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4WLH
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High resolution crystal structure of human kynurenine aminotransferase-I bound to PLP cofactor
Descriptor: Kynurenine--oxoglutarate transaminase 1
Authors:Nadvi, N.A, Salam, N.K, Park, J, Akladios, F.N, Kapoor, V, Collyer, C.A, Gorrell, M.D, Church, W.B.
Deposit date:2014-10-07
Release date:2014-12-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:High resolution crystal structures of human kynurenine aminotransferase-I bound to PLP cofactor, and in complex with aminooxyacetate.
Protein Sci., 26, 2017
6JPK
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Crystal structure of S. pombe aspartate aminotransferase
Descriptor: Aspartate aminotransferase, cytoplasmic, GLYCEROL, ...
Authors:Jin, H, Chang, J.H.
Deposit date:2019-03-27
Release date:2019-09-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Crystal structure of L-aspartate aminotransferase from Schizosaccharomyces pombe.
Plos One, 14, 2019
1SPA
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ROLE OF ASP222 IN THE CATALYTIC MECHANISM OF ESCHERICHIA COLI ASPARTATE AMINOTRANSFERASE: THE AMINO ACID RESIDUE WHICH ENHANCES THE FUNCTION OF THE ENZYME-BOUND COENZYME PYRIDOXAL 5'-PHOSPHATE
Descriptor: ASPARTATE AMINOTRANSFERASE, N-METHYL-4-DEOXY-4-AMINO-PYRIDOXAL-5-PHOSPHATE
Authors:Hinoue, Y, Yano, T, Metzler, D.E, Miyahara, I, Hirotsu, K, Kagamiyama, H.
Deposit date:1993-01-26
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Role of Asp222 in the catalytic mechanism of Escherichia coli aspartate aminotransferase: the amino acid residue which enhances the function of the enzyme-bound coenzyme pyridoxal 5'-phosphate.
Biochemistry, 31, 1992
3DC1
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BU of 3dc1 by Molmil
Crystal structure of kynurenine aminotransferase II complex with alpha-ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, GLYCEROL, Kynurenine/alpha-aminoadipate aminotransferase mitochondrial
Authors:Han, Q, Cai, T, Tagle, D.A, Robinson, H, Li, J.
Deposit date:2008-06-03
Release date:2008-07-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Substrate specificity and structure of human aminoadipate aminotransferase/kynurenine aminotransferase II
Biosci.Rep., 28, 2008
7SZP
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Crystal Structure of Histidinol-phosphate aminotransferase from Klebsiella pneumoniae subsp. pneumoniae (strain HS11286)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2021-11-29
Release date:2021-12-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Histidinol-phosphate aminotransferase from Klebsiella pneumoniae subsp. pneumoniae (strain HS11286)
to be published
2VGZ
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CRYSTAL STRUCTURE OF HUMAN KYNURENINE AMINOTRANSFERASE II
Descriptor: IODIDE ION, KYNURENINE/ALPHA-AMINOADIPATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Rossi, F, Garavaglia, S, Montalbano, V, Walsh, M.A, Rizzi, M.
Deposit date:2007-11-16
Release date:2007-12-04
Last modified:2015-12-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Human Kynurenine Aminotransferase II, a Drug Target for the Treatment of Schizophrenia.
J.Biol.Chem., 283, 2008
8GUH
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Serine Palmitoyltransferase from Sphingobacterium multivorum complexed with Tris
Descriptor: 1,2-ETHANEDIOL, Serine palmitoyltransferase, [4-[[[2-(hydroxymethyl)-1,3-bis(oxidanyl)propan-2-yl]amino]methyl]-6-methyl-5-oxidanyl-pyridin-3-yl]methyl dihydrogen phosphate
Authors:Murakami, T, Takahashi, A, Katayama, A, Miyahara, I, Kamiya, N, Ikushiro, H, Yano, T.
Deposit date:2022-09-12
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of Sphingobacterium multivorum serine palmitoyltransferase complexed with tris(hydroxymethyl)aminomethane.
Acta Crystallogr.,Sect.F, 78, 2022
6ONN
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Crystal structure of 8-amino-7-oxononanoate synthase from Burkholderia phymatum
Descriptor: 8-amino-7-oxononanoate synthase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-04-22
Release date:2019-05-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of 8-amino-7-oxononanoate synthase from Burkholderia phymatum
To be published
5JAY
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Crystal Structure of an 8-amino-7-oxononanoate Synthase from Burkholderia xenovorans
Descriptor: 8-amino-7-oxononanoate synthase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2016-04-12
Release date:2016-04-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of an 8-amino-7-oxononanoate Synthase from Burkholderia xenovorans
to be published
7N79
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O2-, PLP-dependent desaturase Plu4 holo-enzyme
Descriptor: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, ...
