Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2MUX
DownloadVisualize
BU of 2mux by Molmil
SUMO2 non-covalently interacts with USP25 and downregulates its activity
Descriptor: Ubiquitin carboxyl-terminal hydrolase 25
Authors:Shi, L, Zhang, N, Wen, Y.
Deposit date:2014-09-18
Release date:2016-04-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:SUMO2 non-covalently interacts with USP25 and downregulates its activity
To be Published
6NNQ
DownloadVisualize
BU of 6nnq by Molmil
Non-covalent structure of SENP1 in complex with SUMO2
Descriptor: Sentrin-specific protease 1, Small ubiquitin-related modifier 3
Authors:Ambaye, N.D.
Deposit date:2019-01-15
Release date:2019-05-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.621 Å)
Cite:Noncovalent structure of SENP1 in complex with SUMO2.
Acta Crystallogr.,Sect.F, 75, 2019
3ZO5
DownloadVisualize
BU of 3zo5 by Molmil
Structure of SENP2-Loop1 in complex with preSUMO-2
Descriptor: SENTRIN-SPECIFIC PROTEASE 2, SMALL UBIQUITIN-RELATED MODIFIER 2
Authors:Alegre, K.O, Reverter, D.
Deposit date:2013-02-20
Release date:2014-01-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Insights Into the Senp6 Loop1 Structure in Complex with Sumo2.
Protein Sci., 23, 2014
7R2E
DownloadVisualize
BU of 7r2e by Molmil
Structure of human Senp7 with SUMO2
Descriptor: Sentrin-specific protease 7, Small ubiquitin-related modifier 3, prop-2-en-1-amine
Authors:Reverter, D, Li, Y.
Deposit date:2022-02-04
Release date:2022-12-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural Basis for the SUMO2 Isoform Specificity of SENP7.
J.Mol.Biol., 434, 2022
5TVP
DownloadVisualize
BU of 5tvp by Molmil
SUMO2 bound to Mouse Tdp2 catalytic domain with a 5'-phosphorylated DNA ternary complex
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3'), ...
Authors:Schellenberg, M.J, Williams, R.S.
Deposit date:2016-11-09
Release date:2017-10-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:ZATT (ZNF451)-mediated resolution of topoisomerase 2 DNA-protein cross-links.
Science, 357, 2017
3UIN
DownloadVisualize
BU of 3uin by Molmil
Complex between human RanGAP1-SUMO2, UBC9 and the IR1 domain from RanBP2
Descriptor: E3 SUMO-protein ligase RanBP2, Ran GTPase-activating protein 1, SUMO-conjugating enzyme UBC9, ...
Authors:Gareau, J.R, Reverter, D, Lima, C.D.
Deposit date:2011-11-05
Release date:2011-12-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.597 Å)
Cite:Determinants of small ubiquitin-like modifier 1 (SUMO1) protein specificity, E3 ligase, and SUMO-RanGAP1 binding activities of nucleoporin RanBP2.
J.Biol.Chem., 287, 2012
5TVQ
DownloadVisualize
BU of 5tvq by Molmil
Mouse Tdp2 catalytic domain bound to SUMO2
Descriptor: ACETATE ION, CALCIUM ION, Small ubiquitin-related modifier 2, ...
Authors:Schellenberg, M.J, Williams, R.S.
Deposit date:2016-11-09
Release date:2017-09-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:ZATT (ZNF451)-mediated resolution of topoisomerase 2 DNA-protein cross-links.
Science, 357, 2017
3UIO
DownloadVisualize
BU of 3uio by Molmil
Complex between human RanGAP1-SUMO2, UBC9 and the IR1 domain from RanBP2 containing IR2 Motif II
Descriptor: E3 SUMO-protein ligase RanBP2, Ran GTPase-activating protein 1, SUMO-conjugating enzyme UBC9, ...
Authors:Gareau, J.R, Reverter, D, Lima, C.D.
Deposit date:2011-11-05
Release date:2011-12-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:Determinants of small ubiquitin-like modifier 1 (SUMO1) protein specificity, E3 ligase, and SUMO-RanGAP1 binding activities of nucleoporin RanBP2.
J.Biol.Chem., 287, 2012
7ZJV
DownloadVisualize
BU of 7zjv by Molmil
Structure of human USPL1 in covalent complex with DeltaN-SUMO2/3-PA probe
Descriptor: CHLORIDE ION, SUMO-specific isopeptidase USPL1, Small ubiquitin-related modifier 2, ...
