Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5E4I
DownloadVisualize
BU of 5e4i by Molmil
Crystal structure of mouse CNTN5 Ig1-Ig4 domains
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Contactin-5
Authors:Nikolaienko, R.M, Bouyain, S.
Deposit date:2015-10-06
Release date:2016-08-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Interactions Between Contactin Family Members and Protein-tyrosine Phosphatase Receptor Type G in Neural Tissues.
J.Biol.Chem., 291, 2016
5EO9
DownloadVisualize
BU of 5eo9 by Molmil
Crystal Structure of the complex of Dpr6 Domain 1 bound to DIP-alpha Domain 1+2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CG32791, isoform A, ...
Authors:Ozkan, E, Zinn, K, Garcia, K.C.
Deposit date:2015-11-10
Release date:2016-01-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2988 Å)
Cite:Control of Synaptic Connectivity by a Network of Drosophila IgSF Cell Surface Proteins.
Cell, 163, 2015
5UV6
DownloadVisualize
BU of 5uv6 by Molmil
Crystal structure of human Opioid Binding Protein/Cell Adhesion Molecule Like (OPCML)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Opioid-binding protein/cell adhesion molecule, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Birtley, J.R, Stern, L.J, Gabra, H, Zanini, E.
Deposit date:2017-02-19
Release date:2018-03-21
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.65002 Å)
Cite:Inactivating mutations and X-ray crystal structure of the tumor suppressor OPCML reveal cancer-associated functions.
Nat Commun, 10, 2019
1BIH
DownloadVisualize
BU of 1bih by Molmil
CRYSTAL STRUCTURE OF THE INSECT IMMUNE PROTEIN HEMOLIN: A NEW DOMAIN ARRANGEMENT WITH IMPLICATIONS FOR HOMOPHILIC ADHESION
Descriptor: HEMOLIN, PHOSPHATE ION
Authors:Su, X.-D, Gastinel, L.N, Vaughn, D.E, Faye, I, Poon, P, Bjorkman, P.J.
Deposit date:1998-06-17
Release date:1998-10-14
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of hemolin: a horseshoe shape with implications for homophilic adhesion.
Science, 281, 1998
3DMK
DownloadVisualize
BU of 3dmk by Molmil
Crystal structure of Down Syndrome Cell Adhesion Molecule (DSCAM) isoform 1.30.30, N-terminal eight Ig domains
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Down Syndrome Cell Adhesion Molecule (DSCAM) isoform 1.30.30, ...
Authors:Sawaya, M.R, Wojtowicz, W.M, Eisenberg, D, Zipursky, S.L.
Deposit date:2008-07-01
Release date:2008-10-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (4.19 Å)
Cite:A double S shape provides the structural basis for the extraordinary binding specificity of Dscam isoforms.
Cell(Cambridge,Mass.), 134, 2008
1CS6
DownloadVisualize
BU of 1cs6 by Molmil
N-TERMINAL FRAGMENT OF AXONIN-1 FROM CHICKEN
Descriptor: AXONIN-1, GLYCEROL
Authors:Freigang, J, Proba, K, Diederichs, K, Sonderegger, P, Welte, W.
Deposit date:1999-08-17
Release date:2000-05-19
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of the ligand binding module of axonin-1/TAG-1 suggests a zipper mechanism for neural cell adhesion.
Cell(Cambridge,Mass.), 101, 2000
6NRR
DownloadVisualize
BU of 6nrr by Molmil
Crystal structure of Dpr11 IG1 bound to DIP-gamma IG+IG2
Descriptor: Defective proboscis extension response 11, isoform B, Dpr-interacting protein gamma, ...
Authors:Cheng, S, Park, Y.J, Kurleto, J.D, Ozkan, E.
Deposit date:2019-01-24
Release date:2019-02-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular basis of synaptic specificity by immunoglobulin superfamily receptors in Drosophila.
Elife, 8, 2019
6NRW
DownloadVisualize
BU of 6nrw by Molmil
Crystal structure of Dpr1 IG1 bound to DIP-eta IG1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Cheng, S, Park, Y.J, Kurleto, J.D, Ozkan, E.
Deposit date:2019-01-24
Release date:2019-02-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular basis of synaptic specificity by immunoglobulin superfamily receptors in Drosophila.
