Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3AIU
DownloadVisualize
BU of 3aiu by Molmil
Crystal structure of beta-glucosidase in rye
分子名称: Beta-glucosidase, GLYCEROL, SULFATE ION
著者Sue, M, Nakamura, C, Miyamoto, T, Yajima, S.
登録日2010-05-18
公開日2011-02-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Active-site architecture of benzoxazinone-glucoside beta-D-glucosidases in Triticeae
Plant Sci., 180, 2011
3AIV
DownloadVisualize
BU of 3aiv by Molmil
Crystal structure of beta-glucosidase in rye complexed with an aglycone DIMBOA
分子名称: 2,4-DIHYDROXY-7-(METHYLOXY)-2H-1,4-BENZOXAZIN-3(4H)-ONE, Beta-glucosidase
著者Sue, M, Nakamura, C, Miyamoto, T, Yajima, S.
登録日2010-05-18
公開日2011-02-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Active-site architecture of benzoxazinone-glucoside beta-D-glucosidases in Triticeae
Plant Sci., 180, 2011
1MRC
DownloadVisualize
BU of 1mrc by Molmil
PREPARATION, CHARACTERIZATION AND CRYSTALLIZATION OF AN ANTIBODY FAB FRAGMENT THAT RECOGNIZES RNA. CRYSTAL STRUCTURES OF NATIVE FAB AND THREE FAB-MONONUCLEOTIDE COMPLEXES
分子名称: IGG2B-KAPPA JEL103 FAB (HEAVY CHAIN), IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN), IMIDAZOLE, ...
著者Pokkuluri, P.R, Cygler, M.
登録日1994-06-13
公開日1995-02-14
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Preparation, characterization and crystallization of an antibody Fab fragment that recognizes RNA. Crystal structures of native Fab and three Fab-mononucleotide complexes.
J.Mol.Biol., 243, 1994
3AKR
DownloadVisualize
BU of 3akr by Molmil
Crystal structure of xylanase from Trichoderma longibrachiatum
分子名称: GLYCEROL, SODIUM ION, xylanase
著者Sugahara, M, Kunishima, N.
登録日2010-07-15
公開日2011-06-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Packing Space Expansion of Protein Crystallization Screening with Synthetic Zeolite as a Heteroepitaxic Nucleant
Cryst.Growth Des., 11, 2011
1MRD
DownloadVisualize
BU of 1mrd by Molmil
PREPARATION, CHARACTERIZATION AND CRYSTALLIZATION OF AN ANTIBODY FAB FRAGMENT THAT RECOGNIZES RNA. CRYSTAL STRUCTURES OF NATIVE FAB AND THREE FAB-MONONUCLEOTIDE COMPLEXES
分子名称: IGG2B-KAPPA JEL103 FAB (HEAVY CHAIN), IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN), IMIDAZOLE, ...
著者Pokkuluri, P.R, Cygler, M.
登録日1994-06-13
公開日1995-02-14
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Preparation, characterization and crystallization of an antibody Fab fragment that recognizes RNA. Crystal structures of native Fab and three Fab-mononucleotide complexes.
J.Mol.Biol., 243, 1994
3U0B
DownloadVisualize
BU of 3u0b by Molmil
Crystal structure of an oxidoreductase from Mycobacterium smegmatis
分子名称: Oxidoreductase, short chain dehydrogenase/reductase family protein, SODIUM ION
著者Arakaki, T.L, Staker, B.L, Clifton, M.C, Abendroth, J, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2011-09-28
公開日2011-10-05
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and functional characterization of FabG4 from Mycolicibacterium smegmatis.
Acta Crystallogr.,Sect.F, 80, 2024
3AKS
DownloadVisualize
BU of 3aks by Molmil
Crystal structure of xylanase from Trichoderma longibrachiatum
分子名称: GLYCEROL, SODIUM ION, xylanase
著者Sugahara, M, Kunishima, N.
登録日2010-07-15
公開日2011-06-01
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献Packing Space Expansion of Protein Crystallization Screening with Synthetic Zeolite as a Heteroepitaxic Nucleant
Cryst.Growth Des., 11, 2011
3AMC
DownloadVisualize
BU of 3amc by Molmil
Crystal structures of Thermotoga maritima Cel5A, apo form and dimer/au
分子名称: Endoglucanase
著者Wu, T.H, Huang, C.H, Ko, T.P, Lai, H.L, Ma, Y, Cheng, Y.S, Liu, J.R, Guo, R.T.
登録日2010-08-19
公開日2011-08-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Diverse substrate recognition mechanism revealed by Thermotoga maritima Cel5A structures in complex with cellotetraose, cellobiose and mannotriose
Biochim.Biophys.Acta, 1814, 2011
3AMQ
DownloadVisualize
BU of 3amq by Molmil
E134C-Cellobiose co-crystal of cellulase 12A from thermotoga maritima
分子名称: Endo-1,4-beta-glucanase, beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Cheng, Y.-S, Ko, T.-P, Liu, J.-R, Guo, R.-T.
登録日2010-08-20
公開日2011-03-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure and substrate-binding mode of cellulase 12A from Thermotoga maritima
Proteins, 79, 2011
3ANK
DownloadVisualize
BU of 3ank by Molmil
Crystal structure of unsaturated glucuronyl hydrolase mutant D175N from Streptcoccus agalactiae complexed with dGlcA-GalNAc6S
分子名称: 1,2-ETHANEDIOL, 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-6-O-sulfo-beta-D-galactopyranose, Putative uncharacterized protein gbs1889
著者Nakamichi, Y, Maruyama, Y, Mikami, B, Hashimoto, W, Murata, K.
登録日2010-09-02
公開日2010-10-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Structural determinants in streptococcal unsaturated glucuronyl hydrolase for recognition of glycosaminoglycan sulfate groups
J.Biol.Chem., 286, 2011
3AOE
DownloadVisualize
BU of 3aoe by Molmil
Crystal structure of hetero-hexameric glutamate dehydrogenase from Thermus thermophilus (Leu bound form)
分子名称: Glutamate dehydrogenase, LEUCINE
著者Tomita, T, Kuzuyama, T, Nishiyama, M.
登録日2010-09-27
公開日2011-09-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献An unique allosteric regulation revealed by hetero-hexameric glutamate dehydrogenase from Thermus thermophilus
To be Published
3U52
DownloadVisualize
BU of 3u52 by Molmil
X-ray Crystal Structure of Xenon-Pressurized Phenol Hydroxylase from Pseudomonas sp. OX1
分子名称: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, COPPER (II) ION, ...
著者McCormick, M.S, Lippard, S.J.
登録日2011-10-10
公開日2011-12-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Analysis of Substrate Access to Active Sites in Bacterial Multicomponent Monooxygenase Hydroxylases: X-ray Crystal Structure of Xenon-Pressurized Phenol Hydroxylase from Pseudomonas sp. OX1.
Biochemistry, 50, 2011
3ANJ
DownloadVisualize
BU of 3anj by Molmil
Crystal structure of unsaturated glucuronyl hydrolase from Streptcoccus agalactiae
分子名称: Putative uncharacterized protein gbs1889
著者Nakamichi, Y, Maruyama, Y, Mikami, B, Hashimoto, W, Murata, K.
登録日2010-09-02
公開日2010-10-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural determinants in streptococcal unsaturated glucuronyl hydrolase for recognition of glycosaminoglycan sulfate groups
J.Biol.Chem., 286, 2011
3U6D
DownloadVisualize
BU of 3u6d by Molmil
MutM set 1 GpGo
分子名称: DNA (5'-D(*A*GP*GP*TP*AP*GP*AP*TP*CP*CP*CP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*GP*(8OG)P*GP*AP*(TX)P*CP*TP*AP*CP*C)-3'), Formamidopyrimidine-DNA glycosylase, ...
著者Sung, R.J, Zhang, M, Qi, Y, Verdine, G.L.
登録日2011-10-12
公開日2012-04-25
最終更新日2013-09-25
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Sequence-dependent structural variation in DNA undergoing intrahelical inspection by the DNA glycosylase MutM.
J.Biol.Chem., 287, 2012
1O07
DownloadVisualize
BU of 1o07 by Molmil
Crystal Structure of the complex between Q120L/Y150E mutant of AmpC and a beta-lactam inhibitor (MXG)
分子名称: 2-(1-{2-[4-(2-ACETYLAMINO-PROPIONYLAMINO)-4-CARBOXY-BUTYRYLAMINO]-6-AMINO-HEXANOYLAMINO}-2-OXO-ETHYL)-5-METHYLENE-5,6-DIHYDRO-2H-[1,3]THIAZINE-4-CARBOXYLIC ACID, Beta-lactamase, POTASSIUM ION
著者Meroueh, S.O, Minasov, G, Lee, W, Shoichet, B.K, Mobashery, S.
登録日2003-02-20
公開日2003-08-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Structural Aspects for Evolution of beta-Lactamases from Penicillin-Binding Proteins
J.Am.Chem.Soc., 125, 2003
1NZ7
DownloadVisualize
BU of 1nz7 by Molmil
POTENT, SELECTIVE INHIBITORS OF PROTEIN TYROSINE PHOSPHATASE 1B USING A SECOND PHOSPHOTYROSINE BINDING SITE, complexed with compound 19.
分子名称: 2-[(4-{2-ACETYLAMINO-2-[4-(1-CARBOXY-3-METHYLSULFANYL-PROPYLCARBAMOYL)-BUTYLCARBAMOYL]-ETHYL}-2-ETHYL-PHENYL)-OXALYL-AM INO]-BENZOIC ACID, Protein-tyrosine phosphatase, non-receptor type 1
著者Xin, Z, Oost, T.K, Abad-Zapatero, C, Hajduk, P.J, Pei, Z, Szczepankiewicz, B.G, Hutchins, C.W, Ballaron, S.J, Stashko, M.A, Lubben, T, Trevillyan, J.M, Jirousek, M.R, Liu, G.
