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5DTH
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Crystal structure of MUPP1 PDZ8 domain from rattus norvegicus
分子名称: Multiple PDZ domain protein
著者Li, J, Lv, Y, Zhu, H, Liu, W.
登録日2015-09-18
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure and biochemical characteristics of MUPP1 PDZ8 domain from rattus norregicus
To Be Published
5E1Y
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BU of 5e1y by Molmil
PDZ2 of LNX2 at 277K, model with alternate conformations
分子名称: Ligand of Numb protein X 2
著者Hekstra, D.R, White, K.I, Socolich, M.A, Ranganathan, R.
登録日2015-09-30
公開日2016-12-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.011 Å)
主引用文献Electric-field-stimulated protein mechanics.
Nature, 540, 2016
5E22
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BU of 5e22 by Molmil
The second PDZ domain of Ligand of Numb protein X 2 in the presence of an electric field of ~1 MV/cm along the crystallographic x axis, with eightfold extrapolation of structure factor differences.
分子名称: GLYCEROL, Ligand of Numb protein X 2
著者Hekstra, D.R, White, K.I, Socolich, M.A, Henning, R.W, Srajer, V, Ranganathan, R.
登録日2015-09-30
公開日2016-12-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.797 Å)
主引用文献Electric-field-stimulated protein mechanics.
Nature, 540, 2016
5E11
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BU of 5e11 by Molmil
Second PDZ domain of Ligand of Numb protein X 2 by Laue crystallography (no electric field)
分子名称: Ligand of Numb protein X 2
著者Hekstra, D.R, White, K.I, Socolich, M.A, Henning, R.W, Srajer, V, Ranganathan, R.
登録日2015-09-29
公開日2016-12-07
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Electric-field-stimulated protein mechanics.
Nature, 540, 2016
5ELQ
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BU of 5elq by Molmil
Crystal structure of the SNX27 PDZ domain bound to the C-terminal DGKzeta PDZ binding motif
分子名称: GLU-ASP-GLN-GLU-THR-ALA-VAL, Sorting nexin-27, TETRAETHYLENE GLYCOL
著者Collins, B.M, Clairfeuille, T.
登録日2015-11-05
公開日2016-09-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献A molecular code for endosomal recycling of phosphorylated cargos by the SNX27-retromer complex.
Nat.Struct.Mol.Biol., 23, 2016
5EM9
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BU of 5em9 by Molmil
Crystal structure of the SNX27 PDZ domain bound to the phosphorylated C-terminal 5HT4(a)R PDZ binding motif
分子名称: SEP-LEU-GLU-SER-CYS-PHE, Sorting nexin-27
著者Collins, B.M, Clairfeuille, T.
登録日2015-11-06
公開日2016-09-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A molecular code for endosomal recycling of phosphorylated cargos by the SNX27-retromer complex.
Nat.Struct.Mol.Biol., 23, 2016
5EMB
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BU of 5emb by Molmil
Crystal structure of the SNX27 PDZ domain bound to the C-terminal phosphorylated PTHR PDZ binding motif
分子名称: GLU-GLU-TRP-SEP-THR-VAL-MET, Sorting nexin-27
著者Collins, B.M, Clairfeuille, T.
登録日2015-11-06
公開日2016-09-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (0.85 Å)
主引用文献A molecular code for endosomal recycling of phosphorylated cargos by the SNX27-retromer complex.
Nat.Struct.Mol.Biol., 23, 2016
3CYY
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BU of 3cyy by Molmil
The crystal structure of ZO-1 PDZ2 in complex with the Cx43 peptide
分子名称: Tight junction protein ZO-1, peptide from Gap junction alpha-1 protein
著者Pan, L, Zhang, M.
登録日2008-04-27
公開日2008-09-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Domain-swapped dimerization of ZO-1 PDZ2 generates specific and regulatory connexin43-binding sites
Embo J., 27, 2008
3CH8
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BU of 3ch8 by Molmil
The crystal structure of PDZ-Fibronectin fusion protein
分子名称: C-terminal octapeptide from protein ARVCF, MAGNESIUM ION, fusion protein PDZ-Fibronectin,Fibronectin
著者Makabe, K, Huang, J, Koide, A, Koide, S.
登録日2008-03-08
公開日2009-03-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for exquisite specificity of affinity clamps, synthetic binding proteins generated through directed domain-interface evolution.
J.Mol.Biol., 392, 2009
5EMA
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BU of 5ema by Molmil
Crystal structure of the SNX27 PDZ domain bound to the phosphorylated C-terminal LRRC3B PDZ binding motif
分子名称: ASP-ASP-ILE-SEP-THR-VAL-VAL, GLYCEROL, Sorting nexin-27
著者Collins, B.M, Clairfeuille, T.
登録日2015-11-06
公開日2016-09-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献A molecular code for endosomal recycling of phosphorylated cargos by the SNX27-retromer complex.
Nat.Struct.Mol.Biol., 23, 2016
3FY5
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BU of 3fy5 by Molmil
Dishevelled PDZ domain homodimer
分子名称: Segment polarity protein dishevelled homolog DVL-2
著者Earnest, T, Friedland, N, Hung, L.-W, Moon, R.
登録日2009-01-21
公開日2009-09-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献

3DJ1
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BU of 3dj1 by Molmil
crystal structure of TIP-1 wild type
分子名称: SULFATE ION, Tax1-binding protein 3
著者Shen, Y.
登録日2008-06-21
公開日2008-10-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Basis of beta-Catenin Recognition by Tax-interacting Protein-1
J.Mol.Biol., 384, 2008
3E17
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BU of 3e17 by Molmil
Crystal structure of the second PDZ domain from human Zona Occludens-2
分子名称: Tight junction protein ZO-2
著者Chen, H, Tong, S.L, Teng, M.K, Niu, L.W.
登録日2008-08-01
公開日2009-07-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure of the second PDZ domain from human zonula occludens 2
Acta Crystallogr.,Sect.F, 65, 2009
5EYZ
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BU of 5eyz by Molmil
CRYSTAL STRUCTURE OF THE PTPN4 PDZ DOMAIN COMPLEXED WITH THE TAILORED PEPTIDE CYTO8-RETEV
分子名称: CHLORIDE ION, CYTO8-RETEV, Tyrosine-protein phosphatase non-receptor type 4
著者Maisonneuve, P, Vaney, M.C, Babault, B, Caillet-Saguy, C, Lafon, M, Delepierre, M, Cordier, F, Wolff, N.
登録日2015-11-26
公開日2016-06-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Molecular Basis of the Interaction of the Human Protein Tyrosine Phosphatase Non-receptor Type 4 (PTPN4) with the Mitogen-activated Protein Kinase p38 gamma.
J.Biol.Chem., 291, 2016
5F67
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BU of 5f67 by Molmil
An exquisitely specific PDZ/target recognition revealed by the structure of INAD PDZ3 in complex with TRP channel tail
分子名称: Inactivation-no-after-potential D protein, TRP C terminal Tail
著者Ye, F, Shang, Y, Liu, W, Zhang, M.
登録日2015-12-05
公開日2016-02-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献An Exquisitely Specific PDZ/Target Recognition Revealed by the Structure of INAD PDZ3 in Complex with TRP Channel Tail
Structure, 24, 2016
5EZ0
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BU of 5ez0 by Molmil
CRYSTAL STRUCTURE OF THE PTPN4 PDZ DOMAIN COMPLEXED WITH THE PDZ BINDING MOTIF OF THE MITOGEN ACTIVATED PROTEIN KINASE P38GAMMA.
分子名称: Mitogen-activated protein kinase 12, SULFATE ION, Tyrosine-protein phosphatase non-receptor type 4
著者Maisonneuve, P, Vaney, M.C, Caillet-Saguy, C, Lafon, M, Delepierre, M, Cordier, F, Wolff, N.
登録日2015-11-26
公開日2016-06-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Molecular Basis of the Interaction of the Human Protein Tyrosine Phosphatase Non-receptor Type 4 (PTPN4) with the Mitogen-activated Protein Kinase p38 gamma.
J.Biol.Chem., 291, 2016
5FB8
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BU of 5fb8 by Molmil
Structure of Interleukin-16 bound to the 14.1 antibody
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Anti-IL-16 antibody 14.1 Fab domain Heavy Chain, ...
著者Hall, G, Cowan, R, Bayliss, R, Carr, M.
登録日2015-12-14
公開日2016-06-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structure of a Potential Therapeutic Antibody Bound to Interleukin-16 (IL-16): MECHANISTIC INSIGHTS AND NEW THERAPEUTIC OPPORTUNITIES.
J.Biol.Chem., 291, 2016
3GGE
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BU of 3gge by Molmil
Crystal structure of the PDZ domain of PDZ domain-containing protein GIPC2
分子名称: GLYCEROL, PDZ domain-containing protein GIPC2, SULFATE ION
著者Chaikuad, A, Hozjan, V, Yue, W, Cooper, C, Elkins, J, Pike, A.C.W, Roos, A.K, Filippakopoulos, P, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Oppermann, U, Structural Genomics Consortium (SGC)
登録日2009-02-27
公開日2009-03-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the PDZ domain of PDZ domain-containing protein GIPC2
To be Published
4JOG
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BU of 4jog by Molmil
CFTR Associated Ligand (CAL) PDZ domain bound to peptide V-iCAL36 (ANSRVPTSII)
分子名称: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, V-iCAL36 peptide
著者Amacher, J.F, Madden, D.R.
登録日2013-03-18
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.465 Å)
主引用文献Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses.
Structure, 22, 2014
4K78
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BU of 4k78 by Molmil
CFTR Associated Ligand (CAL) E317A PDZ domain bound to peptide iCAL36-QDTRL (ANSRWQDTRL)
分子名称: Golgi-associated PDZ and coiled-coil motif-containing protein, iCAL36-QDTRL peptide
著者Amacher, J.F, Madden, D.R.
登録日2013-04-16
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses.
Structure, 22, 2014
5GLJ
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BU of 5glj by Molmil
Crystal Structure of PDZ1 Domain of Human Protein Tyrosine Phosphatase PTP-Bas
分子名称: CHLORIDE ION, Tyrosine-protein phosphatase non-receptor type 13
著者Lee, S.O, Ku, B, Chi, S.W.
登録日2016-07-11
公開日2016-11-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献High-resolution crystal structure of the PDZ1 domain of human protein tyrosine phosphatase PTP-Bas.
Biochem.Biophys.Res.Commun., 478, 2016
5HET
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BU of 5het by Molmil
The third PDZ domain from the synaptic protein PSD-95 (G330T mutant)
分子名称: Disks large homolog 4
著者White, K.I, Raman, A.S, Ranganathan, R.
登録日2016-01-06
公開日2016-11-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Origins of Allostery and Evolvability in Proteins: A Case Study.
Cell(Cambridge,Mass.), 166, 2016
5HFD
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BU of 5hfd by Molmil
The third PDZ domain from the synaptic protein PSD-95 (G330T, H372A double mutant)
分子名称: Disks large homolog 4
著者White, K.I, Raman, A.S, Ranganathan, R.
登録日2016-01-06
公開日2017-01-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The third PDZ domain from the synaptic protein PSD-95 (G330T, H372A double mutant)
To Be Published
5HFB
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BU of 5hfb by Molmil
The third PDZ domain from the synaptic protein PSD-95 (H372A mutant) in complex with a C-terminal peptide derived from CRIPT
分子名称: Cysteine-rich PDZ-binding protein, Disks large homolog 4
著者White, K.I, Raman, A.S, Ranganathan, R.
登録日2016-01-06
公開日2016-11-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.616 Å)
主引用文献Origins of Allostery and Evolvability in Proteins: A Case Study.
Cell(Cambridge,Mass.), 166, 2016
4JL7
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BU of 4jl7 by Molmil
Crystal Structure of the Chemokine Receptor CXCR2 in Complex with the First PDZ Domain of NHERF1
分子名称: CHLORIDE ION, Na(+)/H(+) exchange regulatory cofactor NHE-RF1
著者Lu, G, Wu, Y, Jiang, Y, Brunzelle, J, Sirinupong, N, Li, C, Yang, Z.
登録日2013-03-12
公開日2013-10-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Structural Insights into Neutrophilic Migration Revealed by the Crystal Structure of the Chemokine Receptor CXCR2 in Complex with the First PDZ Domain of NHERF1.
Plos One, 8, 2013

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