Elife, 8, 2019
1QZ1
DownloadVisualize
BU of 1qz1 by Molmil
Crystal Structure of the Ig 1-2-3 fragment of NCAM
Descriptor: Neural cell adhesion molecule 1, 140 kDa isoform
Authors:Soroka, V, Kolkova, K, Kastrup, J.S, Diederichs, K, Breed, J, Kiselyov, V.V, Poulsen, F.M, Larsen, I.K, Welte, W, Berezin, V, Bock, E, Kasper, C.
Deposit date:2003-09-15
Release date:2003-11-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and interactions of NCAM Ig1-2-3 suggest a novel zipper mechanism for homophilic adhesion
Structure, 11, 2003
3ZYO
DownloadVisualize
BU of 3zyo by Molmil
Crystal structure of the N-terminal leucine rich repeats and immunoglobulin domain of netrin-G ligand-3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4B, ZINC ION
Authors:Seiradake, E, Coles, C.H, Perestenko, P.V, Harlos, K, McIlhinney, R.A.J, Aricescu, A.R, Jones, E.Y.
Deposit date:2011-08-24
Release date:2011-10-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Basis for Cell Surface Patterning Through Netring-Ngl Interactions.
Embo J., 30, 2011
3JXA
DownloadVisualize
BU of 3jxa by Molmil
Immunoglobulin domains 1-4 of mouse CNTN4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Contactin 4
Authors:Bouyain, S.
Deposit date:2009-09-18
Release date:2009-12-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.403 Å)
Cite:The protein tyrosine phosphatases PTPRZ and PTPRG bind to distinct members of the contactin family of neural recognition molecules.
Proc.Natl.Acad.Sci.USA, 107, 2010
2OM5
DownloadVisualize
BU of 2om5 by Molmil
N-Terminal Fragment of Human TAX1
Descriptor: Contactin 2
Authors:Moertl, M, Sonderegger, P, Diederichs, K, Welte, W.
Deposit date:2007-01-20
Release date:2007-11-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:The crystal structure of the ligand-binding module of human TAG-1 suggests a new mode of homophilic interaction
Protein Sci., 16, 2007
3LAF
DownloadVisualize
BU of 3laf by Molmil
Structure of DCC, a netrin-1 receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Deleted in Colorectal Cancer, SULFATE ION, ...
Authors:Chen, Q, Liu, J.-H, Wang, J.-H.
Deposit date:2010-01-06
Release date:2011-03-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:N-terminal horseshoe conformation of DCC is functionally required for axon guidance and might be shared by other neural receptors.
J.Cell.Sci., 126, 2013
2YD4
DownloadVisualize
BU of 2yd4 by Molmil
Crystal structure of the N-terminal Ig1-2 module of Chicken Receptor Protein Tyrosine Phosphatase Sigma
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, PROTEIN-TYROSINE PHOSPHATASE CRYPALPHA1 ISOFORM, ...
Authors:Coles, C.H, Shen, Y, Tenney, A.P, Siebold, C, Sutton, G.C, Lu, W, Gallagher, J.T, Jones, E.Y, Flanagan, J.G, Aricescu, A.R.
Deposit date:2011-03-17
Release date:2011-04-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Proteoglycan-Specific Molecular Switch for Rptp Sigma Clustering and Neuronal Extension.
Science, 332, 2011
6EG0
DownloadVisualize
BU of 6eg0 by Molmil
Crystal structure of Dpr4 Ig1-Ig2 in complex with DIP-Eta Ig1-Ig3
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Cosmanescu, F, Shapiro, L.
Deposit date:2018-08-17
Release date:2018-11-28
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Neuron-Subtype-Specific Expression, Interaction Affinities, and Specificity Determinants of DIP/Dpr Cell Recognition Proteins.
Neuron, 100, 2018
6EFY
DownloadVisualize
BU of 6efy by Molmil
Crystal Structure of DIP-Alpha Ig1-3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Dpr-interacting protein alpha, isoform A, ...
Authors:Cosmanescu, F, Shapiro, L.
Deposit date:2018-08-17
Release date:2018-11-28
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Neuron-Subtype-Specific Expression, Interaction Affinities, and Specificity Determinants of DIP/Dpr Cell Recognition Proteins.