Authors:Hoffarth, E.R, Ryan, K.S.
Deposit date:2021-06-09
Release date:2021-10-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:A shared mechanistic pathway for pyridoxal phosphate-dependent arginine oxidases.
Proc.Natl.Acad.Sci.USA, 118, 2021
2BWP
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5-Aminolevulinate Synthase from Rhodobacter capsulatus in complex with glycine
Descriptor: 5-AMINOLEVULINATE SYNTHASE, ACETIC ACID, N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE]
Authors:Astner, I, Schulze, J.O, Van Den Heuvel, J.J, Jahn, D, Schubert, W.-D, Heinz, D.W.
Deposit date:2005-07-15
Release date:2005-09-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of 5-Aminolevulinate Synthase, the First Enzyme of Heme Biosynthesis, and its Link to Xlsa in Humans.
Embo J., 24, 2005
6QP3
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Crystal structure of the PLP-bound C-S lyase from Bacillus subtilis (strain 168)
Descriptor: ACETATE ION, Cystathionine beta-lyase PatB, PYRIDOXAL-5'-PHOSPHATE
Authors:Herman, R, Rudden, M, Wilkinson, A.J, Hanai, S, Thomas, G.H.
Deposit date:2019-02-13
Release date:2020-03-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The molecular basis of thioalcohol production in human body odour.
Sci Rep, 10, 2020
2JGT
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Low resolution structure of SPT
Descriptor: SERINE PALMITOYLTRANSFERASE
Authors:Yard, B.A, Carter, L.G, Johnson, K.A, Overton, I.M, Mcmahon, S.A, Dorward, M, Liu, H, Puech, D, Oke, M, Barton, G.J, Naismith, J.H, Campopiano, D.J.
Deposit date:2007-02-14
Release date:2007-05-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Structure of Serine Palmitoyltransferase; Gateway to Sphingolipid Biosynthesis.
J.Mol.Biol., 370, 2007
2BWN
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BU of 2bwn by Molmil
5-Aminolevulinate Synthase from Rhodobacter capsulatus
Descriptor: 5-AMINOLEVULINATE SYNTHASE, ACETIC ACID, CHLORIDE ION, ...
Authors:Astner, I, Schulze, J.O, van den Heuvel, J.J, Jahn, D, Schubert, W.-D, Heinz, D.W.
Deposit date:2005-07-15
Release date:2005-09-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of 5-Aminolevulinate Synthase, the First Enzyme of Heme Biosynthesis, and its Link to Xlsa in Humans.
Embo J., 24, 2005
4WB0
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BU of 4wb0 by Molmil
Crystal structure of the broad specificity aminotransferase from Leishmania mexicana
Descriptor: Broad specificity aminotransferase, CACODYLATE ION
Authors:Wen, J, Nowicki, C, Blankenfeldt, W.
Deposit date:2014-09-02
Release date:2015-09-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural basis for the relaxed substrate selectivity of Leishmania mexicana broad specificity aminotransferase.
Mol.Biochem.Parasitol., 202, 2015
4W5K
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Structure of a mitochondrial aspartate aminotransferase from Trypanosoma brucei, K237A mutant
Descriptor: 1,2-ETHANEDIOL, Aspartate aminotransferase, mitochondrial, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-08-18
Release date:2014-09-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of aspartate aminotransferases from Trypanosoma brucei, Leishmania major and Giardia lamblia.
Acta Crystallogr.,Sect.F, 71, 2015
6S8W
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BU of 6s8w by Molmil
Aromatic aminotransferase AroH (Aro8) form Aspergillus fumigatus in complex with PLP (internal aldimine)
Descriptor: Aromatic aminotransferase Aro8, putative, FORMIC ACID, ...
Authors:Giardina, G, Mirco, D, Spizzichino, S, Zelante, T, Cutruzzola, F, Romani, L, Cellini, B.
Deposit date:2019-07-10
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of Aspergillus fumigatus AroH, an aromatic amino acid aminotransferase
Proteins, 2021
8QOF
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Cryo-EM structure of the yeast SPT-Orm2-Dimer complex
Descriptor: 2-{[(4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25R)-spirost-5-en-3-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranoside, ORM2 isoform 1, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Schaefer, J, Koerner, C, Moeller, A, Froehlich, F.
Deposit date:2023-09-28
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The structure of the Orm2-containing serine palmitoyltransferase complex reveals distinct inhibitory potentials of yeast Orm proteins.
Cell Rep, 43, 2024
8QOG
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Cryo-EM structure of the yeast SPT-Orm2-Monomer complex
Descriptor: 2-{[(4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25R)-spirost-5-en-3-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranoside, ORM2 isoform 1, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Schaefer, J, Koerner, C, Moeller, A, Froehlich, F.
Deposit date:2023-09-28
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The structure of the Orm2-containing serine palmitoyltransferase complex reveals distinct inhibitory potentials of yeast Orm proteins.
Cell Rep, 43, 2024
2JG2
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BU of 2jg2 by Molmil
HIGH RESOLUTION STRUCTURE OF SPT WITH PLP INTERNAL ALDIMINE
Descriptor: MAGNESIUM ION, PYRIDOXAL-5'-PHOSPHATE, SERINE PALMITOYLTRANSFERASE
Authors:Yard, B.A, Carter, L.G, Johnson, K.A, Overton, I.M, Mcmahon, S.A, Dorward, M, Liu, H, Puech, D, Oke, M, Barton, G.J, Naismith, J.H, Campopiano, D.J.
Deposit date:2007-02-07
Release date:2007-05-01
Last modified:2015-11-11
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The Structure of Serine Palmitoyltransferase; Gateway to Sphingolipid Biosynthesis.
J.Mol.Biol., 370, 2007
1C7N
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CRYSTAL STRUCTURE OF CYSTALYSIN FROM TREPONEMA DENTICOLA CONTAINS A PYRIDOXAL 5'-PHOSPHATE COFACTOR
Descriptor: CYSTALYSIN, PYRIDOXAL-5'-PHOSPHATE
Authors:Krupka, H.I, Huber, R, Holt, S.C, Clausen, T.
Deposit date:2000-03-16
Release date:2000-07-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of cystalysin from Treponema denticola: a pyridoxal 5'-phosphate-dependent protein acting as a haemolytic enzyme.
EMBO J., 19, 2000
1IVR
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BU of 1ivr by Molmil
STRUCTURE OF ASPARTATE AMINOTRANSFERASE
Descriptor: ASPARTATE AMINOTRANSFERASE, N-PYRIDOXYL-2,3-DIHYDROXYASPARTIC ACID-5-MONOPHOSPHATE
Authors:Graf Von Stosch, A.
Deposit date:1996-10-11
Release date:1997-07-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Aspartate aminotransferase complexed with erythro-beta-hydroxyaspartate: crystallographic and spectroscopic identification of the carbinolamine intermediate.
Biochemistry, 35, 1996
1C9C
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ASPARTATE AMINOTRANSFERASE COMPLEXED WITH C3-PYRIDOXAL-5'-PHOSPHATE
Descriptor: ALANYL-PYRIDOXAL-5'-PHOSPHATE, ASPARTATE AMINOTRANSFERASE
Authors:Ishijima, J, Nakai, T, Kawaguchi, S, Hirotsu, K, Kuramitsu, S.
Deposit date:1999-08-02
Release date:2000-12-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Free energy requirement for domain movement of an enzyme
J.Biol.Chem., 275, 2000
1C7O
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CRYSTAL STRUCTURE OF CYSTALYSIN FROM TREPONEMA DENTICOLA CONTAINS A PYRIDOXAL 5'-PHOSPHATE-L-AMINOETHOXYVINYLGLYCINE COMPLEX
Descriptor: (2E,3E)-4-(2-aminoethoxy)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)imino]but-3-enoic acid, CYSTALYSIN
Authors:Krupka, H.I, Huber, R, Holt, S.C, Clausen, T.
Deposit date:2000-03-16
Release date:2000-07-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of cystalysin from Treponema denticola: a pyridoxal 5'-phosphate-dependent protein acting as a haemolytic enzyme.
EMBO J., 19, 2000
4WBT
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Crystal structure of histidinol-phosphate aminotransferase from Sinorhizobium meliloti in complex with pyridoxal-5'-phosphate
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Shabalin, I.G, Bacal, P, Kowalska, A.K, Cooper, D.R, Stead, M, Hammonds, J, Ahmed, M, Hillerich, B.S, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-09-03
Release date:2014-09-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of histidinol-phosphate aminotransferase from Sinorhizobium meliloti in complex with pyridoxal-5'-phosphate
to be published

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