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3PK2
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Artificial Transfer Hydrogenases for the Enantioselective Reduction of Cyclic Imines
Descriptor: IRIDIUM (III) ION, Streptavidin, {N-(4-{[2-(amino-kappaN)ethyl]sulfamoyl-kappaN}phenyl)-5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide}(chloro)[(1,2,3,4,5-eta)-1,2,3,4,5-pentamethylcyclopentadienyl]iridium(III)
Authors:Schirmer, T, Heinisch, T.
Deposit date:2010-11-11
Release date:2011-04-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Artificial transfer hydrogenases for the enantioselective reduction of cyclic imines.
Angew.Chem.Int.Ed.Engl., 50, 2011
3MM0
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BU of 3mm0 by Molmil
Crystal structure of chimeric avidin
Descriptor: Avidin, Avidin-related protein 4/5
Authors:Livnah, O, Eisenberg-Domovich, Y, Maatta, J.A.E, Kulomaa, M.S, Hytonen, V.P, Nordlund, H.R.
Deposit date:2010-04-19
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Chimeric avidin shows stability against harsh chemical conditions-biochemical analysis and 3D structure.
Biotechnol.Bioeng., 108, 2011
3MG5
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BU of 3mg5 by Molmil
Core-streptavidin mutant F130L in complex with biotin
Descriptor: BIOTIN, GLYCEROL, Streptavidin
Authors:Le Trong, I, Baugh, L, Stayton, P.S, Lybrand, T.P, Stenkamp, R.E.
Deposit date:2010-04-05
Release date:2010-05-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:A distal point mutation in the streptavidin-biotin complex preserves structure but diminishes binding affinity: experimental evidence of electronic polarization effects?
Biochemistry, 49, 2010
2WPU
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BU of 2wpu by Molmil
Chaperoned ruthenium metallodrugs that recognize telomeric DNA
Descriptor: (3AS,4S,6AR)-4-(5-((3R,4R)-3,4-DIAMINOPYRROLIDIN-1-YL)-5-OXOPENTYL)TETRAHYDRO-1H-THIENO[3,4-D]IMIDAZOL-2(3H)-ONE-P-CYMENE-CHLORO-RUTHENIUM(III), GLYCEROL, STREPTAVIDIN, ...
Authors:Heinisch, T, Schirmer, T, Zimbron, J.M, Sardo, A, Wohlschlager, T, Gradinaru, J, Creus, M, Ward, T.R.
Deposit date:2009-08-10
Release date:2010-10-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Chemo-Genetic Optimization of DNA Recognition by Metallodrugs Using a Presenter-Protein Strategy.
Chemistry, 16, 2010
3FDC
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BU of 3fdc by Molmil
Crystal Structure of Avidin
Descriptor: Avidin, iron(II) tetracyano-5-(2-Oxo-hexahydro-thieno[3,4-d]imidazol-6-yl)-pentanoic acid (4'-methyl-[2,2']bipyridinyl-4-ylmethyl)-amide
Authors:Barker, K.D, Sazinsky, M.H, Eckermann, A.L, Abajian, C, Hartings, M.R, Rosenzweig, A.C, Meade, T.J.
Deposit date:2008-11-25
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Protein Binding and the Electronic Properties of Iron(II) Complexes: An Electrochemical and Optical Investigation of Outer Sphere Effects.
Bioconjug.Chem., 20, 2009
3EW2
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Crystal structure of rhizavidin-biotin complex
Descriptor: BIOTIN, rhizavidin
Authors:Livnah, O, Meir, A.
Deposit date:2008-10-14
Release date:2008-12-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of rhizavidin: insights into the enigmatic high-affinity interaction of an innate biotin-binding protein dimer.
J.Mol.Biol., 386, 2009
3EW1
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Crystal structure of rhizavidin
Descriptor: rhizavidin
Authors:Livnah, O, Meir, A.
Deposit date:2008-10-14
Release date:2008-12-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of rhizavidin: insights into the enigmatic high-affinity interaction of an innate biotin-binding protein dimer.
J.Mol.Biol., 386, 2009
2ZSC
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BU of 2zsc by Molmil
Tamavidin2, Novel Avidin-like Biotin-Binding Proteins from an Edible Mushroom
Descriptor: BIOTIN, GLYCEROL, MAGNESIUM ION, ...
Authors:Kakuta, Y, Okino, N, Ito, M, Yamamoto, T, Takakura, Y.
Deposit date:2008-09-05
Release date:2009-02-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Tamavidins--novel avidin-like biotin-binding proteins from the Tamogitake mushroom
Febs J., 276, 2009
2QCB
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T7-tagged full-length streptavidin complexed with ruthenium ligand
Descriptor: N-(4-{[(2-AMINOETHYL)AMINO]SULFONYL}PHENYL)-5-[(3AS,4S,6AR)-2-OXOHEXAHYDRO-1H-THIENO[3,4-D]IMIDAZOL-4-YL]PENTANAMIDE-(1,2,3,4,5,6-ETA)-BENZENE-CHLORO-RUTHENIUM(III), Streptavidin
Authors:Le Trong, I, Creus, M, Pordea, A, Ward, T.R, Stenkamp, R.E.
Deposit date:2007-06-19
Release date:2008-04-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:X-ray structure and designed evolution of an artificial transfer hydrogenase
Angew.Chem.Int.Ed.Engl., 47, 2008
2UZ2
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BU of 2uz2 by Molmil
Crystal structure of Xenavidin
Descriptor: ACETATE ION, BIOTIN, XENAVIDIN
Authors:Helppolainen, S.H, Maatta, J.A.E, Airenne, T.T, Johnson, M.S, Kulomaa, M.S, Nordlund, H.R.
Deposit date:2007-04-24
Release date:2008-06-03
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Functional Characteristics of Xenavidin, the First Frog Avidin from Xenopus Tropicalis.
Bmc Struct.Biol., 9, 2009
2UYW
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Crystal structure of Xenavidin
Descriptor: BIOTIN, FORMIC ACID, XENAVIDIN
Authors:Helppolainen, S.H, Maatta, J.A.E, Airenne, T.T, Johnson, M.S, Kulomaa, M.S, Nordlund, H.R.
Deposit date:2007-04-20
Release date:2008-05-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Functional Characteristics of Xenavidin, the First Frog Avidin from Xenopus Tropicalis.
Bmc Struct.Biol., 9, 2009
2JGS
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BU of 2jgs by Molmil
Circular permutant of avidin
Descriptor: BIOTIN, CIRCULAR PERMUTANT OF AVIDIN
Authors:Maatta, J.A.E, Hytonen, V.P, Airenne, T.T, Niskanen, E, Johnson, M.S, Kulomaa, M.S, Nordlund, H.R.
Deposit date:2007-02-14
Release date:2008-03-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Rational Modification of Ligand-Binding Preference of Avidin by Circular Permutation and Mutagenesis.
Chembiochem, 9, 2008
2OFB
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BU of 2ofb by Molmil
Crystal structure of AVR4 (R112L/C122S)-BNA complex
Descriptor: 5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC ACID (4-NITRO-PHENYL)-AMIDE, Avidin-related protein 4/5, FORMIC ACID
Authors:Livnah, O, Hayouka, R, Eisenberg-Domovich, Y.
Deposit date:2007-01-03
Release date:2007-12-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Critical importance of loop conformation to avidin-enhanced hydrolysis of an active biotin ester.
Acta Crystallogr.,Sect.D, 64, 2008
2OF9
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Crystal structure of apo AVR4 (D39A/C122S)
Descriptor: Avidin-related protein 4/5, FORMIC ACID
Authors:Livnah, O, Hayouka, R, Eisenberg-Domovich, Y.
Deposit date:2007-01-03
Release date:2007-12-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Critical importance of loop conformation to avidin-enhanced hydrolysis of an active biotin ester.
Acta Crystallogr.,Sect.D, 64, 2008
2OFA
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BU of 2ofa by Molmil
Crystal structure of apo AVR4 (R112L,C122S)
Descriptor: Avidin-related protein 4/5, FORMIC ACID
Authors:Livnah, O, Hayouka, R, Eisenberg-Domovich, Y.
Deposit date:2007-01-03
Release date:2007-12-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Critical importance of loop conformation to avidin-enhanced hydrolysis of an active biotin ester.
Acta Crystallogr.,Sect.D, 64, 2008
2OF8
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BU of 2of8 by Molmil
Crystal structure of AVR4 (D39A/C122S)-BNA complex
Descriptor: 5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC ACID (4-NITRO-PHENYL)-AMIDE, Avidin-related protein 4/5, FORMIC ACID
Authors:Livnah, O, Hayouka, R, Eisenberg-Domovich, Y.
Deposit date:2007-01-03
Release date:2007-12-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Critical importance of loop conformation to avidin-enhanced hydrolysis of an active biotin ester.