登録日2003-02-16
公開日2003-05-20
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Potent, Selective Inhibitors of Protein Tyrosine Phosphatase 1B
BIOORG.MED.CHEM.LETT., 13, 2003
3TWO
DownloadVisualize
BU of 3two by Molmil
The crystal structure of CAD from Helicobacter pylori complexed with NADP(H)
分子名称: Mannitol dehydrogenase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ZINC ION
著者Seo, K.H, Zhuang, N.N, Cong, C, Lee, K.H.
登録日2011-09-22
公開日2011-10-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Unusual NADPH conformation in the crystal structure of a cinnamyl alcohol dehydrogenase from Helicobacter pylori in complex with NADP(H) and substrate docking analysis
Febs Lett., 586, 2012
3AE9
DownloadVisualize
BU of 3ae9 by Molmil
Crystal structure of porcine heart mitochondrial complex II bound with N-(3-Pentafluorophenyloxy-phenyl)-2-trifluoromethyl-benzamide
分子名称: FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Harada, S, Sasaki, T, Shindo, M, Kido, Y, Inaoka, D.K, Omori, J, Osanai, A, Sakamoto, K, Mao, J, Matsuoka, S, Inoue, M, Honma, T, Tanaka, A, Kita, K.
登録日2010-02-04
公開日2011-02-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献Structural Insights into the Molecular Design of Flutolanil Derivatives Targeted for Fumarate Respiration of Parasite Mitochondria
Int J Mol Sci, 16, 2015
3U8U
DownloadVisualize
BU of 3u8u by Molmil
Crystal structure of Human Apurinic/Apyridinimic Endonuclease, Ape1 in a new crystal form
分子名称: CHLORIDE ION, DNA-(apurinic or apyrimidinic site) lyase, MAGNESIUM ION
著者Agarwal, R, Naidu, M.D.
登録日2011-10-17
公開日2011-10-26
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of Human Apurinic/Apyridinimic Endonuclease, Ape1 in a new crystal form
To be Published
3TXF
DownloadVisualize
BU of 3txf by Molmil
HEWL co-crystallization with cisplatin in DMSO media with glycerol as the cryoprotectant
分子名称: CHLORIDE ION, Cisplatin, DIMETHYL SULFOXIDE, ...
著者Tanley, S.W.M, Schreurs, A.M.M, Helliwell, J.R, Kroon-Batenburg, L.M.J.
登録日2011-09-23
公開日2013-01-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Experience with exchange and archiving of raw data: comparison of data from two diffractometers and four software packages on a series of lysozyme crystals.
J.Appl.Crystallogr., 46, 2013
3CZN
DownloadVisualize
BU of 3czn by Molmil
Golgi alpha-mannosidase II (D204A nucleophile mutant) in complex with GnMan5Gn
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, Alpha-mannosidase 2, ...
著者Shah, N, Rose, D.R.
登録日2008-04-29
公開日2008-06-24
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Golgi alpha-mannosidase II cleaves two sugars sequentially in the same catalytic site.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3TK2
DownloadVisualize
BU of 3tk2 by Molmil
Crystallographic structure of phenylalanine hydroxylase from Chromobacterium violaceum cocrystallized with phenylalanine in a site distal to the active site
分子名称: COBALT (II) ION, PHENYLALANINE, Phenylalanine-4-hydroxylase
著者Ronau, J.A, Abu-Omar, M.M, Das, C.
登録日2011-08-25
公開日2012-09-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献An additional substrate binding site in a bacterial phenylalanine hydroxylase.
Eur.Biophys.J., 42, 2013
6NWK
DownloadVisualize
BU of 6nwk by Molmil
Structure of the Ancestral Glucocorticoid Receptor 2 ligand binding domain in complex with dexamethasone and PGC1a coregulator fragment
分子名称: ACETYL GROUP, DEXAMETHASONE, DIMETHYL SULFOXIDE, ...
著者Liu, X, Ortlund, E.A.
登録日2019-02-06
公開日2019-10-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献First High-Resolution Crystal Structures of the Glucocorticoid Receptor Ligand-Binding Domain-Peroxisome Proliferator-ActivatedgammaCoactivator 1-alphaComplex with Endogenous and Synthetic Glucocorticoids.
Mol.Pharmacol., 96, 2019
3TON
DownloadVisualize
BU of 3ton by Molmil
Crystral Structure of the C-terminal Subunit of Human Maltase-Glucoamylase
分子名称: Maltase-glucoamylase, intestinal
著者Shen, Y, Qin, X.H, Ren, L.M.
登録日2011-09-06
公開日2011-11-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.953 Å)
主引用文献Structural insight into substrate specificity of human intestinal maltase-glucoamylase
Protein Cell, 2, 2011
3D3I
DownloadVisualize
BU of 3d3i by Molmil
Crystal structural of Escherichia coli K12 YgjK, a glucosidase belonging to glycoside hydrolase family 63
分子名称: CALCIUM ION, GLYCEROL, Uncharacterized protein ygjK
著者Kurakata, Y, Uechi, A, Yoshida, H, Kamitori, S, Sakano, Y, Nishikawa, A, Tonozuka, T.
登録日2008-05-12
公開日2008-06-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Structural insights into the substrate specificity and function of Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside hydrolase family 63.
J.Mol.Biol., 381, 2008

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon