PDB: 72150 resultsInfo pagesStatus searchChemie searchBIRD

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7A29	Cryo-EM structure of the SARS-CoV-2 spike protein bound to neutralizing sybodies (Sb23) 2-up conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Neutralising sybody (Sb23), ... Authors: Hallberg, B.M, Das, H. Deposit date: 2020-08-16 Release date: 2020-10-21 Last modified: 2020-11-18 Method: ELECTRON MICROSCOPY (2.94 Å) Cite: Selection, biophysical and structural analysis of synthetic nanobodies that effectively neutralize SARS-CoV-2. Nat Commun, 11, 2020
1CY2	COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH TPTPTP3' Descriptor: DNA TOPOISOMERASE I, PHOSPHATE ION, THYMIDINE-5'-PHOSPHATE Authors: Feinberg, H, Changela, A, Mondragon, A. Deposit date: 1999-08-31 Release date: 2000-03-08 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Protein-nucleotide interactions in E. coli DNA topoisomerase I. Nat.Struct.Biol., 6, 1999
1CY8	COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH 5'-THYMIDINE MONOPHOSPHATE AND 3'-THYMIDINE MONOPHOSPHATE Descriptor: DNA TOPOISOMERASE I, PHOSPHATE ION, THYMIDINE-3'-PHOSPHATE, ... Authors: Feinberg, H, Changela, A, Mondragon, A. Deposit date: 1999-08-31 Release date: 2000-03-08 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.45 Å) Cite: Protein-nucleotide interactions in E. coli DNA topoisomerase I. Nat.Struct.Biol., 6, 1999
1CYY	CRYSTAL STRUCTURE OF THE 30 KDA FRAGMENT OF E. COLI DNA TOPOISOMERASE I. HEXAGONAL FORM Descriptor: DNA TOPOISOMERASE I, ZINC ION Authors: Feinberg, H, Lima, C, Mondragon, A. Deposit date: 1999-08-31 Release date: 2000-03-08 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Conformational changes in E. coli DNA topoisomerase I. Nat.Struct.Biol., 6, 1999
6W2X	CryoEM Structure of Inactive GABAB Heterodimer Descriptor: (1S)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Papasergi-Scott, M.M, Robertson, M.J, Skiniotis, G. Deposit date: 2020-03-08 Release date: 2020-07-01 Last modified: 2020-08-26 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Structures of metabotropic GABABreceptor. Nature, 584, 2020
1CY6	COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH 3' THYMIDINE MONOPHOSPHATE Descriptor: DNA TOPOISOMERASE I, PHOSPHATE ION, THYMIDINE-3'-PHOSPHATE Authors: Feinberg, H, Changela, A, Mondragon, A. Deposit date: 1999-08-31 Release date: 2000-03-08 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Protein-nucleotide interactions in E. coli DNA topoisomerase I. Nat.Struct.Biol., 6, 1999
1CY7	COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH 5'-THYMIDINE MONOPHOSPHATE Descriptor: DNA TOPOISOMERASE I, PHOSPHATE ION, THYMIDINE-5'-PHOSPHATE Authors: Feinberg, H, Changela, A, Mondragon, A. Deposit date: 1999-08-31 Release date: 2000-03-08 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Protein-nucleotide interactions in E. coli DNA topoisomerase I. Nat.Struct.Biol., 6, 1999
1CF8	Convergence of catalytic antibody and terpene cyclase mechanisms: polyene cyclization directed by carbocation-pi interactions Descriptor: 4-{4-[2-(1A,7A-DIMETHYL-4-OXY-OCTAHYDRO-1-OXA-4-AZA-CYCLOPROPA[A]NAPHTHALEN-4-YL) -ACETYLAMINO]-PHENYLCARBAMOYL}-BUTYRIC ACID, CADMIUM ION, PROTEIN (CATALYTIC ANTIBODY 19A4 (HEAVY CHAIN)), ... Authors: Paschall, C.M, Hasserodt, J, Jones, T, Lerner, R.A, Janda, K.D, Christianson, D.W. Deposit date: 1999-03-24 Release date: 1999-07-28 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Convergence of Catalytic Antibody and Terpene Cyclase Mechanisms: Polyene Cyclization Directed by Carbocation-pi Interactions Angew.Chem.Int.Ed.Engl., 38, 1999
1CY4	COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH 5'pTpTpTp3' Descriptor: DNA TOPOISOMERASE I, PHOSPHATE ION, THYMIDINE-5'-PHOSPHATE Authors: Feinberg, H, Changela, A, Mondragon, A. Deposit date: 1999-08-31 Release date: 2000-03-08 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Protein-nucleotide interactions in E. coli DNA topoisomerase I. Nat.Struct.Biol., 6, 1999
1CY9	CRYSTAL STRUCTURE OF THE 30 KDA FRAGMENT OF E. COLI DNA TOPOISOMERASE I. MONOCLINIC FORM Descriptor: DNA TOPOISOMERASE I Authors: Feinberg, H, Lima, C, Mondragon, A. Deposit date: 1999-08-31 Release date: 2000-03-08 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Conformational changes in E. coli DNA topoisomerase I. Nat.Struct.Biol., 6, 1999
8XIY	Crystal structure of an omega-transaminase mutant I77L/Q97E/H210N/N245D from Aspergillus terreus in complex with PLP Descriptor: D-aminoacid aminotransferase-like PLP-dependent enzyme, PYRIDOXAL-5'-PHOSPHATE Authors: Lu, Z.Y, Hu, D, Xu, D.Z, He, Y.C. Deposit date: 2023-12-20 Release date: 2024-02-07 Method: X-RAY DIFFRACTION (2.09 Å) Cite: Efficient bioamination with an omega-transaminase mutant from Aspergillus terreus To Be Published
1CY1	COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH 5'PTPTPT Descriptor: DNA TOPOISOMERASE I, PHOSPHATE ION, THYMIDINE-3',5'-DIPHOSPHATE, ... Authors: Feinberg, H, Changela, A, Mondragon, A. Deposit date: 1999-08-31 Release date: 2000-03-03 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Protein-nucleotide interactions in E. coli DNA topoisomerase I. Nat.Struct.Biol., 6, 1999
6QKC	GluA1/2 In complex with auxiliary subunit gamma-8 Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 6-nitro-2,3-bis(oxidanylidene)-1,4-dihydrobenzo[f]quinoxaline-7-sulfonamide, Glutamate receptor 1, ... Authors: Herguedas, B, Garcia-Nafria, J, Greger, I.G. Deposit date: 2019-01-28 Release date: 2019-03-27 Last modified: 2020-07-29 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Architecture of the heteromeric GluA1/2 AMPA receptor in complex with the auxiliary subunit TARP gamma 8. Science, 364, 2019
3GOQ	Crystal structure of the Tyr13Met variant of Bacillus subtilis ferrochelatase Descriptor: Ferrochelatase, MAGNESIUM ION Authors: Karlberg, T, Hansson, M.D, Hansson, M, Al-Karadaghi, S. Deposit date: 2009-03-19 Release date: 2010-03-31 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Crystal structure of the Tyr13Met variant of Bacillus subtilis ferrochelatase To be Published
1DIK	PYRUVATE PHOSPHATE DIKINASE Descriptor: PYRUVATE PHOSPHATE DIKINASE, SULFATE ION Authors: Herzberg, O, Chen, C.C.H. Deposit date: 1995-12-06 Release date: 1996-04-03 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Swiveling-domain mechanism for enzymatic phosphotransfer between remote reaction sites. Proc.Natl.Acad.Sci.USA, 93, 1996
3GSZ	Structure of the genotype 2B HCV polymerase Descriptor: RNA-directed RNA polymerase Authors: Rydberg, E.H, Carfi, A. Deposit date: 2009-03-27 Release date: 2009-07-07 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural basis for resistance of the genotype 2b hepatitis C virus NS5B polymerase to site A non-nucleoside inhibitors. J.Mol.Biol., 390, 2009
1DZX	L-Fuculose-1-Phosphate Aldolase from Escherichia coli Mutant R212A Descriptor: BETA-MERCAPTOETHANOL, L-fuculose phosphate aldolase, SULFATE ION, ... Authors: Joerger, A.C, Schulz, G.E. Deposit date: 2000-03-07 Release date: 2000-06-02 Last modified: 2019-09-25 Method: X-RAY DIFFRACTION (2.18 Å) Cite: Catalytic Action of Fuculose 1-Phosphate Aldolase (Class II) as Derived from Structure-Directed Mutagenesis Biochemistry, 39, 2000
1DZW	L-Fuculose-1-Phosphate Aldolase from Escherichia coli Mutant F131A Descriptor: BETA-MERCAPTOETHANOL, L-fuculose phosphate aldolase, SULFATE ION, ... Authors: Joerger, A.C, Schulz, G.E. Deposit date: 2000-03-07 Release date: 2000-06-02 Last modified: 2019-09-25 Method: X-RAY DIFFRACTION (2.17 Å) Cite: Catalytic Action of Fuculose 1-Phosphate Aldolase (Class II) as Derived from Structure-Directed Mutagenesis Biochemistry, 39, 2000
3FCT	MATURE METAL CHELATASE CATALYTIC ANTIBODY WITH HAPTEN Descriptor: CADMIUM ION, CALCIUM ION, MAGNESIUM ION, ... Authors: Romesberg, F.E, Santarsiero, B.D, Barnes, D, Yin, J, Spiller, B, Schultz, P.G, Stevens, R.C. Deposit date: 1999-06-13 Release date: 1999-06-23 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structural and kinetic evidence for strain in biological catalysis. Biochemistry, 37, 1998
1B4K	High resolution crystal structure of a MG2-dependent 5-aminolevulinic acid dehydratase Descriptor: LAEVULINIC ACID, MAGNESIUM ION, PROTEIN (5-AMINOLEVULINIC ACID DEHYDRATASE), ... Authors: Frankenberg, N, Jahn, D, Heinz, D.W. Deposit date: 1998-12-22 Release date: 1999-07-13 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (1.67 Å) Cite: High resolution crystal structure of a Mg2+-dependent porphobilinogen synthase. J.Mol.Biol., 289, 1999
3EDC	Crystal Structure of a 1.6-hexanediol Bound Tetrameric Form of Escherichia coli Lac-repressor Refined to 2.1 Resolution Descriptor: HEXANE-1,6-DIOL, Lactose operon repressor Authors: Stenberg, K.A.E. Deposit date: 2008-09-03 Release date: 2008-11-25 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal structure of a 1.6-hexanediol bound tetrameric form of Escherichia coli lac-repressor refined to 2.1 A resolution Proteins, 75, 2009
1CY0	COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH 3'-5'-ADENOSINE DIPHOSPHATE Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, DNA TOPOISOMERASE I Authors: Feinberg, H, Changela, A, Mondragon, A. Deposit date: 1999-08-31 Release date: 2000-03-08 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.45 Å) Cite: Protein-nucleotide interactions in E. coli DNA topoisomerase I. Nat.Struct.Biol., 6, 1999
1DZV	L-Fuculose-1-Phosphate Aldolase from Escherichia coli Mutant Y113F/Y209F Descriptor: BETA-MERCAPTOETHANOL, L-fuculose phosphate aldolase, SULFATE ION, ... Authors: Joerger, A.C, Schulz, G.E. Deposit date: 2000-03-07 Release date: 2000-06-02 Last modified: 2019-09-25 Method: X-RAY DIFFRACTION (1.86 Å) Cite: Catalytic Action of Fuculose 1-Phosphate Aldolase (Class II) as Derived from Structure-Directed Mutagenesis Biochemistry, 39, 2000
1DZU	L-Fuculose-1-Phosphate Aldolase from Escherichia coli Mutant T26A Descriptor: BETA-MERCAPTOETHANOL, L-fuculose phosphate aldolase, SULFATE ION, ... Authors: Joerger, A.C, Schulz, G.E. Deposit date: 2000-03-07 Release date: 2000-06-02 Last modified: 2019-09-25 Method: X-RAY DIFFRACTION (2.09 Å) Cite: Catalytic Action of Fuculose 1-Phosphate Aldolase (Class II) as Derived from Structure-Directed Mutagenesis Biochemistry, 39, 2000
1DZY	L-Fuculose-1-Phosphate Aldolase from Escherichia coli Mutant E214A Descriptor: BETA-MERCAPTOETHANOL, L-FUCULOSE-1-PHOSPHATE ALDOLASE, SULFATE ION, ... Authors: Joerger, A.C, Schulz, G.E. Deposit date: 2000-03-07 Release date: 2000-06-02 Last modified: 2019-01-30 Method: X-RAY DIFFRACTION (2.44 Å) Cite: Catalytic Action of Fuculose 1-Phosphate Aldolase (Class II) as Derived from Structure-Directed Mutagenesis Biochemistry, 39, 2000

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