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3NWW
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BU of 3nww by Molmil
P38 Alpha kinase complexed with a 2-aminothiazol-5-yl-pyrimidine based inhibitor
Descriptor: 1-[2-(2-{[2-(dimethylamino)ethyl]amino}-6-{2-[(1-methylethyl)amino]-1,3-thiazol-5-yl}pyrimidin-4-yl)benzyl]-3-ethylurea, Mitogen-activated protein kinase 14
Authors:Sack, J.S.
Deposit date:2010-07-12
Release date:2010-09-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Utilization of a nitrogen-sulfur nonbonding interaction in the design of new 2-aminothiazol-5-yl-pyrimidines as p38alpha MAP kinase inhibitors.
Bioorg.Med.Chem.Lett., 20, 2010
1KF0
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BU of 1kf0 by Molmil
Crystal Structure of Pig Muscle Phosphoglycerate Kinase Ternary Complex with AMP-PCP and 3PG
Descriptor: 3-PHOSPHOGLYCERIC ACID, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Kovari, Z, Flachner, B, Naray-Szabo, G, Vas, M.
Deposit date:2001-11-19
Release date:2002-07-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic and thiol-reactivity studies on the complex of pig muscle phosphoglycerate kinase with ATP analogues: correlation between nucleotide binding mode and helix flexibility.
Biochemistry, 41, 2002
5EM4
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BU of 5em4 by Molmil
Structure of CYP2B4 F244W in a ligand free conformation
Descriptor: 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Cytochrome P450 2B4, PROTOPORPHYRIN IX CONTAINING FE
Authors:Shah, M.B, Stout, C.D, Halpert, J.R.
Deposit date:2015-11-05
Release date:2016-03-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Coumarin Derivatives as Substrate Probes of Mammalian Cytochromes P450 2B4 and 2B6: Assessing the Importance of 7-Alkoxy Chain Length, Halogen Substitution, and Non-Active Site Mutations.
Biochemistry, 55, 2016
8BLU
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BU of 8blu by Molmil
The PDZ domains of human SDCBP
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ALANINE, ...
Authors:Bradshaw, W.J, Katis, V.L, Daniel-Mozo, M, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2022-11-10
Release date:2022-11-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The PDZ domains of human SDCBP
To Be Published
8BEN
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BU of 8ben by Molmil
LRR domain Structure of the LRRC8C protein
Descriptor: Volume-regulated anion channel subunit LRRC8C
Authors:Sawicka, M, Dutzler, R.
Deposit date:2022-10-21
Release date:2022-12-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of a volume-regulated heteromeric LRRC8A/C channel.
Nat.Struct.Mol.Biol., 30, 2023
2ZVL
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BU of 2zvl by Molmil
Crystal structure of PCNA in complex with DNA polymerase kappa fragment
Descriptor: DNA polymerase kappa, Proliferating cell nuclear antigen, SULFATE ION, ...
Authors:Hishiki, A, Hashimoto, H, Hanafusa, T, Kamei, K, Ohashi, E, Shimizu, T, Ohmori, H, Sato, M.
Deposit date:2008-11-11
Release date:2009-02-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Novel Interactions between Human Translesion Synthesis Polymerases and Proliferating Cell Nuclear Antigen
J.Biol.Chem., 284, 2009
3ORX
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BU of 3orx by Molmil
PDK1 mutant bound to allosteric disulfide fragment inhibitor 1F8
Descriptor: 2-methyl-N-(2-sulfanylethyl)-1-benzofuran-3-carboxamide, 3-phosphoinositide-dependent protein kinase 1, CHLORIDE ION
Authors:Sadowsky, J.D, Wells, J.A.
Deposit date:2010-09-08
Release date:2011-03-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2044 Å)
Cite:Turning a protein kinase on or off from a single allosteric site via disulfide trapping.
Proc.Natl.Acad.Sci.USA, 108, 2011
8BLV
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BU of 8blv by Molmil
The PDZ domains of human SDCBP with a bound SDC4 C-terminal peptide
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Syndecan-4, ...
