Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 75 件

2PVE
DownloadVisualize
BU of 2pve by Molmil
NMR and X-ray Analysis of Structural Additivity in Metal Binding Site-Swapped Hybrids of Rubredoxin
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Rubredoxin, ...
著者LeMaster, D.M, Anderson, J.S, Wang, L, Guo, Y, Li, H, Hernandez, G.
登録日2007-05-09
公開日2007-12-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (0.79 Å)
主引用文献NMR and X-ray analysis of structural additivity in metal binding site-swapped hybrids of rubredoxin.
Bmc Struct.Biol., 7, 2007
1IRO
DownloadVisualize
BU of 1iro by Molmil
RUBREDOXIN (OXIDIZED, FE(III)) AT 1.1 ANGSTROMS RESOLUTION
分子名称: FE (III) ION, RUBREDOXIN
著者Dauter, Z, Wilson, K.S, Sieker, L.C, Moulis, J.M, Meyer, J.
登録日1995-12-13
公開日1996-04-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Zinc- and iron-rubredoxins from Clostridium pasteurianum at atomic resolution: a high-precision model of a ZnS4 coordination unit in a protein.
Proc.Natl.Acad.Sci.USA, 93, 1996
4RXN
DownloadVisualize
BU of 4rxn by Molmil
CRYSTALLOGRAPHIC REFINEMENT OF RUBREDOXIN AT 1.2 ANGSTROMS RESOLUTION
分子名称: FE (III) ION, RUBREDOXIN
著者Watenpaugh, K.D, Sieker, L.C, Jensen, L.H.
登録日1984-10-15
公開日1985-04-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystallographic refinement of rubredoxin at 1 x 2 A degrees resolution.
J.Mol.Biol., 138, 1980
1IRN
DownloadVisualize
BU of 1irn by Molmil
RUBREDOXIN (ZN-SUBSTITUTED) AT 1.2 ANGSTROMS RESOLUTION
分子名称: RUBREDOXIN, ZINC ION
著者Dauter, Z, Wilson, K.S, Sieker, L.C, Moulis, J.M, Meyer, J.
登録日1995-12-13
公開日1996-04-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Zinc- and iron-rubredoxins from Clostridium pasteurianum at atomic resolution: a high-precision model of a ZnS4 coordination unit in a protein.
Proc.Natl.Acad.Sci.USA, 93, 1996
5RXN
DownloadVisualize
BU of 5rxn by Molmil
COMBINED CRYSTALLOGRAPHIC REFINEMENT AND ENERGY MINIMIZATION OF RUBREDOXIN AT 1.2 ANGSTROM RESOLUTION
分子名称: FE (III) ION, RUBREDOXIN
著者Watenpaugh, K.D.
登録日1984-10-15
公開日1985-04-01
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Combined Crystallographic Refinement and Energy Minimization of Rubredoxin at 1.2 Angstrom Resolution
To be Published
5YD4
DownloadVisualize
BU of 5yd4 by Molmil
Crystal structure of the scFv antibody 4B08 with epitope peptide (mutation T6A)
分子名称: Epitope peptide (mutation T6A), SULFATE ION, scFv 4B08
著者Caaveiro, J.M.M, Miyanabe, K, Tsumoto, K.
登録日2017-09-11
公開日2018-06-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Intramolecular H-bonds govern the recognition of a flexible peptide by an antibody
J. Biochem., 164, 2018
5YD3
DownloadVisualize
BU of 5yd3 by Molmil
Crystal structure of the scFv antibody 4B08 with epitope peptide
分子名称: Epitope peptide, GLYCEROL, SULFATE ION, ...
著者Caaveiro, J.M.M, Miyanabe, K, Tsumoto, K.
登録日2017-09-11
公開日2018-06-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Intramolecular H-bonds govern the recognition of a flexible peptide by an antibody
J. Biochem., 164, 2018
1SMM
DownloadVisualize
BU of 1smm by Molmil
Crystal Structure of Cp Rd L41A mutant in oxidized state
分子名称: FE (III) ION, Rubredoxin, SULFATE ION
著者Park, I.Y, Youn, B, Harley, J.L, Eidsness, M.K, Smith, E, Ichiye, T, Kang, C.
登録日2004-03-09
公開日2004-03-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献The unique hydrogen bonded water in the reduced form of Clostridium pasteurianum rubredoxin and its possible role in electron transfer
J.BIOL.INORG.CHEM., 9, 2004
1SMW
DownloadVisualize
BU of 1smw by Molmil
Crystal Structure of Cp Rd L41A mutant in reduced state 2 (soaked)
分子名称: FE (II) ION, Rubredoxin
著者Park, I.Y, Youn, B, Harley, J.L, Eidsness, M.K, Smith, E, Ichiye, T, Kang, C.
登録日2004-03-09
公開日2004-03-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献The unique hydrogen bonded water in the reduced form of Clostridium pasteurianum rubredoxin and its possible role in electron transfer
J.BIOL.INORG.CHEM., 9, 2004
1SMU
DownloadVisualize
BU of 1smu by Molmil
Crystal Structure of Cp Rd L41A mutant in reduced state 1 (drop-reduced)
分子名称: FE (II) ION, Rubredoxin
著者Park, I.Y, Youn, B, Harley, J.L, Eidsness, M.K, Smith, E, Ichiye, T, Kang, C.
登録日2004-03-09
公開日2004-03-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献The unique hydrogen bonded water in the reduced form of Clostridium pasteurianum rubredoxin and its possible role in electron transfer
J.BIOL.INORG.CHEM., 9, 2004
1R0I
DownloadVisualize
BU of 1r0i by Molmil
cadmium-substituted rubredoxin
分子名称: CADMIUM ION, Rubredoxin
著者Maher, M, Cross, M, Wilce, M.C.J, Guss, J.M, Wedd, A.G.
登録日2003-09-22
公開日2004-02-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Metal-substituted derivatives of the rubredoxin from Clostridium pasteurianum.
Acta Crystallogr.,Sect.D, 60, 2004
1B13
DownloadVisualize
BU of 1b13 by Molmil
CLOSTRIDIUM PASTEURIANUM RUBREDOXIN G10A MUTANT
分子名称: FE (III) ION, PROTEIN (RUBREDOXIN)
著者Maher, M.J, Guss, J.M, Wilce, M.C.J, Wedd, A.G.
登録日1998-11-26
公開日1999-05-27
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Rubredoxin from Clostridium pasteurianum. Structures of G10A, G43A and G10VG43A mutant proteins. Mutation of conserved glycine 10 to valine causes the 9-10 peptide link to invert.
Acta Crystallogr.,Sect.D, 55, 1999
1FHH
DownloadVisualize
BU of 1fhh by Molmil
X-RAY CRYSTAL STRUCTURE OF OXIDIZED RUBREDOXIN
分子名称: FE (III) ION, RUBREDOXIN
著者Min, T, Ergenekan, C.E, Eidsness, M.K, Ichiye, T, Kang, C.
登録日2000-08-01
公開日2001-03-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Leucine 41 is a gate for water entry in the reduction of Clostridium pasteurianum rubredoxin.
Protein Sci., 10, 2001
1FHM
DownloadVisualize
BU of 1fhm by Molmil
X-RAY CRYSTAL STRUCTURE OF REDUCED RUBREDOXIN
分子名称: FE (II) ION, RUBREDOXIN
著者Min, T, Ergenekan, C.E, Eidsness, M.K, Ichiye, T, Kang, C.
登録日2000-08-02
公開日2001-03-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Leucine 41 is a gate for water entry in the reduction of Clostridium pasteurianum rubredoxin.
Protein Sci., 10, 2001
1T9P
DownloadVisualize
BU of 1t9p by Molmil
Crystal Structure of V44A, G45P Cp Rubredoxin
分子名称: FE (III) ION, Rubredoxin
著者Park, I.Y, Eidsness, M.K, Lin, I.J, Gebel, E.B, Youn, B, Harley, J.L, Machonkin, T.E, Frederick, R.O, Markley, J.L, Smith, E.T, Ichiye, T, Kang, C.
登録日2004-05-18
公開日2004-10-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystallographic studies of V44 mutants of Clostridium pasteurianum rubredoxin: Effects of side-chain size on reduction potential.
Proteins, 57, 2004
5YY4
DownloadVisualize
BU of 5yy4 by Molmil
Crystal structure of the scFv antibody 4B08 with sulfated epitope peptide
分子名称: C-C chemokine receptor type 5, CHLORIDE ION, SULFATE ION, ...
著者Caaveiro, J.M.M, Miyanabe, K, Tsumoto, K.
登録日2017-12-07
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Tyrosine Sulfation Restricts the Conformational Ensemble of a Flexible Peptide, Strengthening the Binding Affinity for an Antibody
Biochemistry, 57, 2018
1R0G
DownloadVisualize
BU of 1r0g by Molmil
mercury-substituted rubredoxin
分子名称: MERCURY (II) ION, Rubredoxin
著者Maher, M, Cross, M, Wilce, M.C.J, Guss, J.M, Wedd, A.G.
登録日2003-09-22
公開日2004-02-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Metal-substituted derivatives of the rubredoxin from Clostridium pasteurianum.
Acta Crystallogr.,Sect.D, 60, 2004
1B2J
DownloadVisualize
BU of 1b2j by Molmil
CLOSTRIDIUM PASTEURIANUM RUBREDOXIN G43A MUTANT
分子名称: FE (III) ION, PROTEIN (RUBREDOXIN)
著者Maher, M.J, Guss, J.M, Wilce, M.C.J, Wedd, A.G.
登録日1998-11-27
公開日1999-05-27
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Rubredoxin from Clostridium pasteurianum. Structures of G10A, G43A and G10VG43A mutant proteins. Mutation of conserved glycine 10 to valine causes the 9-10 peptide link to invert.
Acta Crystallogr.,Sect.D, 55, 1999
1R0F
DownloadVisualize
BU of 1r0f by Molmil
Gallium-substituted rubredoxin
分子名称: GALLIUM (III) ION, Rubredoxin
著者Maher, M, Cross, M, Wilce, M.C.J, Guss, J.M, Wedd, A.G.
登録日2003-09-22
公開日2004-02-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Metal-substituted derivatives of the rubredoxin from Clostridium pasteurianum.
Acta Crystallogr.,Sect.D, 60, 2004
1C09
DownloadVisualize
BU of 1c09 by Molmil
RUBREDOXIN V44A CP
分子名称: FE (III) ION, RUBREDOXIN
著者Min, T, Beard, B, Kang, C.
登録日1999-07-15
公開日2001-02-21
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Modulation of the redox potential of the [Fe(SCys)(4)] site in rubredoxin by the orientation of a peptide dipole.
Biochemistry, 38, 1999
1BE7
DownloadVisualize
BU of 1be7 by Molmil
CLOSTRIDIUM PASTEURIANUM RUBREDOXIN C42S MUTANT
分子名称: FE (III) ION, RUBREDOXIN
著者Maher, M, Guss, J.M, Wilce, M, Wedd, A.G.
登録日1998-05-20
公開日1998-09-23
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The Rubredoxin from Clostridium Pasteurianum: Mutation of the Iron Cysteinyl Ligands to Serine. Crystal and Molecular Structures of the Oxidised and Dithionite-Treated Forms of the Cys42Ser Mutant
J.Am.Chem.Soc., 120, 1998
1R0H
DownloadVisualize
BU of 1r0h by Molmil
cobalt-substituted rubredoxin
分子名称: COBALT (II) ION, Rubredoxin
著者Maher, M, Cross, M, Wilce, M.C.J, Guss, J.M, Wedd, A.G.
登録日2003-09-22
公開日2004-02-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Metal-substituted derivatives of the rubredoxin from Clostridium pasteurianum.
Acta Crystallogr.,Sect.D, 60, 2004
3FPU
DownloadVisualize
BU of 3fpu by Molmil
The crystallographic structure of the Complex between Evasin-1 and CCL3
分子名称: C-C motif chemokine 3, Evasin-1, NICKEL (II) ION
著者Shaw, J.P, Dias, J.M.
登録日2009-01-06
公開日2010-01-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Structural basis of chemokine sequestration by a tick chemokine binding protein: the crystal structure of the complex between Evasin-1 and CCL3
Plos One, 4, 2009
1T9Q
DownloadVisualize
BU of 1t9q by Molmil
Crystal Structure of V44L Cp Rubredoxin
分子名称: FE (III) ION, Rubredoxin
著者Park, I.Y, Eidsness, M.K, Lin, I.J, Gebel, E.B, Youn, B, Harley, J.L, Machonkin, T.E, Frederick, R.O, Markley, J.L, Smith, E.T, Ichiye, T, Kang, C.
登録日2004-05-18
公開日2004-10-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic studies of V44 mutants of Clostridium pasteurianum rubredoxin: Effects of side-chain size on reduction potential.
Proteins, 57, 2004
1B2O
DownloadVisualize
BU of 1b2o by Molmil
CLOSTRIDIUM PASTEURIANUM RUBREDOXIN G10VG43A MUTANT
分子名称: FE (III) ION, PROTEIN (RUBREDOXIN)
著者Maher, M.J, Guss, J.M, Wilce, M.C.J, Wedd, A.G.
登録日1998-11-30
公開日1999-05-27
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Rubredoxin from Clostridium pasteurianum. Structures of G10A, G43A and G10VG43A mutant proteins. Mutation of conserved glycine 10 to valine causes the 9-10 peptide link to invert.
Acta Crystallogr.,Sect.D, 55, 1999

 

123>

221716

件を2024-06-26に公開中

PDB statisticsPDBj update infoContact PDBjnumon