Neuron, 100, 2018
6F2O
DownloadVisualize
BU of 6f2o by Molmil
Crystal structure of mouse SALM5 adhesion protein extracellular LRR-Ig domain fragment
Descriptor: Leucine-rich repeat and fibronectin type-III domain-containing protein 5
Authors:Karki, S, Paudel, P, Sele, C, Kajander, T.
Deposit date:2017-11-25
Release date:2018-06-27
Last modified:2018-10-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of SALM5 suggests a dimeric assembly for the presynaptic RPTP ligand recognition.
Protein Eng. Des. Sel., 31, 2018
7YR5
DownloadVisualize
BU of 7yr5 by Molmil
Embigin facilitates monocarboxylate transporter 1 localization to plasma membrane and transition to a decoupling state
Descriptor: Embigin, Monocarboxylate transporter 1
Authors:Xu, B, Ye, S.
Deposit date:2022-08-08
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.63 Å)
Cite:Embigin facilitates monocarboxylate transporter 1 localization to the plasma membrane and transition to a decoupling state.
Cell Rep, 40, 2022
8A0Y
DownloadVisualize
BU of 8a0y by Molmil
Crystal structure of mouse contactin 2 immunoglobulin domains
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Contactin-2, ...
Authors:Chataigner, L.M.P, Janssen, B.J.C.
Deposit date:2022-05-30
Release date:2023-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Contactin 2 homophilic adhesion structure and conformational plasticity.
Structure, 32, 2024
1YA5
DownloadVisualize
BU of 1ya5 by Molmil
Crystal structure of the titin domains z1z2 in complex with telethonin
Descriptor: N2B-TITIN ISOFORM, SULFATE ION, TELETHONIN
Authors:Pinotsis, N, Popov, A, Zou, P, Wilmanns, M.
Deposit date:2004-12-17
Release date:2005-12-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.445 Å)
Cite:Palindromic assembly of the giant muscle protein titin in the sarcomeric Z-disk
Nature, 439, 2006
5XNP
DownloadVisualize
BU of 5xnp by Molmil
Crystal structures of human SALM5 in complex with human PTPdelta
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
Authors:Liu, H, Lin, Z, Xu, F.
Deposit date:2017-05-24
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.729 Å)
Cite:Structural basis of SALM5-induced PTP delta dimerization for synaptic differentiation
Nat Commun, 9, 2018
5XWU
DownloadVisualize
BU of 5xwu by Molmil
Crystal structure of PTPdelta Ig1-Ig3 in complex with SALM2 LRR-Ig
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Goto-Ito, S, Yamagata, A, Sato, Y, Fukai, S.
Deposit date:2017-06-30
Release date:2018-06-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.162 Å)
Cite:Structural basis of trans-synaptic interactions between PTP delta and SALMs for inducing synapse formation.
Nat Commun, 9, 2018
5XNQ
DownloadVisualize
BU of 5xnq by Molmil
Crystal structures of human SALM5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
Authors:Liu, H, Lin, Z, Xu, F.
Deposit date:2017-05-24
Release date:2018-01-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Structural basis of SALM5-induced PTP delta dimerization for synaptic differentiation
Nat Commun, 9, 2018
5XWX
DownloadVisualize
BU of 5xwx by Molmil
Crystal structure of the four N-terminal immunoglogulin domains of Sidekick-1 protein
Descriptor: Protein sidekick-1
Authors:Tang, H, Dong, Y, He, Y.
Deposit date:2017-06-30
Release date:2018-08-29
Last modified:2018-09-26
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Architecture of cell-cell adhesion mediated by sidekicks.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5XWS
DownloadVisualize
BU of 5xws by Molmil
Crystal structure of SALM5 LRR-Ig
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Leucine-rich repeat and fibronectin type-III domain-containing protein 5
Authors:Goto-Ito, S, Yamagata, A, Sato, Y, Fukai, S.
Deposit date:2017-06-30
Release date:2018-06-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.084 Å)
Cite:Structural basis of trans-synaptic interactions between PTP delta and SALMs for inducing synapse formation.
Nat Commun, 9, 2018

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon