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7OMR
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BU of 7omr by Molmil
Crystal structure of coelenteramide-bound Renilla reniformis luciferase RLuc8-D162A variant
Descriptor: Coelenterazine h 2-monooxygenase, GLYCEROL, N-[3-BENZYL-5-(4-HYDROXYPHENYL)PYRAZIN-2-YL]-2-(4-HYDROXYPHENYL)ACETAMIDE
Authors:Schenkmayerova, A, Marek, M.
Deposit date:2021-05-24
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Catalytic mechanism for Renilla-type luciferases
Nat Catal, 2023
7P1N
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BU of 7p1n by Molmil
Crystal structure of human acetylcholinesterase in complex with (2R,3R,4S,5S,6R)-2-{4-[1-(4-{5-hydroxy-6-[(E)-(hydroxyimino)methyl]pyridin-2-yl}butyl)-1H-1,2,3-triazol-4-yl]butoxy}-6-(hydroxymethyl)oxane-3,4,5-triol oxime
Descriptor: (2R,3R,4S,5S,6R)-2-[4-[1-[4-[6-[(Z)-hydroxyiminomethyl]-5-oxidanyl-pyridin-2-yl]butyl]-1,2,3-triazol-4-yl]butoxy]-6-(hydroxymethyl)oxane-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase, ...
Authors:Da Silva, O, Dias, J, Nachon, F.
Deposit date:2021-07-02
Release date:2022-06-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:A New Class of Bi- and Trifunctional Sugar Oximes as Antidotes against Organophosphorus Poisoning.
J.Med.Chem., 65, 2022
7OMD
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BU of 7omd by Molmil
Crystal structure of azacoelenterazine-bound Renilla reniformis luciferase variant RLuc8-D162A
Descriptor: 6-(4-hydroxyphenyl)-2-[(4-hydroxyphenyl)methyl]-8-(phenylmethyl)-[1,2,4]triazolo[4,3-a]pyrazin-3-one, CHLORIDE ION, Coelenterazine h 2-monooxygenase, ...
Authors:Schenkmayerova, A, Janin, Y.L, Marek, M.
Deposit date:2021-05-21
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Catalytic mechanism for Renilla-type luciferases
Nat Catal, 2023
6XT1
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BU of 6xt1 by Molmil
The structure of the M60 catalytic domain from Clostridium perfringens ZmpC in complex the sialyl T antigen
Descriptor: 1,2-ETHANEDIOL, SERINE, ZINC ION, ...
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2020-07-16
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Molecular insights into architecturally complex glycopeptidases
Proc.Natl.Acad.Sci.USA, 2021
7OVX
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BU of 7ovx by Molmil
E3 RING ligase binding domain
Descriptor: E3 ubiquitin-protein ligase TRIM7, Peptide G
Authors:James, L.C.
Deposit date:2021-06-15
Release date:2022-06-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:E3 ligase targeting domain
To Be Published
4U74
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BU of 4u74 by Molmil
Crystal structure of 4-phenylimidazole bound form of human indoleamine 2,3-dioxygenase (G262A mutant)
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 4-PHENYL-1H-IMIDAZOLE, Indoleamine 2,3-dioxygenase 1, ...
Authors:Sugimoto, H, Horitani, M, Kometani, E, Shiro, Y.
Deposit date:2014-07-30
Release date:2015-09-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Conformation and Mobility of Active Site Loop is Critical for Substrate Binding and Inhibition in Human Indoleamine 2,3-Dioxygenase
to be published
7P80
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BU of 7p80 by Molmil
Crystal structure of ClpP from Bacillus subtilis in complex with ADEP2 (compressed state)
Descriptor: ADEP2, ATP-dependent Clp protease proteolytic subunit
Authors:Lee, B.-G, Kim, L, Kim, M.K, Kwon, D.H, Song, H.K.