Authors:Zhao, Z, Gersch, M.
Deposit date:2022-04-12
Release date:2023-09-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Native Semisynthesis of Isopeptide-Linked Substrates for Specificity Analysis of Deubiquitinases and Ubl Proteases.
J.Am.Chem.Soc., 145, 2023
5D2M
DownloadVisualize
BU of 5d2m by Molmil
Complex between human SUMO2-RANGAP1, UBC9 and ZNF451
Descriptor: 1,2-ETHANEDIOL, Ran GTPase-activating protein 1, SUMO-conjugating enzyme UBC9, ...
Authors:Cappadocia, L, Lima, C.D.
Deposit date:2015-08-05
Release date:2015-11-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for catalytic activation by the human ZNF451 SUMO E3 ligase.
Nat.Struct.Mol.Biol., 22, 2015
8OI3
DownloadVisualize
BU of 8oi3 by Molmil
Structure of NopD with AtSUMO2
Descriptor: Small ubiquitin-related modifier 2, Type III effector, prop-2-en-1-amine
Authors:Reverter, D, Li, Y.
Deposit date:2023-03-22
Release date:2024-04-03
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Broad-spectrum ubiquitin/ubiquitin-like deconjugation activity of the rhizobial effector NopD from Bradyrhizobium (sp. XS1150).
Commun Biol, 7, 2024
6JXX
DownloadVisualize
BU of 6jxx by Molmil
SUMO2 bound to phosphorylated SLS4-SIM peptide from ICP0
Descriptor: Phosphorylated SLS4 from E3 ubiquitin ligase ICP0, Small ubiquitin-related modifier 2
Authors:Hembram, D.S.S, Negi, H, Shet, D, Das, R.
Deposit date:2019-04-25
Release date:2020-02-05
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:The Viral SUMO-Targeted Ubiquitin Ligase ICP0 is Phosphorylated and Activated by Host Kinase Chk2.
J.Mol.Biol., 432, 2020
2CKH
DownloadVisualize
BU of 2ckh by Molmil
SENP1-SUMO2 complex
Descriptor: SENTRIN-SPECIFIC PROTEASE 1, SMALL UBIQUITIN-RELATED MODIFIER 2
Authors:Shen, L.N, Dong, C, Liu, H, Hay, R.T, Naismith, J.H.
Deposit date:2006-04-18
Release date:2006-04-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The Structure of Senp1-Sumo-2 Complex Suggests a Structural Basis for Discrimination between Sumo Paralogues During Processing.
Biochem.J., 397, 2006
2N1W
DownloadVisualize
BU of 2n1w by Molmil
Solution structure of human SUMO2
Descriptor: Small ubiquitin-related modifier 2
Authors:Naik, M.T, Naik, N, Shih, H, Huang, T.
Deposit date:2015-04-24
Release date:2016-04-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structures of human SUMO
To Be Published
4NPN
DownloadVisualize
BU of 4npn by Molmil
Crystal structure of human tetra-SUMO-2
Descriptor: Small ubiquitin-related modifier 2
Authors:Kung, C.C.-H, Naik, M.T, Chen, C.L, Ma, C, Huang, T.H.
Deposit date:2013-11-22
Release date:2014-10-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.633 Å)
Cite:Structural analysis of poly-SUMO chain recognition by the RNF4-SIMs domain.
Biochem.J., 462, 2014
6JXW
DownloadVisualize
BU of 6jxw by Molmil
Complex of SUMO2 bound SLS4 from ICP0.
Descriptor: SLS4-SIM from Ubiquitin E3 ligase ICP0, Small ubiquitin-related modifier 2
Authors:Hembram, D.S.S, Negi, H, Shet, D, Das, R.
Deposit date:2019-04-25
Release date:2020-02-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Viral SUMO-Targeted Ubiquitin Ligase ICP0 is Phosphorylated and Activated by Host Kinase Chk2.
J.Mol.Biol., 432, 2020
5GHB
DownloadVisualize
BU of 5ghb by Molmil
SOLUTION STRUCTURE OF LYS42 ACETYLATED HUMAN SUMO2
Descriptor: Small ubiquitin-related modifier 2
Authors:Naik, M.T, Naik, N, Shih, H, Huang, T.
