Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4ABE
DownloadVisualize
BU of 4abe by Molmil
Fragments bound to bovine trypsin for the SAMPL challenge
Descriptor: (3-PYRAZOL-1-YLPHENYL)METHANAMINE, 1,2-ETHANEDIOL, CALCIUM ION, ...
Authors:Newman, J, Peat, T.S.
Deposit date:2011-12-08
Release date:2012-02-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The Dingo Dataset: A Comprehensive Set of Data for the Sampl Challenge.
J.Comput.Aided Mol.Des., 26, 2012
4J6A
DownloadVisualize
BU of 4j6a by Molmil
Crystal structure of Ribonuclease A soaked in 40% 2,2,2-Trifluoroethanol: One of twelve in MSCS set
Descriptor: Ribonuclease pancreatic, SULFATE ION, TRIFLUOROETHANOL
Authors:Kearney, B.M, Dechene, M, Swartz, P.D, Mattos, C.
Deposit date:2013-02-11
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:DRoP: A program for analysis of water structure on protein surfaces
to be published
3EUL
DownloadVisualize
BU of 3eul by Molmil
Structure of the signal receiver domain of the putative response regulator NarL from Mycobacterium tuberculosis
Descriptor: CHLORIDE ION, POSSIBLE NITRATE/NITRITE RESPONSE TRANSCRIPTIONAL REGULATORY PROTEIN NARL (DNA-binding response regulator, LuxR family)
Authors:Schneider, G, Schnell, R, Agren, D.
Deposit date:2008-10-10
Release date:2008-11-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:1.9 A structure of the signal receiver domain of the putative response regulator NarL from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.F, 64, 2008
4J6J
DownloadVisualize
BU of 4j6j by Molmil
Crystal structure of calcium2+-free wild-type CD23 lectin domain (crystal form A)
Descriptor: Low affinity immunoglobulin epsilon Fc receptor, SULFATE ION
Authors:Dhaliwal, B, Yahya, N, Sutton, B.J.
Deposit date:2013-02-11
Release date:2013-08-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conformational plasticity at the IgE-binding site of the B-cell receptor CD23.
Mol.Immunol., 56, 2013
3EV1
DownloadVisualize
BU of 3ev1 by Molmil
Crystal Structure of Ribonuclease A in 70% Hexanediol
Descriptor: HEXANE-1,6-DIOL, Ribonuclease pancreatic
Authors:Dechene, M, Wink, G, Smith, M, Swartz, P, Mattos, C.
Deposit date:2008-10-12
Release date:2009-06-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Multiple solvent crystal structures of ribonuclease A: An assessment of the method
Proteins, 76, 2009
3NLS
DownloadVisualize
BU of 3nls by Molmil
Crystal Structure of HIV-1 Protease in Complex with KNI-10772
Descriptor: (4R)-3-[(2R,3S)-3-{[(2,6-dimethylphenoxy)acetyl]amino}-2-hydroxy-4-phenylbutanoyl]-N-[(1S,2R)-2-hydroxy-2,3-dihydro-1H- inden-1-yl]-5,5-dimethyl-1,3-thiazolidine-4-carboxamide, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Gabelli, S.B, Kawasaki, Y, Freire, E, Amzel, L.M.
Deposit date:2010-06-21
Release date:2011-09-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of HIV-1 Protease in Complex with KNI-10772
To be Published
4JP1
DownloadVisualize
BU of 4jp1 by Molmil
Mg2+ bound structure of Vibrio Cholerae CheY3
Descriptor: Chemotaxis protein CheY, MAGNESIUM ION
Authors:Biswas, M, Dasgupta, J, Sen, U.
Deposit date:2013-03-19
Release date:2014-04-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Conformational barrier of CheY3 and inability of CheY4 to bind FliM control the flagellar motor action in Vibrio cholerae
Plos One, 8, 2013
3W7Z
DownloadVisualize
BU of 3w7z by Molmil
1.15A structure of human 2Zn insulin at 293K
Descriptor: Insulin, ZINC ION
Authors:Hoshikawa, N, Sasaki, K, Sakabe, N, Sakabe, K.
Deposit date:2013-03-11
Release date:2013-07-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:1.15A structure of human 2Zn insulin at 293K
To be Published
3N7O
DownloadVisualize
BU of 3n7o by Molmil
X-ray structure of human chymase in complex with small molecule inhibitor.
Descriptor: (S)-[(1S)-1-(5-chloro-1-benzothiophen-3-yl)-2-{[(E)-2-(3,4-difluorophenyl)ethenyl]amino}-2-oxoethyl]methylphosphinic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chymase, ...