Deposit date:2021-07-21
Release date:2022-06-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
7P81
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BU of 7p81 by Molmil
Crystal structure of ClpP from Bacillus subtilis in complex with ADEP2 (compact state)
Descriptor: ADEP2, ATP-dependent Clp protease proteolytic subunit
Authors:Lee, B.-G, Kim, L, Kim, M.K, Kwon, D.H, Song, H.K.
Deposit date:2021-07-21
Release date:2022-06-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
7P4E
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BU of 7p4e by Molmil
Crystal structure of PPARgamma in complex with compound FL217
Descriptor: 1,2-ETHANEDIOL, Peroxisome proliferator-activated receptor gamma, SULFATE ION, ...
Authors:Ni, X, Lillich, F, Proschak, E, Chaikuad, A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2021-07-11
Release date:2022-07-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-Based Design of Dual Partial Peroxisome Proliferator-Activated Receptor gamma Agonists/Soluble Epoxide Hydrolase Inhibitors.
J.Med.Chem., 64, 2021
7OJ1
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BU of 7oj1 by Molmil
Bacillus subtilis IMPDH in complex with Ap4A
Descriptor: BIS(ADENOSINE)-5'-TETRAPHOSPHATE, Inosine-5'-monophosphate dehydrogenase, MAGNESIUM ION
Authors:Giammarinaro, P.I, Bange, G.
Deposit date:2021-05-13
Release date:2022-09-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Diadenosine tetraphosphate regulates biosynthesis of GTP in Bacillus subtilis.
Nat Microbiol, 7, 2022
7OW2
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BU of 7ow2 by Molmil
E3 RING ligase binding domain with peptide
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase RNF187 peptide, E3 ubiquitin-protein ligase TRIM7, ...
Authors:James, L.C.
Deposit date:2021-06-16
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:E3 ligase targeting domain
To Be Published
7P0W
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BU of 7p0w by Molmil
Crystal structure of a trapped Pab-AGOG/double-standed DNA covalent intermediate (DNA containing thymine opposite to lesion)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*AP*GP*AP*AP*AP*TP*AP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*(PED)P*TP*TP*TP*CP*T)-3'), ...
Authors:Coste, F, Goffinont, S, Flament, D, Castaing, B.
Deposit date:2021-06-30
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Structural and functional determinants of the archaeal 8-oxoguanine-DNA glycosylase AGOG for DNA damage recognition and processing.
Nucleic Acids Res., 50, 2022
7OXE
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BU of 7oxe by Molmil
Crystal structure of the KDEL receptor bound to HDEF peptide at pH 6.0
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, ER lumen protein-retaining receptor 2, THR-ALA-GLU-HIS-ASP-GLU-PHE
Authors:Newstead, S, Parker, J.L.
Deposit date:2021-06-22
Release date:2022-07-13
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.283 Å)
Cite:Molecular basis for pH sensing in the KDEL trafficking receptor.
Structure, 32, 2024
7OJU
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BU of 7oju by Molmil
Chaetomium thermophilum Naa50 GNAT-domain in complex with bisubstrate analogue CoA-Ac-MVNAL
Descriptor: CARBOXYMETHYL COENZYME *A, GLYCEROL, HEXAETHYLENE GLYCOL, ...
Authors:Weidenhausen, J, Kopp, J, Sinning, I.
Deposit date:2021-05-17
Release date:2022-09-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Extended N-Terminal Acetyltransferase Naa50 in Filamentous Fungi Adds to Naa50 Diversity.
Int J Mol Sci, 23, 2022
7OYE
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BU of 7oye by Molmil
Crystal structure of the KDEL receptor bound to HDEL peptide at pH 7.0
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CARBON DIOXIDE, ER lumen protein-retaining receptor 2, ...
Authors:Newstead, S, Braeuer, P.
Deposit date:2021-06-24
Release date:2022-07-13
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Molecular basis for pH sensing in the KDEL trafficking receptor.
Structure, 32, 2024
6XQF
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BU of 6xqf by Molmil
Crystal structure of SCLam E144S mutant, a non-specific endo-beta-1,3(4)-glucanase from family GH16, co-crystallized with 1,3-beta-D-cellotriosyl-glucose, presenting a 1,3-beta-D-cellobiosyl-glucose at active site
Descriptor: CALCIUM ION, GH16 family protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-3)-alpha-D-glucopyranose
Authors:Liberato, M.V, Squina, F.
Deposit date:2020-07-09
Release date:2021-02-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Insights into the dual cleavage activity of the GH16 laminarinase enzyme class on beta-1,3 and beta-1,4 glycosidic bonds.
J.Biol.Chem., 296, 2021
7P5T
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BU of 7p5t by Molmil
Structure of CYP142 from Mycobacterium tuberculosis in complex with inhibitor MEK216
Descriptor: BROMIDE ION, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Snee, M, Kavanagh, M, Tunnicliffe, R, McLean, K, Levy, C, Munro, A.
Deposit date:2021-07-14
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of CYP142 from Mycobacterium tuberculosis in complex with inhibitor MEK216
To Be Published
7ONG
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BU of 7ong by Molmil
Crystal structure of the computationally designed SAKe6BE-L1 protein
Descriptor: CALCIUM ION, SAKe6BE-L1
Authors:Wouters, S.M.L, Noguchi, H, Velpula, G, Clarke, D.E, Voet, A.R.D, De Feyter, S.
Deposit date:2021-05-25
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published
7ON8
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BU of 7on8 by Molmil
Crystal structure of the computationally designed SAKe6AR protein
Descriptor: SAKe6AR
Authors:Wouters, S.M.L, Noguchi, H, Clarke, D.E, Voet, A.R.D, De Feyter, S.
Deposit date:2021-05-25
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published
7OPU
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BU of 7opu by Molmil
Self-assembled crystal structure of the computationally designed SAKe6BE-3HH protein
Descriptor: SAKe6BE-3HH
Authors:Wouters, S.M.L, Noguchi, H, Clarke, D.E, Voet, A.R.D, De Feyter, S.
Deposit date:2021-06-01
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published
7ONA
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BU of 7ona by Molmil
Crystal structure of the computationally designed SAKe6AC protein
Descriptor: CALCIUM ION, SAKe6AC
Authors:Wouters, S.M.L, Noguchi, H, Velpula, G, Clarke, D.E, Voet, A.R.D, De Feyter, S.
Deposit date:2021-05-25
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published
7ON7
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BU of 7on7 by Molmil
Crystal structure of the computationally designed SAKe6BE-L2 protein
Descriptor: SAKe6BE-L2
Authors:Wouters, S.M.L, Noguchi, H, Clarke, D.E, Voet, A.R.D, De Feyter, S.
Deposit date:2021-05-25
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published
7ONE
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BU of 7one by Molmil
Crystal structure of the self-assembled SAKe6BE designer protein
Descriptor: SAKe6BE
Authors:Wouters, S.M.L, Noguchi, H, Velpula, G, Clarke, D.E, Voet, A.R.D, De Feyter, S.
Deposit date:2021-05-25
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published
7ONC
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BU of 7onc by Molmil
Crystal structure of the computationally designed SAKe6BE protein
Descriptor: SAKe6BE
Authors:Wouters, S.M.L, Noguchi, H, Velpula, G, Clarke, D.E, Voet, A.R.D, De Feyter, S.
Deposit date:2021-05-25
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published
7ONH
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BU of 7onh by Molmil
Crystal structure of the computationally designed SAKe6BE-L3 protein
Descriptor: SAKe6BE-L3, SULFATE ION
Authors:Wouters, S.M.L, Noguchi, H, Velpula, G, Clarke, D.E, Voet, A.R.D, De Feyter, S.
Deposit date:2021-05-25
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published

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PDB entries from 2024-10-23

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