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PDB: 284 件

2MOR
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A tensor-free method for the structural and dynamical refinement of proteins using residual dipolar couplings
分子名称: Ubiquitin
著者Camilloni, C, Vendruscolo, M.
登録日2014-04-29
公開日2014-06-25
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A Tensor-Free Method for the Structural and Dynamical Refinement of Proteins using Residual Dipolar Couplings.
J.Phys.Chem.B, 119, 2015
2N2K
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BU of 2n2k by Molmil
Ensemble structure of the closed state of Lys63-linked diubiquitin in the absence of a ligand
分子名称: S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate, ubiquitin
著者Liu, Z, Gong, Z, Tang, C.
登録日2015-05-10
公開日2015-07-08
最終更新日2015-09-23
実験手法SOLUTION NMR
主引用文献Lys63-linked ubiquitin chain adopts multiple conformational states for specific target recognition.
Elife, 4, 2015
1GJZ
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Solution structure of a dimeric N-terminal fragment of human ubiquitin
分子名称: UBIQUITIN
著者Bolton, D, Evans, P.A, Stott, K, Broadhurst, R.W.
登録日2001-08-06
公開日2001-12-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and Properties of a Dimeric N-Terminal Fragment of Human Ubiquitin.
J.Mol.Biol., 314, 2001
2MWS
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Structure of the complex of ubiquitin and the ubiquitin-like (UBL) domain of Ddi1
分子名称: DNA damage-inducible protein 1, Ubiquitin
著者Fushman, D, Nowicka, U, Walker, O.
登録日2014-11-23
公開日2015-03-25
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献DNA-Damage-Inducible 1 Protein (Ddi1) Contains an Uncharacteristic Ubiquitin-like Domain that Binds Ubiquitin.
Structure, 23, 2015
2K8C
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BU of 2k8c by Molmil
Solution structure of PLAA family ubiquitin binding domain (PFUC) trans isomer in complex with ubiquitin
分子名称: Phospholipase A-2-activating protein, Ubiquitin
著者Fu, Q.S, Zhou, C.J, Gao, H.C, Lin, D.H, Hu, H.Y.
登録日2008-09-04
公開日2009-05-05
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural Basis for Ubiquitin Recognition by a Novel Domain from Human Phospholipase A2-activating Protein.
J.Biol.Chem., 284, 2009
1C3T
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BU of 1c3t by Molmil
ROTAMER STRAIN AS A DETERMINANT OF PROTEIN STRUCTURAL SPECIFICITY
分子名称: PROTEIN (1D8 UBIQUITIN)
著者Lazar, G.A, Johnson, E.C, Desjarlais, J.R, Handel, T.M.
登録日1999-07-28
公開日1999-08-20
最終更新日2024-04-10
実験手法SOLUTION NMR
主引用文献Rotamer strain as a determinant of protein structural specificity.
Protein Sci., 8, 1999
2K6D
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BU of 2k6d by Molmil
CIN85 Sh3-C domain in complex with ubiquitin
分子名称: SH3 domain-containing kinase-binding protein 1, Ubiquitin
著者Forman-Kay, J, Bezsonova, I.
登録日2008-07-07
公開日2008-08-19
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Interactions between the three CIN85 SH3 domains and ubiquitin: implications for CIN85 ubiquitination.
Biochemistry, 47, 2008
1FXT
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BU of 1fxt by Molmil
STRUCTURE OF A CONJUGATING ENZYME-UBIQUITIN THIOLESTER COMPLEX
分子名称: UBIQUITIN, UBIQUITIN-CONJUGATING ENZYME E2-24 KDA
著者Hamilton, K.S, Shaw, G.S, Williams, R.S, Huzil, J.T, McKenna, S, Ptak, C, Glover, M, Ellison, M.J.
登録日2000-09-26
公開日2001-10-10
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of a conjugating enzyme-ubiquitin thiolester intermediate reveals a novel role for the ubiquitin tail.
Structure, 9, 2001
1YX6
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BU of 1yx6 by Molmil
Solution Structure of S5a UIM-2/Ubiquitin Complex
分子名称: 26S proteasome non-ATPase regulatory subunit 4, Ubiquitin
著者Wang, Q, Young, P, Walters, K.J.
登録日2005-02-19
公開日2005-04-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of S5a Bound to Monoubiquitin Provides a Model for Polyubiquitin Recognition
J.Mol.Biol., 348, 2005
2KJH
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NMR based structural model of the UBCH8-UBIQUITIN complex
分子名称: Ubiquitin, Ubiquitin/ISG15-conjugating enzyme E2 L6
著者Serniwka, S.A, Shaw, G.S.
登録日2009-05-28
公開日2009-12-08
最終更新日2021-10-13
実験手法SOLUTION NMR
主引用文献The structure of the UbcH8-ubiquitin complex shows a unique ubiquitin interaction site.
Biochemistry, 48, 2009
2KDF
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NMR structure of minor S5a (196-306):K48 linked diubiquitin species
分子名称: 26S proteasome non-ATPase regulatory subunit 4, Ubiquitin
著者Zhang, N, Wang, Q, Ehlinger, A, Randles, L, Lary, J.W, Kang, Y, Haririnia, A, Cole, J.L, Fushman, D, Walters, K.J.
登録日2009-01-06
公開日2009-09-01
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13.
Mol.Cell, 35, 2009
2K8B
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BU of 2k8b by Molmil
Solution structure of PLAA family ubiquitin binding domain (PFUC) cis isomer in complex with ubiquitin
分子名称: Phospholipase A-2-activating protein, Ubiquitin
著者Fu, Q.S, Zhou, C.J, Gao, H.C, Lin, D.H, Hu, H.Y.
登録日2008-09-04
公開日2009-05-05
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural Basis for Ubiquitin Recognition by a Novel Domain from Human Phospholipase A2-activating Protein.
J.Biol.Chem., 284, 2009
2RSU
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Alternative structure of Ubiquitin
分子名称: Ubiquitin
著者Kitazawa, S, Kameda, T, Yagi-Utsumi, M, Kato, K, Kitahara, R.
登録日2012-06-15
公開日2013-03-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution Structure of the Q41N Variant of Ubiquitin as a Model for the Alternatively Folded N2 State of Ubiquitin
Biochemistry, 52, 2013
1G6J
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STRUCTURE OF RECOMBINANT HUMAN UBIQUITIN IN AOT REVERSE MICELLES
分子名称: UBIQUITIN
著者Babu, C.R, Flynn, P.F, Wand, A.J.
登録日2000-11-06
公開日2001-03-28
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Validation of protein structure from preparations of encapsulated proteins dissolved in low viscosity fluids.
J.Am.Chem.Soc., 123, 2001
6N13
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BU of 6n13 by Molmil
UbcH7-Ub Complex with R0RBR Parkin and phosphoubiquitin
分子名称: E3 ubiquitin-protein ligase parkin, Ubiquitin-conjugating enzyme E2 L3, ZINC ION, ...
著者Condos, T.E.C, Dunkerley, K.M, Freeman, E.A, Barber, K.R, Aguirre, J.D, Chaugule, V.K, Xiao, Y, Konermann, L, Walden, H, Shaw, G.S.
登録日2018-11-08
公開日2018-11-28
最終更新日2020-01-08
実験手法SOLUTION NMR
主引用文献Synergistic recruitment of UbcH7~Ub and phosphorylated Ubl domain triggers parkin activation.
EMBO J., 37, 2018
2NR2
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BU of 2nr2 by Molmil
The MUMO (minimal under-restraining minimal over-restraining) method for the determination of native states ensembles of proteins
分子名称: Ubiquitin
著者Richter, B, Gsponer, J, Varnai, P, Salvatella, X, Vendruscolo, M.
登録日2006-11-01
公開日2007-05-08
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献The MUMO (minimal under-restraining minimal over-restraining) method for the determination of native state ensembles of proteins
J.Biomol.Nmr, 37, 2007
2BGF
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BU of 2bgf by Molmil
NMR structure of Lys48-linked di-ubiquitin using chemical shift perturbation data together with RDCs and 15N-relaxation data
分子名称: DI-UBIQUITIN
著者Van Dijk, A.D.J, Fushman, D, Bonvin, A.M.J.J.
登録日2004-12-22
公開日2005-08-31
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Various Strategies of Using Residual Dipolar Couplings in NMR-Driven Protein Docking: Application to Lys48-Linked Di-Ubiquitin and Validation Against 15N-Relaxation Data
Proteins: Struct., Funct., Bioinf., 60, 2005
2Z59
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BU of 2z59 by Molmil
Complex Structures of Mouse Rpn13 (22-130aa) and ubiquitin
分子名称: Protein ADRM1, Ubiquitin
著者Chen, X, Schreiner, P, Groll, M, Walters, K.J.
登録日2007-07-01
公開日2008-05-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Ubiquitin docking at the proteasome through a novel pleckstrin-homology domain interaction.
Nature, 453, 2008
1XQQ
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Simultaneous determination of protein structure and dynamics
分子名称: ubiquitin
著者Lindorff-Larsen, K, Best, R.B, DePristo, M.A, Vendruscolo, M, Dobson, C.M.
登録日2004-10-13
公開日2005-02-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Simultaneous determination of protein structure and dynamics
Nature, 433, 2005
2KX0
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the solution structure of UBB+1, frameshift mutant of ubiquitin B
分子名称: ubiquitin B
著者Ko, S.
登録日2010-04-22
公開日2010-09-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献the solution structure of UBB+1, frameshift mutant of ubiquitin B
To be Published
2KLG
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BU of 2klg by Molmil
PERE NMR structure of ubiquitin
分子名称: Ubiquitin
著者Madl, T, Bermel, W, Zangger, K.
登録日2009-07-02
公開日2009-10-06
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Use of Relaxation Enhancements in a Paramagnetic Environment for the Structure Determination of Proteins Using NMR Spectroscopy
Angew.Chem.Int.Ed.Engl., 48, 2009
2KN5
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A Correspondence Between Solution-State Dynamics of an Individual Protein and the Sequence and Conformational Diversity of its Family
分子名称: Ubiquitin
著者Friedland, G.D.
登録日2009-08-14
公開日2009-11-17
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A correspondence between solution-state dynamics of an individual protein and the sequence and conformational diversity of its family.
PLOS COMPUT.BIOL., 5, 2009
2PEA
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BU of 2pea by Molmil
NMR Based Structure of the Closed Conformation of LYS48-Linked Di-Ubiquitin Using Experimental Global Rotational Diffusion Tensor from NMR Relaxation Measurements
分子名称: Ubiquitin
著者Ryabov, Y, Fushman, D.
登録日2007-04-02
公開日2007-07-10
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural assembly of multidomain proteins and protein complexes guided by the overall rotational diffusion tensor.
J.Am.Chem.Soc., 129, 2007
1Q5W
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Ubiquitin Recognition by Npl4 Zinc-Fingers
分子名称: Ubiquitin, ZINC ION, homolog of yeast nuclear protein localization 4
著者Alam, S.L, Sun, J, Payne, M, Welch, B.D, Blake, B.K, Davis, D.R, Meyer, H.H, Emr, S.D, Sundquist, W.I.
登録日2003-08-11
公開日2004-03-30
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Ubiquitin interactions of NZF zinc fingers.
Embo J., 23, 2004
1ZGU
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Solution structure of the human Mms2-Ubiquitin complex
分子名称: Ubiquitin, Ubiquitin-conjugating enzyme E2 variant 2
著者Lewis, M.J, Saltibus, L.F, Hau, D.D, Xiao, W, Spyracopoulos, L.
登録日2005-04-22
公開日2006-04-04
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural Basis for Non-Covalent Interaction Between Ubiquitin and the Ubiquitin Conjugating Enzyme Variant Human MMS2.
J.Biomol.Nmr, 34, 2006

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