Authors:Abad, M.C, Kervinen, J, Crysler, C, Bayoumy, S, Spurlino, J, Deckman, I, Greco, M.N, Maryanoff, B.E, Degaravilla, L.
Deposit date:2010-05-27
Release date:2010-07-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Potency variation of small-molecule chymase inhibitors across species.
Biochem. Pharmacol., 80, 2010
3WVM
DownloadVisualize
BU of 3wvm by Molmil
The 0.88 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with stearic acid
Descriptor: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ...
Authors:Sugiyama, S, Matsuoka, S, Mizohata, E, Matsuoka, D, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Matsumura, H, Murakami, S, Inoue, T, Murata, M.
Deposit date:2014-05-25
Release date:2015-01-28
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (0.88 Å)
Cite:Water-mediated recognition of simple alkyl chains by heart-type fatty-acid-binding protein.
Angew.Chem.Int.Ed.Engl., 54, 2015
4J9C
DownloadVisualize
BU of 4j9c by Molmil
Crystal structure of the Abl-SH3 domain H59Q-N96T mutant complexed with the designed high-affinity peptide ligand P17
Descriptor: DI(HYDROXYETHYL)ETHER, P17, TRIETHYLENE GLYCOL, ...
Authors:Camara-Artigas, A.
Deposit date:2013-02-16
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.051 Å)
Cite:Crystal structure of the Abl-SH3 domain H59Q-N96T mutant complexed with the designed high-affinity peptide ligand P17
To be Published
4JP8
DownloadVisualize
BU of 4jp8 by Molmil
Crystal structure of Pro-F17H/S324A
Descriptor: CALCIUM ION, Tk-subtilisin
Authors:Yuzaki, K, You, D.J, Uehara, R, Koga, Y, Kanaya, S.
Deposit date:2013-03-19
Release date:2014-01-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Increase in activation rate of Pro-Tk-subtilisin by a single nonpolar-to-polar amino acid substitution at the hydrophobic core of the propeptide domain
Protein Sci., 22, 2013
3WVY
DownloadVisualize
BU of 3wvy by Molmil
Structure of D48A hen egg white lysozyme in complex with (GlcNAc)4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lysozyme C
Authors:Kawaguchi, Y, Yoneda, K, Araki, T.
Deposit date:2014-06-11
Release date:2015-06-10
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:The role of Asp48 in the hydrogen bonding network involving Asp52 of hen egg white lysozyme
TO BE PUBLISHED
3EV2
DownloadVisualize
BU of 3ev2 by Molmil
Crystal Structure of Ribonuclease A in 70% Isopropanol
Descriptor: ISOPROPYL ALCOHOL, Ribonuclease pancreatic
Authors:Dechene, M, Wink, G, Smith, M, Swartz, P, Mattos, C.
Deposit date:2008-10-12
Release date:2009-06-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Multiple solvent crystal structures of ribonuclease A: An assessment of the method
Proteins, 76, 2009
4FH7
DownloadVisualize
BU of 4fh7 by Molmil
Structure of DHP A in complex with 2,4,6-tribromophenol in 20% methanol
Descriptor: 2,4,6-TRIBROMOPHENOL, Dehaloperoxidase A, METHANOL, ...
Authors:de Serrano, V.S, Franzen, S.
Deposit date:2012-06-05
Release date:2013-03-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural and Kinetic Study of an Internal Substrate Binding Site in Dehaloperoxidase-Hemoglobin A from Amphitrite ornata.
Biochemistry, 52, 2013
3EV5
DownloadVisualize
BU of 3ev5 by Molmil
Crystal Structure of Ribonuclease A in 1M Trimethylamine N-Oxide
Descriptor: Ribonuclease pancreatic, trimethylamine oxide
Authors:Dechene, M, Wink, G, Smith, M, Swartz, P, Mattos, C.
Deposit date:2008-10-12
Release date:2009-06-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Multiple solvent crystal structures of ribonuclease A: An assessment of the method
Proteins, 76, 2009
3W9G
DownloadVisualize
BU of 3w9g by Molmil
Crystal structure of the ankyrin repeat domain of chicken TRPV4
Descriptor: Vanilloid receptor-related osmotically activated channel protein
Authors:Itoh, Y, Hamada-nakahara, S, Suetsugu, S.
Deposit date:2013-04-04
Release date:2014-04-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:TRPV4 channel activity is modulated by direct interaction of the ankyrin domain to PI(4,5)P2
Nat Commun, 5, 2014
3EGF
DownloadVisualize
BU of 3egf by Molmil
SOLUTION STRUCTURE OF MURINE EPIDERMAL GROWTH FACTOR DETERMINED BY NMR SPECTROSCOPY AND REFINED BY ENERGY MINIMIZATION WITH RESTRAINTS
Descriptor: EPIDERMAL GROWTH FACTOR
Authors:Montelione, G.T, Wuthrich, K, Scheraga, H.A.
Deposit date:1992-08-30
Release date:1994-01-31
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure of murine epidermal growth factor determined by NMR spectroscopy and refined by energy minimization with restraints.
Biochemistry, 31, 1992
3NAU
DownloadVisualize
BU of 3nau by Molmil
Crystal structure of ZHX2 HD2 (zinc-fingers and homeoboxes protein 2, homeodomain 2)
Descriptor: SULFATE ION, Zinc fingers and homeoboxes protein 2
Authors:Ren, J, Bird, L.E, Owens, R.J, Stammers, D.K, Oxford Protein Production Facility (OPPF)
Deposit date:2010-06-02
Release date:2010-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Novel structural features in two ZHX homeodomains derived from a systematic study of single and multiple domains
Bmc Struct.Biol., 10, 2010
3EST
DownloadVisualize
BU of 3est by Molmil
STRUCTURE OF NATIVE PORCINE PANCREATIC ELASTASE AT 1.65 ANGSTROMS RESOLUTION
Descriptor: CALCIUM ION, PORCINE PANCREATIC ELASTASE, SULFATE ION
Authors:Meyer, E.F, Cole, G, Radhakrishnan, R, Epp, O.
Deposit date:1987-09-17
Release date:1988-01-16
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of native porcine pancreatic elastase at 1.65 A resolutions.
Acta Crystallogr.,Sect.B, 44, 1988
4FL8
DownloadVisualize
BU of 4fl8 by Molmil
HIV-1 protease complexed with gem-diol-amine tetrahedral intermediate
Descriptor: CHLORIDE ION, GLYCEROL, HIV-1 protease, ...
Authors:Tie, Y.F, Shen, C.H, Weber, I.T.
Deposit date:2012-06-14
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Capturing the Reaction Pathway in Near-Atomic-Resolution Crystal Structures of HIV-1 Protease.
Biochemistry, 51, 2012
4EZN
DownloadVisualize
BU of 4ezn by Molmil
Crystal structure of the substrate binding domain of E.coli DnaK in complex with pyrrhocoricin
Descriptor: Chaperone protein DnaK, Pyrrhocoricin
Authors:Zahn, M, Straeter, N.
Deposit date:2012-05-03
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Studies on the Forward and Reverse Binding Modes of Peptides to the Chaperone DnaK.
J.Mol.Biol., 425, 2013
4EZX
DownloadVisualize
BU of 4ezx by Molmil
Crystal structure of the substrate binding domain of E.coli DnaK in complex with the designer peptide NRLMLTG
Descriptor: Chaperone protein DnaK, SULFATE ION, synthetic peptide NRLMLTG
Authors:Zahn, M, Straeter, N.
Deposit date:2012-05-03
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Studies on the Forward and Reverse Binding Modes of Peptides to the Chaperone DnaK.
J.Mol.Biol., 425, 2013
3EXY
DownloadVisualize
BU of 3exy by Molmil
Crystal structure of the 2[4Fe-4S] ferredoxin V13G variant from allochromatium vinosum
Descriptor: Ferredoxin, IRON/SULFUR CLUSTER
Authors:Giastas, P, Saridakis, E, Mavridis, I.M.
Deposit date:2008-10-17
Release date:2009-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Insight into the protein and solvent contributions to the reduction potentials of [4Fe-4S]2+/+ clusters: crystal structures of the Allochromatium vinosum ferredoxin variants C57A and V13G and the homologous Escherichia coli ferredoxin.
J.Biol.Inorg.Chem., 14, 2009
3EXD
DownloadVisualize
BU of 3exd by Molmil
Sulfur-SAD phased HEWL Crystal
Descriptor: Lysozyme C
Authors:Nascimento, A.S, Liberato, M.V, Polikarpov, I.
Deposit date:2008-10-16
Release date:2008-10-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:The MX2 macromolecular crystallography beamline: a wiggler X-ray source at the LNLS.
J.Synchrotron Radiat., 16, 2009

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon