PDB: 2705 件ウェブページステータス検索Chemie searchBIRD

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8FL4	Human nuclear pre-60S ribosomal subunit (State I3) 分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Vanden Broeck, A, Klinge, S. 登録日 2022-12-21 公開日 2023-07-12 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (2.89 Å) 主引用文献 Principles of human pre-60 S biogenesis. Science, 381, 2023
8FL6	Human nuclear pre-60S ribosomal subunit (State J1) 分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Vanden Broeck, A, Klinge, S. 登録日 2022-12-21 公開日 2023-07-12 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (2.62 Å) 主引用文献 Principles of human pre-60 S biogenesis. Science, 381, 2023
8FLC	Human nuclear pre-60S ribosomal subunit (State K3) 分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Vanden Broeck, A, Klinge, S. 登録日 2022-12-21 公開日 2023-07-12 最終更新日 2023-07-26 実験手法 ELECTRON MICROSCOPY (2.76 Å) 主引用文献 Principles of human pre-60 S biogenesis. Science, 381, 2023
8FKZ	Human nucleolar pre-60S ribosomal subunit (State G) 分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L12, ... 著者 Vanden Broeck, A, Klinge, S. 登録日 2022-12-21 公開日 2023-07-12 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.04 Å) 主引用文献 Principles of human pre-60 S biogenesis. Science, 381, 2023
8FLD	Human nuclear pre-60S ribosomal subunit (State L1) 分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Vanden Broeck, A, Klinge, S. 登録日 2022-12-21 公開日 2023-07-12 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.58 Å) 主引用文献 Principles of human pre-60 S biogenesis. Science, 381, 2023
8FL7	Human nuclear pre-60S ribosomal subunit (State J2) 分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Vanden Broeck, A, Klinge, S. 登録日 2022-12-21 公開日 2023-07-12 最終更新日 2023-07-26 実験手法 ELECTRON MICROSCOPY (2.55 Å) 主引用文献 Principles of human pre-60 S biogenesis. Science, 381, 2023
8FON	Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Nguyen, H.A, Hoffer, E.D, Maehigashi, T, Fagan, C.E, Dunham, C.M. 登録日 2023-01-02 公開日 2023-03-29 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (3.64 Å) 主引用文献 Structural basis for reduced ribosomal A-site fidelity in response to P-site codon-anticodon mismatches. J.Biol.Chem., 299, 2023
8FIZ	Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex) 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Florez Ariza, A, Wee, L, Tong, A, Canari, C, Grob, P, Nogales, E, Bustamante, C. 登録日 2022-12-18 公開日 2023-03-29 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 A trailing ribosome speeds up RNA polymerase at the expense of transcript fidelity via force and allostery. Cell, 186, 2023
8FOM	Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Nguyen, H.A, Hoffer, E.D, Maehigashi, T, Fagan, C.E, Dunham, C.M. 登録日 2023-01-02 公開日 2023-03-29 最終更新日 2023-04-26 実験手法 X-RAY DIFFRACTION (3.58 Å) 主引用文献 Structural basis for reduced ribosomal A-site fidelity in response to P-site codon-anticodon mismatches. J.Biol.Chem., 299, 2023
8FMW	The structure of a hibernating ribosome in the Lyme disease pathogen 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Sharma, M.R, Manjari, S.R, Agrawal, E.K, Keshavan, P, Koripella, R.K, Majumdar, S, Marcinkiewicz, A.L, Lin, Y.P, Agrawal, R.K, Banavali, N.K. 登録日 2022-12-25 公開日 2023-11-08 実験手法 ELECTRON MICROSCOPY (2.86 Å) 主引用文献 The structure of a hibernating ribosome in a Lyme disease pathogen. Nat Commun, 14, 2023
8G38	Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate 分子名称: 16S, 23S, 30S ribosomal protein S10, ... 著者 Bhattacharjee, S, Brown, P.Z, Frank, J. 登録日 2023-02-07 公開日 2023-12-06 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Time resolution in cryo-EM using a PDMS-based microfluidic chip assembly and its application to the study of HflX-mediated ribosome recycling. Cell, 187, 2024
8G31	Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate 分子名称: 16S, 23S, 30S ribosomal protein S10, ... 著者 Bhattacharjee, S, Brown, P.Z, Frank, J. 登録日 2023-02-06 公開日 2023-12-06 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Time resolution in cryo-EM using a PDMS-based microfluidic chip assembly and its application to the study of HflX-mediated ribosome recycling. Cell, 187, 2024
8G2U	Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Bhattacharjee, S, Brown, P.Z, Frank, J. 登録日 2023-02-06 公開日 2023-12-06 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Time resolution in cryo-EM using a PDMS-based microfluidic chip assembly and its application to the study of HflX-mediated ribosome recycling. Cell, 187, 2024
8G34	Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate 分子名称: 16S, 23S, 30S ribosomal protein S10, ... 著者 Bhattacharjee, S, Brown, P.Z, Frank, J. 登録日 2023-02-06 公開日 2023-12-06 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Time resolution in cryo-EM using a PDMS-based microfluidic chip assembly and its application to the study of HflX-mediated ribosome recycling. Cell, 187, 2024
8FKY	Human nucleolar pre-60S ribosomal subunit (State F) 分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L10a, ... 著者 Vanden Broeck, A, Klinge, S. 登録日 2022-12-21 公開日 2023-07-12 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (2.67 Å) 主引用文献 Principles of human pre-60 S biogenesis. Science, 381, 2023
8FKV	Human nucleolar pre-60S ribosomal subunit (State D1) 分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L10a, ... 著者 Vanden Broeck, A, Klinge, S. 登録日 2022-12-21 公開日 2023-07-12 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (2.47 Å) 主引用文献 Principles of human pre-60 S biogenesis. Science, 381, 2023
8FKX	Human nucleolar pre-60S ribosomal subunit (State E) 分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L10a, ... 著者 Vanden Broeck, A, Klinge, S. 登録日 2022-12-21 公開日 2023-07-12 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (2.59 Å) 主引用文献 Principles of human pre-60 S biogenesis. Science, 381, 2023
8FL0	Human nucleolar pre-60S ribosomal subunit (State H) 分子名称: 28S rRNA, 5S rRNA, 60S ribosomal protein L11, ... 著者 Vanden Broeck, A, Klinge, S. 登録日 2022-12-21 公開日 2023-07-12 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.91 Å) 主引用文献 Principles of human pre-60 S biogenesis. Science, 381, 2023
8G7S	Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV) 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Rybak, M.Y, Gagnon, M.G. 登録日 2023-02-16 公開日 2024-03-06 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structures of the ribosome bound to EF-Tu-isoleucine tRNA elucidate the mechanism of AUG avoidance. Nat.Struct.Mol.Biol., 31, 2024
8G7Q	Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II) 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Rybak, M.Y, Gagnon, M.G. 登録日 2023-02-16 公開日 2024-03-06 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structures of the ribosome bound to EF-Tu-isoleucine tRNA elucidate the mechanism of AUG avoidance. Nat.Struct.Mol.Biol., 31, 2024
8G7R	Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III) 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Rybak, M.Y, Gagnon, M.G. 登録日 2023-02-16 公開日 2024-03-06 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structures of the ribosome bound to EF-Tu-isoleucine tRNA elucidate the mechanism of AUG avoidance. Nat.Struct.Mol.Biol., 31, 2024
8G7P	Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I) 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Rybak, M.Y, Gagnon, M.G. 登録日 2023-02-16 公開日 2024-03-06 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structures of the ribosome bound to EF-Tu-isoleucine tRNA elucidate the mechanism of AUG avoidance. Nat.Struct.Mol.Biol., 31, 2024
5T2A	CryoEM structure of the Leishmania donovani 80S ribosome at 2.9 Angstrom resolution 分子名称: 18S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Zhang, X, Lai, M, Zhou, Z.H. 登録日 2016-08-23 公開日 2017-01-25 最終更新日 2018-07-18 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structures and stabilization of kinetoplastid-specific split rRNAs revealed by comparing leishmanial and human ribosomes. Nat Commun, 7, 2016
5TGA	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 3'-amino-3'-deoxyadenosine 5'-(dihydrogen phosphate), ... 著者 Melnikov, S, Mailliot, J. 登録日 2016-09-27 公開日 2016-11-23 最終更新日 2016-12-14 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Molecular insights into protein synthesis with proline residues. EMBO Rep., 17, 2016
5T62	Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 Complex 分子名称: 25S Ribosomal RNA, 5.8S Ribosomal RNA, 5S Ribosomal RNA, ... 著者 Malyutin, A.G, Musalgaonkar, S, Patchett, S, Frank, J, Johnson, A.W. 登録日 2016-09-01 公開日 2017-02-08 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis. EMBO J., 36, 2017

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