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3EOF
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BU of 3eof by Molmil
Crystal structure of putative oxidoreductase (YP_213212.1) from Bacteroides fragilis NCTC 9343 at 1.99 A resolution
分子名称: FLAVIN MONONUCLEOTIDE, Putative oxidoreductase
著者Joint Center for Structural Genomics (JCSG)
登録日2008-09-26
公開日2008-10-14
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Crystal structure of putative oxidoreductase (YP_213212.1) from Bacteroides fragilis NCTC 9343 at 1.99 A resolution
To be published
3ETN
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BU of 3etn by Molmil
Crystal structure of putative phosphosugar isomerase involved in capsule formation (YP_209877.1) from Bacteroides fragilis NCTC 9343 at 1.70 A resolution
分子名称: 1,2-ETHANEDIOL, CYTIDINE 5'-MONOPHOSPHATE 3-DEOXY-BETA-D-GULO-OCT-2-ULO-PYRANOSONIC ACID, putative phosphosugar isomerase involved in capsule formation
著者Joint Center for Structural Genomics (JCSG)
登録日2008-10-08
公開日2008-10-21
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural analysis of arabinose-5-phosphate isomerase from Bacteroides fragilis and functional implications.
Acta Crystallogr.,Sect.D, 70, 2014
3EU8
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BU of 3eu8 by Molmil
Crystal structure of putative glucoamylase (YP_210071.1) from Bacteroides fragilis NCTC 9343 at 2.12 A resolution
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, POTASSIUM ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2008-10-09
公開日2008-10-21
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Crystal structure of putative glucoamylase (YP_210071.1) from Bacteroides fragilis NCTC 9343 at 2.12 A resolution
To be published
3E8V
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BU of 3e8v by Molmil
Crystal structure of a possible transglutaminase-family protein proteolytic fragment from Bacteroides fragilis
分子名称: Possible transglutaminase-family protein, UNKNOWN LIGAND
著者Bonanno, J.B, Rutter, M, Bain, K.T, Hu, S, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-08-20
公開日2008-09-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of a possible transglutaminase-family protein proteolytic fragment from Bacteroides fragilis
To be Published
3GWY
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BU of 3gwy by Molmil
Crystal structure of putative CTP pyrophosphohydrolase from Bacteroides fragilis
分子名称: Putative CTP pyrophosphohydrolase
著者Patskovsky, Y, Romero, R, Gilmore, M, Do, J, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-04-01
公開日2009-04-14
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Ctp Pyrophosphohydrolase from Bacteroides fragilis
To be Published
8QPP
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BU of 8qpp by Molmil
Bacillus subtilis MutS2-collided disome complex (stalled 70S)
分子名称: 16S rRNA (1533-MER), 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Park, E, Mackens-Kiani, T, Berhane, R, Esser, H, Erdenebat, C, Burroughs, A.M, Berninghausen, O, Aravind, L, Beckmann, R, Green, R, Buskirk, A.R.
登録日2023-10-02
公開日2023-12-27
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献B. subtilis MutS2 splits stalled ribosomes into subunits without mRNA cleavage.
Embo J., 43, 2024
8H3X
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BU of 8h3x by Molmil
Bacteroide Fragilis Toxin in complex with nanobody 282
分子名称: Fragilysin, ZINC ION, nanobody 282
著者Wen, Y, Guo, Y.
登録日2022-10-09
公開日2023-02-08
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Screening and epitope characterization of diagnostic nanobody against total and activated Bacteroides fragilis toxin.
Front Immunol, 14, 2023
8H3Y
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BU of 8h3y by Molmil
Bacteroide Fragilis Toxin in complex with nanobody 327
分子名称: Fragilysin, Nanobody 327, ZINC ION
著者Wen, Y, Guo, Y.
登録日2022-10-09
公開日2023-02-08
最終更新日2023-03-15
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Screening and epitope characterization of diagnostic nanobody against total and activated Bacteroides fragilis toxin.
Front Immunol, 14, 2023
4OGZ
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BU of 4ogz by Molmil
Crystal structure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution
分子名称: DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, Putative alpha-galactosidase/melibiase, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2014-01-16
公開日2014-02-05
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution
To be published
4P3V
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BU of 4p3v by Molmil
Crystal structure of the E. coli HU beta2 protein
分子名称: DNA-binding protein HU-beta, LITHIUM ION
著者Le Meur, R, Coste, F, Castaing, B.
登録日2014-03-10
公開日2015-04-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal structure of the E. coli HU beta2 protein
To Be Published
6WZL
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BU of 6wzl by Molmil
LY3041658 Fab bound to CXCL7
分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, C-X-C motif chemokine 7, LY3041658 Fab heavy chain, ...
著者Durbin, J.D, Druzina, Z.
登録日2020-05-14
公開日2020-11-25
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Discovery and characterization of a neutralizing pan-ELR+CXC chemokine monoclonal antibody.
Mabs, 12
6WZJ
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BU of 6wzj by Molmil
LY3041658 Fab bound to CXCL2
分子名称: C-X-C motif chemokine 2, LY3041658 Fab Heavy Chain, LY3041658 Fab Light Chain
著者Durbin, J.D, Druzina, Z.
登録日2020-05-14
公開日2020-11-25
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Discovery and characterization of a neutralizing pan-ELR+CXC chemokine monoclonal antibody.
Mabs, 12
8WEN
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BU of 8wen by Molmil
Bacteroides fragilis toxin 2
分子名称: Metalloprotease, SODIUM ION, ZINC ION
著者Guo, Y, Wen, Y.
登録日2023-09-18
公開日2024-09-25
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Bacteroides fragilis toxin 2
To Be Published
4LQL
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BU of 4lql by Molmil
Crystal structure of L-arabinose isomerase from Lactobacillus fermentum CGMCC2921
分子名称: L-arabinose isomerase
著者Xu, Z.
登録日2013-07-19
公開日2014-07-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.232 Å)
主引用文献Crystal structure of L-arabinose isomerase from Lactobacillus fermentum CGMCC2921
to be published
6WZK
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BU of 6wzk by Molmil
LY3041658 Fab bound to CXCL3
分子名称: 1,2-ETHANEDIOL, ACETATE ION, C-X-C motif chemokine 3, ...
著者Durbin, J.D, Druzina, Z.
登録日2020-05-14
公開日2020-11-25
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Discovery and characterization of a neutralizing pan-ELR+CXC chemokine monoclonal antibody.
Mabs, 12
7NWI
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BU of 7nwi by Molmil
Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S
分子名称: 18S ribosomal RNA, 28S ribosomal RNA+BlaS, 40S ribosomal protein S11, ...
著者Powers, K.T, Yadav, S.K.N, Bufton, J.C, Schaffitzel, C.
登録日2021-03-16
公開日2021-07-07
最終更新日2023-01-11
実験手法ELECTRON MICROSCOPY (3.13 Å)
主引用文献Blasticidin S inhibits mammalian translation and enhances production of protein encoded by nonsense mRNA.
Nucleic Acids Res., 49, 2021
5YYS
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BU of 5yys by Molmil
Cryo-EM structure of L-fucokinase, GDP-fucose pyrophosphorylase (FKP)in Bacteroides fragilis
分子名称: L-fucokinase, L-fucose-1-P guanylyltransferase
著者Wang, J, Hu, H, Liu, Y, Zhou, Q, Wu, P, Yan, N, Wang, H.W, Wu, J.W, Sun, L.
登録日2017-12-11
公開日2018-12-12
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-EM structure of L-fucokinase/GDP-fucose pyrophosphorylase (FKP) in Bacteroides fragilis.
Protein Cell, 10, 2019
1LR1
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BU of 1lr1 by Molmil
Solution Structure of the Oligomerization Domain of the Bacterial Chromatin-Structuring Protein H-NS
分子名称: dna-binding protein h-ns
著者Esposito, D, Petrovic, A, Harris, R, Ono, S, Eccleston, J, Mbabaali, A, Haq, I, Higgins, C.F, Hinton, J.C.D, Driscoll, P.C, Ladbury, J.E.
登録日2002-05-14
公開日2003-01-14
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献H-NS Oligomerization Domain Structure Reveals the Mechanism for High Order Self-association of the Intact Protein
J.Mol.Biol., 324, 2002
1MUL
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BU of 1mul by Molmil
Crystal structure of the E. coli HU alpha2 protein
分子名称: DNA binding protein HU-alpha
著者Ramstein, J, Hervouet, N, Coste, F, Zelwer, C, Oberto, J, Castaing, B.
登録日2002-09-24
公開日2003-08-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Evidence of a Thermal Unfolding Dimeric Intermediate for the Escherichia coli Histone-like HU Proteins: Thermodynamics and Structure.
J.Mol.Biol., 331, 2003
1NI8
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BU of 1ni8 by Molmil
H-NS dimerization motif
分子名称: DNA-binding protein H-NS
著者Bloch, V, Yang, Y, Margeat, E, Chavanieu, A, Aug, M.T, Robert, B, Arold, S, Rimsky, S, Kochoyan, M.
登録日2002-12-22
公開日2003-02-18
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The H-NS dimerisation domain defines a new fold contributing to DNA recognition
Nat.Struct.Biol., 10, 2003
3GJO
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BU of 3gjo by Molmil
Crystal structure of human EB1 in complex with microtubule Tip localization signal peptide of MACF
分子名称: Dystonin, Microtubule-associated protein RP/EB family member 1
著者Honnappa, S, Steinmetz, M.O.
登録日2009-03-09
公開日2009-08-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献An EB1-binding motif acts as a microtubule tip localization signal
Cell(Cambridge,Mass.), 138, 2009
2ZNB
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BU of 2znb by Molmil
METALLO-BETA-LACTAMASE (CADMIUM-BOUND FORM)
分子名称: CADMIUM ION, METALLO-BETA-LACTAMASE, SODIUM ION
著者Concha, N.O, Herzberg, O.
登録日1997-10-14
公開日1998-01-28
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structures of the cadmium- and mercury-substituted metallo-beta-lactamase from Bacteroides fragilis.
Protein Sci., 6, 1997
7YVC
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BU of 7yvc by Molmil
Aplysia californica FaNaC in apo state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Chen, Q.F, Liu, F.L, Dang, Y, Feng, H, Zhang, Z, Ye, S.
登録日2022-08-19
公開日2023-08-09
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure and mechanism of a neuropeptide-activated channel in the ENaC/DEG superfamily.
Nat.Chem.Biol., 19, 2023
7YVB
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BU of 7yvb by Molmil
Aplysia californica FaNaC in ligand bound state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FMRFamide-gated Na+ channel, ...
著者Chen, Q.F, Liu, F.L, Dang, Y, Feng, H, Zhang, Z, Ye, S.
登録日2022-08-19
公開日2023-08-09
最終更新日2023-10-11
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structure and mechanism of a neuropeptide-activated channel in the ENaC/DEG superfamily.
Nat.Chem.Biol., 19, 2023
4PY9
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Crystal structure of an exopolyphosphatase-related protein from Bacteroides Fragilis. Northeast Structural Genomics target BFR192
分子名称: PHOSPHATE ION, Putative exopolyphosphatase-related protein, SODIUM ION
著者Seetharaman, J, Abashidze, M, Wang, H, Janjua, H, Foote, E.L, Xiao, R, Nair, R, Everett, J.K, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2014-03-26
公開日2014-06-25
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of an exopolyphosphatase-related protein from Bacteroides Fragilis. Northeast Structural Genomics target BFR192
To be Published

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