PDB: 8880 件ウェブページステータス検索Chemie searchBIRD

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3D9P	Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the Carboxy-Terminal Domain of RNA-Polymerase II 分子名称: CTD-PEPTIDE, RNA-binding protein 16, SULFATE ION 著者 Becker, R, Loll, B, Meinhart, A. 登録日 2008-05-27 公開日 2008-06-10 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Snapshots of the RNA Processing Factor SCAF8 Bound to Different Phosphorylated Forms of the Carboxyl-terminal Domain of RNA Polymerase II. J.Biol.Chem., 283, 2008
3D9J	Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the Carboxy-Terminal Domain of RNA-Polymerase II 分子名称: AMMONIUM ION, GLYCEROL, RNA-binding protein 16, ... 著者 Becker, R, Loll, B, Meinhart, A. 登録日 2008-05-27 公開日 2008-06-10 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Snapshots of the RNA Processing Factor SCAF8 Bound to Different Phosphorylated Forms of the Carboxyl-terminal Domain of RNA Polymerase II. J.Biol.Chem., 283, 2008
3D9N	Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the Carboxy-Terminal Domain of RNA-Polymerase II 分子名称: CTD-PEPTIDE, RNA-binding protein 16, SULFATE ION 著者 Becker, R, Loll, B, Meinhart, A. 登録日 2008-05-27 公開日 2008-06-10 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Snapshots of the RNA Processing Factor SCAF8 Bound to Different Phosphorylated Forms of the Carboxyl-terminal Domain of RNA Polymerase II. J.Biol.Chem., 283, 2008
3D9I	Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the Carboxy-Terminal Domain of RNA-Polymerase II 分子名称: AMMONIUM ION, GLYCEROL, RNA-binding protein 16, ... 著者 Becker, R, Loll, B, Meinhart, A. 登録日 2008-05-27 公開日 2008-06-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.907 Å) 主引用文献 Snapshots of the RNA Processing Factor SCAF8 Bound to Different Phosphorylated Forms of the Carboxyl-terminal Domain of RNA Polymerase II. J.Biol.Chem., 283, 2008
3D9O	Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the Carboxy-Terminal Domain of RNA-Polymerase II 分子名称: AMMONIUM ION, CTD-PEPTIDE, RNA-binding protein 16, ... 著者 Becker, R, Loll, B, Meinhart, A. 登録日 2008-05-27 公開日 2008-06-10 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Snapshots of the RNA Processing Factor SCAF8 Bound to Different Phosphorylated Forms of the Carboxyl-terminal Domain of RNA Polymerase II. J.Biol.Chem., 283, 2008
3D9M	Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the Carboxy-Terminal Domain of RNA-Polymerase II 分子名称: AMMONIUM ION, CTD-PEPTIDE, RNA-binding protein 16, ... 著者 Becker, R, Loll, B, Meinhart, A. 登録日 2008-05-27 公開日 2008-06-10 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Snapshots of the RNA Processing Factor SCAF8 Bound to Different Phosphorylated Forms of the Carboxyl-terminal Domain of RNA Polymerase II. J.Biol.Chem., 283, 2008
3D9L	Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the Carboxy-Terminal Domain of RNA-Polymerase II 分子名称: ACETATE ION, CTD-PEPTIDE, GLYCEROL, ... 著者 Becker, R, Loll, B, Meinhart, A. 登録日 2008-05-27 公開日 2008-06-10 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Snapshots of the RNA Processing Factor SCAF8 Bound to Different Phosphorylated Forms of the Carboxyl-terminal Domain of RNA Polymerase II. J.Biol.Chem., 283, 2008
7O4L	Yeast TFIIH in the expanded state within the pre-initiation complex 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P. 登録日 2021-04-06 公開日 2021-06-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening. Cell, 184, 2021
7O4K	Yeast TFIIH in the contracted state within the pre-initiation complex 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P. 登録日 2021-04-06 公開日 2021-06-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening. Cell, 184, 2021
9JA1	The RNA polymerase II elongation complex from Saccharomyces cerevisiae 分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(P*GP*CP*TP*CP*CP*TP*TP*CP*TP*CP*CP*CP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*T)-3'), DNA (5'-D(P*TP*GP*GP*GP*AP*GP*AP*AP*GP*GP*AP*GP*C)-3'), ... 著者 Yi, G, Ma, J, Zhang, P. 登録日 2024-08-23 公開日 2024-09-04 実験手法 ELECTRON MICROSCOPY (2.98 Å) 主引用文献 The RNA polymerase II elongation complex from Saccharomyces cerevisiae To Be Published
6GYM	Structure of a yeast closed complex with distorted DNA (CCdist) 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Dienemann, C, Schwalb, B, Schilbach, S, Cramer, P. 登録日 2018-06-30 公開日 2018-12-05 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (6.7 Å) 主引用文献 Promoter Distortion and Opening in the RNA Polymerase II Cleft. Mol. Cell, 73, 2019
6GYK	Structure of a yeast closed complex (core CC1) 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Dienemann, C, Schwalb, B, Schilbach, S, Cramer, P. 登録日 2018-06-30 公開日 2018-12-05 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (5.1 Å) 主引用文献 Promoter Distortion and Opening in the RNA Polymerase II Cleft. Mol. Cell, 73, 2019
6GYL	Structure of a yeast closed complex with distorted DNA (core CCdist) 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Dienemann, C, Schwalb, B, Schilbach, S, Cramer, P. 登録日 2018-06-30 公開日 2018-12-05 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Promoter Distortion and Opening in the RNA Polymerase II Cleft. Mol. Cell, 73, 2019
7MEI	Composite structure of EC+EC 分子名称: DNA (74-MER), DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Yang, C, Murakami, K. 登録日 2021-04-06 公開日 2022-03-02 実験手法 ELECTRON MICROSCOPY (3.54 Å) 主引用文献 Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II. Mol.Cell, 82, 2022
7MKA	Structure of EC+EC (leading EC-focused) 分子名称: DNA (40-MER), DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Yang, C, Murakami, K. 登録日 2021-04-22 公開日 2022-04-27 最終更新日 2023-05-17 実験手法 ELECTRON MICROSCOPY (3.54 Å) 主引用文献 Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II. Mol.Cell, 82, 2022
7MK9	Complex structure of trailing EC of EC+EC (trailing EC-focused) 分子名称: DNA (40-MER), DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Yang, C, Murakami, K. 登録日 2021-04-22 公開日 2022-04-27 最終更新日 2023-05-17 実験手法 ELECTRON MICROSCOPY (3.54 Å) 主引用文献 Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II. Mol.Cell, 82, 2022
8OEU	Structure of the mammalian Pol II-SPT6 complex (composite structure, Structure 4) 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Chen, Y, Kokic, G, Dienemann, C, Dybkov, O, Urlaub, H, Cramer, P. 登録日 2023-03-13 公開日 2023-10-18 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (3.04 Å) 主引用文献 Structure of the transcribing RNA polymerase II-Elongin complex. Nat.Struct.Mol.Biol., 30, 2023
8OF0	Structure of the mammalian Pol II-SPT6-Elongin complex, Structure 1 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Chen, Y, Kokic, G, Dienemann, C, Dybkov, O, Urlaub, H, Cramer, P. 登録日 2023-03-13 公開日 2023-10-18 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (3.05 Å) 主引用文献 Structure of the transcribing RNA polymerase II-Elongin complex. Nat.Struct.Mol.Biol., 30, 2023
8OEV	Structure of the mammalian Pol II-SPT6-Elongin complex, lacking ELOA latch (composite structure, structure 3) 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Chen, Y, Kokic, G, Dienemann, C, Dybkov, O, Urlaub, H, Cramer, P. 登録日 2023-03-13 公開日 2023-10-18 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (2.86 Å) 主引用文献 Structure of the transcribing RNA polymerase II-Elongin complex. Nat.Struct.Mol.Biol., 30, 2023
8OEW	Structure of the mammalian Pol II-Elongin complex, lacking the ELOA latch (composite structure, structure 2) 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Chen, Y, Kokic, G, Dienemann, C, Dybkov, O, Urlaub, H, Cramer, P. 登録日 2023-03-13 公開日 2023-10-18 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structure of the transcribing RNA polymerase II-Elongin complex. Nat.Struct.Mol.Biol., 30, 2023
8UI0	Structure of poised transcription complex Pol II-DSIF-NELF - pre-translocated 分子名称: DNA, DNA (38-MER), DNA-directed RNA polymerase II subunit E, ... 著者 Vos, S.M, Su, B.G. 登録日 2023-10-09 公開日 2024-03-20 最終更新日 2024-09-11 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Distinct negative elongation factor conformations regulate RNA polymerase II promoter-proximal pausing. Mol.Cell, 84, 2024
8UHG	Structure of paused transcription complex Pol II-DSIF-NELF - poised post-translocated 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Vos, S.M, Su, B.G. 登録日 2023-10-09 公開日 2024-03-20 最終更新日 2024-04-17 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Distinct negative elongation factor conformations regulate RNA polymerase II promoter-proximal pausing. Mol.Cell, 84, 2024
8UHA	Structure of paused transcription complex Pol II-DSIF-NELF - tilted 分子名称: DNA (28-MER), DNA (38-MER), DNA-directed RNA polymerase II subunit E, ... 著者 Vos, S.M, Su, B.G. 登録日 2023-10-08 公開日 2024-03-20 最終更新日 2024-09-11 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Distinct negative elongation factor conformations regulate RNA polymerase II promoter-proximal pausing. Mol.Cell, 84, 2024
3J1N	Cryo-EM map of a yeast minimal preinitiation complex interacting with the Mediator Head module 分子名称: DNA-directed RNA polymerase II subunit RPABC1, DNA-directed RNA polymerase II subunit RPABC2, DNA-directed RNA polymerase II subunit RPABC3, ... 著者 Asturias, F.J, Imasaki, T. 登録日 2012-03-29 公開日 2013-03-06 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (16 Å) 主引用文献 Interaction of the mediator head module with RNA polymerase II. Structure, 20, 2012
8UHD	Structure of paused transcription complex Pol II-DSIF-NELF - post-translocated 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB7, ... 著者 Su, B.G, Vos, S.M. 登録日 2023-10-08 公開日 2024-03-20 最終更新日 2024-09-11 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Distinct negative elongation factor conformations regulate RNA polymerase II promoter-proximal pausing. Mol.Cell, 84, 2024

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