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7W05
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BU of 7w05 by Molmil
12 mutant Ribonuclease from Hericium erinaceus GMP binding form
Descriptor: DI(HYDROXYETHYL)ETHER, GUANOSINE, Ribonuclease T1
Authors:Takebe, K, Chida, T, Suzuki, M, Itagaki, T, Morita, Y, Uzawa, N, Kobayashi, H.
Deposit date:2021-11-17
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:12 mutant Ribonuclease from Hericium erinaceus GMP binding form
To Be Published
7MRX
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BU of 7mrx by Molmil
Cryogenic crystal structure of barnase A43C/S80C bound to barstar C40A/C82A
Descriptor: Barstar, Ribonuclease
Authors:Caro, J.A, Smith, J, Wand, A.J.
Deposit date:2021-05-10
Release date:2022-05-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Conformational entropy and protein affinity
To Be Published
6LS1
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BU of 6ls1 by Molmil
Ribonuclease from Hericium erinaceus active and GMP binding form
Descriptor: DI(HYDROXYETHYL)ETHER, GUANOSINE, Ribonuclease T1, ...
Authors:Takebe, K, Suzuki, M, Sangawa, T, Kobayashi, H, Itagaki, T.
Deposit date:2020-01-16
Release date:2021-01-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Ribonuclease from Hericium erinaceus active and GMP binding form
To Be Published
6PQK
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BU of 6pqk by Molmil
Cryogenic crystal structure of barnase A43C/S80C bound to barstar C40A/S59C/A67C/C82A
Descriptor: 1,2-ETHANEDIOL, Barstar, PHOSPHATE ION, ...
Authors:Caro, J.A, Djanto, V, Wand, A.J.
Deposit date:2019-07-09
Release date:2020-07-15
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Targeting conformational entropy to modulate binding affinity
To Be Published
5GY6
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BU of 5gy6 by Molmil
Ribonuclease from Hericium erinaceus (RNase He1)
Descriptor: Ribonuclease T1, ZINC ION
Authors:Kobayashi, H, Sangawa, T, Takebe, K, Itagaki, T, Motoyoshi, N, Suzuki, M.
Deposit date:2016-09-21
Release date:2017-09-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Ribonuclease from Hericium erinaceus (RNase He1)
To Be Published
3WR2
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BU of 3wr2 by Molmil
RNase Po1 complexed with 3'GMP
Descriptor: GUANOSINE-3'-MONOPHOSPHATE, Guanyl-specific ribonuclease Po1
Authors:Hara, Y, Katsutani, T, Kobayashi, H, Suzuki, M.
Deposit date:2014-02-13
Release date:2015-02-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:RNase Po1 complexed with 3'GMP
to be published
3WHO
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BU of 3who by Molmil
X-ray-Crystallographic Structure of an RNase Po1 Exhibiting Anti-tumor Activity
Descriptor: Guanyl-specific ribonuclease Po1
Authors:Kobayashi, H, Katsurtani, T, Hara, Y, Motoyoshi, N, Itagaki, T, Akita, F, Higashiura, A, Yamada, Y, Suzuki, M, Inokuchi, N.
Deposit date:2013-08-30
Release date:2014-07-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:X-ray crystallographic structure of RNase Po1 that exhibits anti-tumor activity.
Biol.Pharm.Bull., 37, 2014
4J5K
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BU of 4j5k by Molmil
Crystal structure analysis of Streptomyces aureofaciens ribonuclease Sa Y51F mutant
Descriptor: GLYCEROL, Guanyl-specific ribonuclease Sa, SULFATE ION
Authors:Urbanikova, L, Sevcik, J.
Deposit date:2013-02-08
Release date:2014-05-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Contribution of hydrogen bonds to protein stability.
Protein Sci., 23, 2014
4J5G
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BU of 4j5g by Molmil
Crystal structure analysis of Streptomyces aureofaciens ribonuclease Sa T95A mutant
Descriptor: CACODYLATE ION, GLYCEROL, Guanyl-specific ribonuclease Sa, ...
Authors:Urbanikova, L, Sevcik, J.
Deposit date:2013-02-08
Release date:2014-05-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Contribution of hydrogen bonds to protein stability.
Protein Sci., 23, 2014
4GHO
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BU of 4gho by Molmil
Crystal Structure Analysis of Streptomyces aureofaciens Ribonuclease S24A mutant
Descriptor: Guanyl-specific ribonuclease Sa, SULFATE ION
Authors:Sevcik, J, Urbanikova, L.
Deposit date:2012-08-08
Release date:2013-08-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Contribution of hydrogen bonds to protein stability
Protein Sci., 23, 2014
4HAA
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BU of 4haa by Molmil
Structure of Ribonuclease Binase Glu43Ala/Phe81Ala Mutant
Descriptor: Ribonuclease
Authors:Polyakov, K.M, Trofimov, A.A, Mitchevich, V.A, Dorovatovskii, P.V, Schulga, A.A, Makarov, A.A, Tkach, E.N, Goncharuk, D.A.
Deposit date:2012-09-26
Release date:2012-10-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and functional studies of the ribonuclease binase Glu43Ala/Phe81Ala mutant.
Acta Crystallogr.,Sect.D, 69, 2013
3URP
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BU of 3urp by Molmil
Re-refinement of PDB entry 5RNT - ribonuclease T1 with guanosine-3',5'-diphosphate and phosphate ion bound
Descriptor: GUANOSINE-3',5'-DIPHOSPHATE, Guanyl-specific ribonuclease T1, PHOSPHATE ION, ...
Authors:Smart, O.S, Womack, T.O, Flensburg, C, Keller, P, Sharff, A, Paciorek, W, Vonrhein, C, Bricogne, G.
Deposit date:2011-11-22
Release date:2012-03-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Exploiting structure similarity in refinement: automated NCS and target-structure restraints in BUSTER.
Acta Crystallogr.,Sect.D, 68, 2012
3SYU
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BU of 3syu by Molmil
Re-refined coordinates for pdb entry 1det - ribonuclease T1 carboxymethylated at GLU 58 in complex with 2'GMP
Descriptor: GUANOSINE-2'-MONOPHOSPHATE, Guanyl-specific ribonuclease T1, SODIUM ION, ...
Authors:Smart, O.S, Womack, T.O, Bricogne, G.
Deposit date:2011-07-18
Release date:2012-03-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Exploiting structure similarity in refinement: automated NCS and target-structure restraints in BUSTER.
Acta Crystallogr.,Sect.D, 68, 2012
3Q3F
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BU of 3q3f by Molmil
Engineering Domain-Swapped Binding Interfaces by Mutually Exclusive Folding: Insertion of Ubiquitin into position 103 of Barnase
Descriptor: Ribonuclease/Ubiquitin chimeric protein, SULFATE ION
Authors:Ha, J.-H, Karchin, J.M, Walker-Kopp, N, Huang, L.-S, Berry, E.A, Loh, S.N.
Deposit date:2010-12-21
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.169 Å)
Cite:Engineering domain-swapped binding interfaces by mutually exclusive folding.
J.Mol.Biol., 416, 2012
3A5E
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BU of 3a5e by Molmil
Crystal structure of 5K RNase Sa
Descriptor: Guanyl-specific ribonuclease Sa
Authors:Takano, K.
Deposit date:2009-08-06
Release date:2010-08-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Urea denatured state ensembles contain extensive secondary structure that is increased in hydrophobic proteins
Protein Sci., 19, 2010
3AGO
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BU of 3ago by Molmil
Crystal Structure of Ustilago sphaerogena Ribonuclease U2 complexed with adenosine 3'-monophosphate
Descriptor: CALCIUM ION, CHLORIDE ION, Ribonuclease U2, ...
Authors:Noguchi, S.
Deposit date:2010-04-03
Release date:2010-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Isomerization mechanism of aspartate to isoaspartate implied by structures of Ustilago sphaerogena ribonuclease U2 complexed with adenosine 3'-monophosphate
Acta Crystallogr.,Sect.D, 66, 2010
3AHS
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BU of 3ahs by Molmil
Crystal Structure of Ustilago sphaerogena Ribonuclease U2B
Descriptor: GLYCEROL, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Noguchi, S.
Deposit date:2010-04-29
Release date:2010-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structural changes induced by the deamidation and isomerization of asparagine revealed by the crystal structure of Ustilago sphaerogena ribonuclease U2B
Biopolymers, 93, 2010
3AHW
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BU of 3ahw by Molmil
Crystal Structure of Ustilago sphaerogena Ribonuclease U2 complexed with adenosine 2'-monophosphate
Descriptor: ADENOSINE-2'-MONOPHOSPHATE, CALCIUM ION, Ribonuclease U2
Authors:Noguchi, S.
Deposit date:2010-05-04
Release date:2010-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Conformational variation revealed by the crystal structure of RNase U2A complexed with Ca ion and 2'-adenylic acid at 1.03 angstrom resolution.
Protein Pept.Lett., 17, 2010
3AGN
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BU of 3agn by Molmil
Crystal Structure of Ustilago sphaerogena Ribonuclease U2 Complexed with adenosine 3'-monophosphate
Descriptor: CALCIUM ION, Ribonuclease U2, [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphate
Authors:Noguchi, S.
Deposit date:2010-04-03
Release date:2010-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:Isomerization mechanism of aspartate to isoaspartate implied by structures of Ustilago sphaerogena ribonuclease U2 complexed with adenosine 3'-monophosphate
Acta Crystallogr.,Sect.D, 66, 2010
3KCH
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BU of 3kch by Molmil
Baranase crosslinked by glutaraldehyde
Descriptor: PENTANEDIAL, Ribonuclease
Authors:Prange, T, Salem, M, Mauguen, Y.
Deposit date:2009-10-21
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Revisiting glutaraldehyde cross-linking: the case of the Arg-Lys intermolecular doublet
Acta Crystallogr.,Sect.F, 66, 2010
2KF6
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BU of 2kf6 by Molmil
Barnase bound to d(CGAC) high pressure
Descriptor: Ribonuclease
Authors:Williamson, M.P, Wilton, D.J.
Deposit date:2009-02-11
Release date:2009-12-08
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Pressure-dependent structure changes in barnase on ligand binding reveal intermediate rate fluctuations.
Biophys.J., 97, 2009
2KF4
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BU of 2kf4 by Molmil
Barnase high pressure structure
Descriptor: Ribonuclease
Authors:Williamson, M.P, Wilton, D.J.
Deposit date:2009-02-11
Release date:2009-12-08
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Pressure-dependent structure changes in barnase on ligand binding reveal intermediate rate fluctuations.
Biophys.J., 97, 2009
2KF3
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BU of 2kf3 by Molmil
Barnase, low pressure reference NMR structure
Descriptor: Ribonuclease
Authors:Williamson, M.P, Wilton, D.J.
Deposit date:2009-02-11
Release date:2009-12-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Pressure-dependent structure changes in barnase on ligand binding reveal intermediate rate fluctuations.
Biophys.J., 97, 2009
2KF5
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BU of 2kf5 by Molmil
Barnase bound to d(CGAC), low pressure
Descriptor: Ribonuclease
Authors:Williamson, M.P, Wilton, D.J.
Deposit date:2009-02-11
Release date:2009-12-08
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Pressure-dependent structure changes in barnase on ligand binding reveal intermediate rate fluctuations.
Biophys.J., 97, 2009
2KAA
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BU of 2kaa by Molmil
Solution Structure of Hirsutellin A from Hirsutella thompsonii
Descriptor: Hirsutellin A
Authors:Viegas, A, Macedo, A.L, Bruix, M.
Deposit date:2008-11-04
Release date:2009-11-03
Last modified:2019-10-09
Method:SOLUTION NMR
Cite:Solution structure of hirsutellin A--new insights into the active site and interacting interfaces of ribotoxins.
Febs J., 276, 2009

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