Deposit date:2016-06-19
Release date:2017-06-07
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Structures Of Human Sumo
To Be Published
7P99
DownloadVisualize
BU of 7p99 by Molmil
Structure of human USPL1 in complex with SUMO2
Descriptor: SUMO-specific isopeptidase USPL1, Small ubiquitin-related modifier, ZINC ION
Authors:Reverter, D, Ying, L.
Deposit date:2021-07-26
Release date:2022-03-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the SUMO protease activity of the atypical ubiquitin-specific protease USPL1.
Nat Commun, 13, 2022
5GHC
DownloadVisualize
BU of 5ghc by Molmil
SOLUTION STRUCTURE OF LYS33 ACETYLATED HUMAN SUMO2
Descriptor: Small ubiquitin-related modifier 2
Authors:Naik, M.T, Naik, N, Shih, H, Huang, T.
Deposit date:2016-06-19
Release date:2017-06-07
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:Structures Of Human Sumo
To Be Published
3UIP
DownloadVisualize
BU of 3uip by Molmil
Complex between human RanGAP1-SUMO1, UBC9 and the IR1 domain from RanBP2 containing IR2 Motif II
Descriptor: E3 SUMO-protein ligase RanBP2, Ran GTPase-activating protein 1, SUMO-conjugating enzyme UBC9, ...
Authors:Gareau, J.R, Reverter, D, Lima, C.D.
Deposit date:2011-11-05
Release date:2011-12-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.293 Å)
Cite:Determinants of small ubiquitin-like modifier 1 (SUMO1) protein specificity, E3 ligase, and SUMO-RanGAP1 binding activities of nucleoporin RanBP2.
J.Biol.Chem., 287, 2012
1WZ0
DownloadVisualize
BU of 1wz0 by Molmil
Solution Structure of Human SUMO-2 (SMT3B), a Ubiquitin-like Protein
Descriptor: Ubiquitin-like protein SMT3B
Authors:Zhao, C, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-02-21
Release date:2005-08-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of Human SUMO-2 (SMT3B), a Ubiquitin-like Protein
To be Published
6K5R
DownloadVisualize
BU of 6k5r by Molmil
Complex of SUMO2 with Phosphorylated viral SIM IE2
Descriptor: ASP-THR-ALA-GLY-CYS-ILE-VAL-ILE-SEP-ASP-SEP-GLU, Small ubiquitin-related modifier 3
Authors:Chatterjee, K.S, Das, R.
Deposit date:2019-05-30
Release date:2019-08-07
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:Casein kinase-2-mediated phosphorylation increases the SUMO-dependent activity of the cytomegalovirus transactivator IE2.
J.Biol.Chem., 294, 2019
2AWT
DownloadVisualize
BU of 2awt by Molmil
Solution Structure of Human Small Ubiquitin-Like Modifier Protein Isoform 2 (SUMO-2)
Descriptor: Small ubiquitin-related modifier 2
Authors:Chang, C.K, Wang, Y.H, Chung, T.L, Chang, C.F, Li, S.S.L, Huang, T.H.
Deposit date:2005-09-02
Release date:2006-10-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of Human Small Ubiquitin-Like Modifier Protein Isoform 2 (SUMO-2)
To be Published
2N9E
DownloadVisualize
BU of 2n9e by Molmil
Structure of SUMO-2 bound to phosphorylated RAP80 SIM
Descriptor: BRCA1-A complex subunit RAP80, Small ubiquitin-related modifier 2
Authors:Anamika, A, Spyracopoulos, L.
Deposit date:2015-11-15
Release date:2016-01-20
Last modified:2016-03-23
Method:SOLUTION NMR
Cite:Molecular Basis for Phosphorylation-dependent SUMO Recognition by the DNA Repair Protein RAP80.
J.Biol.Chem., 291, 2016
2RPQ
DownloadVisualize
BU of 2rpq by Molmil
Solution Structure of a SUMO-interacting motif of MBD1-containing chromatin-associated factor 1 bound to SUMO-3
Descriptor: Activating transcription factor 7-interacting protein 1, Small ubiquitin-related modifier 2
Authors:Sekiyama, N, Ikegami, T, Yamane, T, Ikeguchi, M, Uchimura, Y, Baba, D, Ariyoshi, M, Tochio, H, Saitoh, H, Shirakawa, M.
Deposit date:2008-07-07
Release date:2008-10-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the small ubiquitin-like modifier (SUMO)-interacting motif of MBD1-containing chromatin-associated factor 1 bound to SUMO-3
J.Biol.Chem., 283, 2008

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon