.D.M, Radcliffe, C.M, Dwek, R.A, Evans, D.J, Morgan, B.P, Smith, R.A.G, Lea, S.M.
登録日2003-07-16
公開日2004-01-07
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Complement Regulation at the Molecular Level: The Structure of Decay-Accelerating Factor
Proc.Natl.Acad.Sci.USA, 101, 2004
4MNJ
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BU of 4mnj by Molmil
Crystal Structure of GH18 Chitinase from Cycad, Cycas revoluta
分子名称: ACETATE ION, Chitinase A
著者Umemoto, N, Numata, T, Ohnuma, T, Osawa, T, Taira, T, Fukamizo, T.
登録日2013-09-11
公開日2014-10-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystal Structure of GH18 Chitinase from Cycad, Cycas revoluta
To be Published
4HZG
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BU of 4hzg by Molmil
Structure of haloalkane dehalogenase DhaA from Rhodococcus rhodochrous
分子名称: CHLORIDE ION, Haloalkane dehalogenase
著者Stsiapanava, A, Weiss, M.S, Mesters, J.R, Kuta Smatanova, I.
登録日2012-11-15
公開日2013-10-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystallographic analysis of 1,2,3-trichloropropane biodegradation by the haloalkane dehalogenase DhaA31.
Acta Crystallogr.,Sect.D, 70, 2014
7QBM
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BU of 7qbm by Molmil
Structure of the activation intermediate of cathepsin K in complex with the 3-cyano-3-aza-beta-amino acid inhibitor Gu2602
分子名称: ACETATE ION, Cathepsin K, MAGNESIUM ION, ...
著者Benysek, J, Busa, M, Mares, M.
登録日2021-11-19
公開日2022-01-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Highly potent inhibitors of cathepsin K with a differently positioned cyanohydrazide warhead: structural analysis of binding mode to mature and zymogen-like enzymes.
J Enzyme Inhib Med Chem, 37, 2022
5FFN
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BU of 5ffn by Molmil
Complex of subtilase SubTY from Bacillus sp. TY145 with chymotrypsin inhibitor CI2A
分子名称: CALCIUM ION, Enzyme subtilase SubTY from Bacillus sp. TY145, SODIUM ION, ...
著者McAuley, K.E, Svendsen, A, Oestergaard, P.R, Dohnalek, J, Wilson, K.S.
登録日2015-12-18
公開日2016-05-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Stabilization of Enzymes by Metal Binding: Structures of Two Alkalophilic Bacillus Subtilases and Analysis of the Second Metal-Binding Site of the Subtilase Family
Book, 2016
7QJE
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BU of 7qje by Molmil
Structure of recombinant human gamma-Tubulin Ring Complex 4-spoked assembly intermediate (spokes 9-12)
分子名称: Gamma-tubulin complex component 4, Gamma-tubulin complex component 5, Gamma-tubulin complex component 6, ...
著者Tonon, G, Zupa, E, Pfeffer, S.
登録日2021-12-16
公開日2022-01-26
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (7.8 Å)
主引用文献Modular assembly of the principal microtubule nucleator gamma-TuRC.
Nat Commun, 13, 2022
5FV6
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BU of 5fv6 by Molmil
KpFlo11 presents a novel member of the Flo11 family with a unique recognition pattern for homophilic interactions
分子名称: ACETATE ION, Flocculation protein FLO11, GLYCEROL, ...
著者Kraushaar, T, Brueckner, S, Mikolaiski, M, Schreiner, F, Veelders, M, Moesch, H.U, Essen, L.O.
登録日2016-02-03
公開日2017-02-22
最終更新日2021-06-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Kin discrimination in social yeast is mediated by cell surface receptors of the Flo11 adhesin family.
Elife, 9, 2020
5FG1
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BU of 5fg1 by Molmil
Structure of the conserved yeast listerin (Ltn1) selenomethionine-substituted N-terminal domain, TRIGONAL FORM
分子名称: E3 ubiquitin-protein ligase listerin, POTASSIUM ION
著者Doamekpor, S.K, Lima, C.D.
登録日2015-12-19
公開日2016-07-06
最終更新日2019-11-20
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structure and function of the yeast listerin (Ltn1) conserved N-terminal domain in binding to stalled 60S ribosomal subunits.
Proc.Natl.Acad.Sci.USA, 113, 2016
3AJQ
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BU of 3ajq by Molmil
Crystal structure of human H ferritin E140Q mutant
分子名称: Ferritin heavy chain, MAGNESIUM ION
著者Masuda, T, Mikami, B.
登録日2010-06-11
公開日2010-08-25
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献The universal mechanism for iron translocation to the ferroxidase site in ferritin, which is mediated by the well conserved transit site
Biochem.Biophys.Res.Commun., 400, 2010
4I0P
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BU of 4i0p by Molmil
HLA-DO in complex with HLA-DM
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, GLYCEROL, ...
著者Guce, A.I, Mortimer, S.E, Stern, L.J.
登録日2012-11-18
公開日2012-12-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献HLA-DO acts as a substrate mimic to inhibit HLA-DM by a competitive mechanism.
Nat.Struct.Mol.Biol., 20, 2013
4I1V
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BU of 4i1v by Molmil
Crystal structure of a dephospho-CoA kinase from Burkholderia vietnamiensis bound to ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Dephospho-CoA kinase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2012-11-21
公開日2013-01-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of a dephospho-CoA kinase from Burkholderia vietnamiensis bound to ADP
TO BE PUBLISHED
1OHV
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BU of 1ohv by Molmil
4-AMINOBUTYRATE-AMINOTRANSFERASE FROM PIG
分子名称: 4-AMINOBUTYRATE AMINOTRANSFERASE, ACETATE ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Storici, P, Schirmer, T.
登録日2003-06-02
公開日2003-10-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structures of {Gamma}-Aminobutyric Acid (Gaba) Aminotransferase, a Pyridoxal 5'-Phosphate, and [2Fe-2S] Cluster-Containing Enzyme, Complexed with {Gamma}-Ethynyl-Gaba and with the Antiepilepsy Drug Vigabatrin
J.Biol.Chem., 279, 2004
7QBO
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BU of 7qbo by Molmil
Structure of the activation intermediate of cathepsin K in complex with the azadipeptide nitrile inhibitor Gu1303
分子名称: (phenylmethyl) ~{N}-[(2~{S})-1-[[aminomethyl(methyl)amino]-methyl-amino]-1-oxidanylidene-3-phenyl-propan-2-yl]carbamate, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Benysek, J, Busa, M, Mares, M.
登録日2021-11-19
公開日2022-01-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Highly potent inhibitors of cathepsin K with a differently positioned cyanohydrazide warhead: structural analysis of binding mode to mature and zymogen-like enzymes.
J Enzyme Inhib Med Chem, 37, 2022
4I21
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BU of 4i21 by Molmil
Crystal structure of L858R + T790M EGFR kinase domain in complex with MIG6 peptide
分子名称: ERBB receptor feedback inhibitor 1, Epidermal growth factor receptor
著者Gajiwala, K.S, Feng, J, Ferre, R, Ryan, K, Brodsky, O, Stewart, A.
登録日2012-11-21
公開日2013-01-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.37 Å)
主引用文献Insights into the Aberrant Activity of Mutant EGFR Kinase Domain and Drug Recognition.
Structure, 21, 2013
8U7Z
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BU of 8u7z by Molmil
KCTD5/Cullin3/Gbeta1gamma2 Complex: Local Refinment of KCTD5(CTD)/Gbeta1gamma2
分子名称: BTB/POZ domain-containing protein KCTD5, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
著者Kuntz, D.A, Nguyen, D.M, Narayanan, N, Prive, G.G.
登録日2023-09-15
公開日2023-10-11
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献Structure and dynamics of a pentameric KCTD5/CUL3/G beta gamma E3 ubiquitin ligase complex.
Proc.Natl.Acad.Sci.USA, 121, 2024
3FB0
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BU of 3fb0 by Molmil
Metal exchange in thermolysin
分子名称: CALCIUM ION, DIMETHYL SULFOXIDE, Thermolysin
著者Englert, L, Heine, A, Klebe, G.
登録日2008-11-18
公開日2009-12-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Metal exchange in thermolysin
To be Published
4MKJ
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BU of 4mkj by Molmil
Crystal structure of L-methionine gamma-lyase from Citrobacter freundii modified by allicine
分子名称: Methionine gamma-lyase, PENTAETHYLENE GLYCOL, SODIUM ION, ...
著者Revtovich, S.V, Nikulin, A.D, Morozova, E.A, Zakomirdina, L.N, Demidkina, T.V.
登録日2013-09-05
公開日2014-11-12
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.849 Å)
主引用文献Alliin is a suicide substrate of Citrobacter freundii methionine gamma-lyase: structural bases of inactivation of the enzyme.
Acta Crystallogr.,Sect.D, 70, 2014

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件を2024-08-14に公開中

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