Acta Crystallogr.,Sect.D, 64, 2008
2GH7
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BU of 2gh7 by Molmil
Epi-biotin complex with core streptavidin
Descriptor: BIOTIN, EPI-BIOTIN, GLYCEROL, ...
Authors:Le Trong, I, Aubert, D.G.L, Thomas, N.R, Stenkamp, R.E.
Deposit date:2006-03-26
Release date:2006-04-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1 Å)
Cite:The high-resolution structure of (+)-epi-biotin bound to streptavidin.
Acta Crystallogr.,Sect.D, 62, 2006
2G5L
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BU of 2g5l by Molmil
Streptavidin in complex with Nanotag
Descriptor: (FME)(ASP)(VAL)(GLU)(ALA)(TRP)(LEU), GLYCEROL, SULFATE ION, ...
Authors:Perbandt, M, Bruns, O, Vallazza, M, Lamla, T, Betzel, C, Erdmann, V.A.
Deposit date:2006-02-23
Release date:2007-02-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:High resolution structure of Streptavidin in complex with a novel high affinity peptide tag mimicking the biotin binding motif
To be Published
2FHN
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Avidin related protein AVR4 (C122S, K109I mutant) in complex with BNA
Descriptor: 5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC ACID (4-NITRO-PHENYL)-AMIDE, Avidin-related protein 4/5, FORMIC ACID
Authors:Livnah, O, Prizant, M.
Deposit date:2005-12-26
Release date:2006-03-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Factors dictating the pseudocatalytic efficiency of avidins
J.Mol.Biol., 358, 2006
2FHL
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BU of 2fhl by Molmil
avidin related protein (AVR4)-BNA complex
Descriptor: 5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC ACID (4-NITRO-PHENYL)-AMIDE, Avidin-related protein 4/5, FORMIC ACID
Authors:Livnah, O, Prizant, M.
Deposit date:2005-12-26
Release date:2006-03-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Factors dictating the pseudocatalytic efficiency of avidins
J.Mol.Biol., 358, 2006
2F01
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BU of 2f01 by Molmil
Epi-biotin complex with core streptavidin
Descriptor: BIOTIN, EPI-BIOTIN, GLYCEROL, ...
Authors:Le Trong, I, Aubert, D.G, Thomas, N.R, Stenkamp, R.E.
Deposit date:2005-11-10
Release date:2005-11-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:The high-resolution structure of (+)-epi-biotin bound to streptavidin.
Acta Crystallogr.,Sect.D, 62, 2006
2C4I
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BU of 2c4i by Molmil
Crystal structure of engineered avidin
Descriptor: AVIDIN, BIOTIN, SULFATE ION
Authors:Hytonen, V.P, Horha, J, Airenne, T.T, Niskanen, E.A, Helttunen, K, Johnson, M.S, Salminen, T.A, Kulomaa, M.S, Nordlund, H.R.
Deposit date:2005-10-19
Release date:2006-07-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Controlling Quaternary Structure Assembly: Subunit Interface Engineering and Crystal Structure of Dual Chain Avidin.
J.Mol.Biol., 359, 2006
2BC3
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BU of 2bc3 by Molmil
T7-tagged full-length streptavidin
Descriptor: GLYCEROL, SULFATE ION, Streptavidin
Authors:Stenkamp, R.E, Le Trong, I, Ward, T.R, Humbert, N.
Deposit date:2005-10-18
Release date:2005-10-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Crystallographic Analysis of a Full-length Streptavidin with Its C-terminal Polypeptide Bound in the Biotin Binding Site.
J.Mol.Biol., 356, 2006
2A8G
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Structure of Avidin in complex with the ligand deoxyguanosine
Descriptor: 2'-DEOXY-GUANOSINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin
Authors:Conners, R, Hooley, E, Thomas, S, Brady, R.L.
Deposit date:2005-07-08
Release date:2006-05-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Recognition of oxidatively modified bases within the biotin-binding site of avidin.
J.Mol.Biol., 357, 2006
2A5B
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Avidin complexed with 8-oxodeoxyguanosine
Descriptor: 2'-DEOXY-8-OXOGUANOSINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin
Authors:Conners, R, Hooley, E, Thomas, S, Brady, R.L.
Deposit date:2005-06-30
Release date:2006-05-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Recognition of oxidatively modified bases within the biotin-binding site of avidin.
J.Mol.Biol., 357, 2006

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