Authors:Bradshaw, W.J, Katis, V.L, Daniel-Mozo, M, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2022-11-10
Release date:2022-12-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The PDZ domains of human SDCBP with a bound SDC4 C-terminal peptide
To Be Published
3TG1
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BU of 3tg1 by Molmil
Crystal structure of p38alpha in complex with a MAPK docking partner
Descriptor: Dual specificity protein phosphatase 10, Mitogen-activated protein kinase 14
Authors:Zhang, Y.Y, Wu, J.W, Wang, Z.X.
Deposit date:2011-08-17
Release date:2012-03-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:A Distinct Interaction Mode Revealed by the Crystal Structure of the Kinase p38alpha with the MAPK Binding Domain of the Phosphatase MKP5.
Sci.Signal., 4, 2011
3TDH
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BU of 3tdh by Molmil
Structure of the regulatory fragment of sccharomyces cerevisiae AMPK in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Carbon catabolite-derepressing protein kinase, Nuclear protein SNF4, ...
Authors:Mayer, F.V, Heath, R, Underwood, E, Sanders, M.J, Carmena, D, McCartney, R, Leiper, F.C, Xiao, B, Jing, C, Walker, P.A, Haire, L.F, Ogrodowicz, R, Martin, S.R, Schmidt, M.C, Gamblin, S.J, Carling, D.
Deposit date:2011-08-11
Release date:2011-11-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:ADP Regulates SNF1, the Saccharomyces cerevisiae Homolog of AMP-Activated Protein Kinase.
Cell Metab, 14, 2011
8B8T
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BU of 8b8t by Molmil
Open conformation of the complex of DNA ligase I on PCNA and DNA in the presence of ATP
Descriptor: DNA ligase 1, Proliferating cell nuclear antigen
Authors:Blair, K, Tehseen, M, Raducanu, V.S, Shahid, T, Lancey, C, Cruehet, R, Hamdan, S, De Biasio, A.
Deposit date:2022-10-05
Release date:2023-01-11
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Mechanism of human Lig1 regulation by PCNA in Okazaki fragment sealing.
Nat Commun, 13, 2022
4BA9
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BU of 4ba9 by Molmil
The structural basis for the coordination of Y-family Translesion DNA Polymerases by Rev1
Descriptor: DNA POLYMERASE KAPPA, DNA REPAIR PROTEIN REV1, MAGNESIUM ION, ...
Authors:Grummitt, C.G, Kilkenny, M.L, Frey, A, Roe, S.M, Oliver, A.W, Sale, J.E, Pearl, L.H.
Deposit date:2012-09-12
Release date:2013-09-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:The Structural Basis for the Coordination of Y- Family Translesion DNA Polymerases by Rev1
To be Published
8BXX
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BU of 8bxx by Molmil
Crystal structure of formate dehydrogenase FDH2 enzyme from Granulicella mallensis MP5ACTX8 in complex with NAD and azide.
Descriptor: 1,2-ETHANEDIOL, AZIDE ION, Formate dehydrogenase, ...
Authors:Robescu, M.S, Rubini, R, Filippini, F, Bergantino, B, Cendron, L.
Deposit date:2022-12-10
Release date:2023-01-18
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:From the amelioration of a NADP+-dependent formate dehydrogenase to the discovery of a new enzyme: round trip from theory to practice
ChemCatChem, 2020
3BQ4
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BU of 3bq4 by Molmil
Crystal Structure of Ad35 fiber knob
Descriptor: Fiber
Authors:Pache, L, Venkataraman, S, Nemerow, G.R, Reddy, V.S.
Deposit date:2007-12-19
Release date:2008-06-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Conservation of fiber structure and CD46 usage by subgroup B2 adenoviruses
Virology, 375, 2008
8BKD
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BU of 8bkd by Molmil
structure of RutB
Descriptor: N-(AMINOCARBONYL)-BETA-ALANINE, Ureidoacrylate amidohydrolase RutB
Authors:Rajendran, C.
Deposit date:2022-11-09
Release date:2023-01-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and Functional Characterization of the Ureidoacrylate Amidohydrolase RutB from Escherichia coli .
Biochemistry, 62, 2023
3OEF
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BU of 3oef by Molmil
Crystal structure of Y323F inactive mutant of p38alpha MAP kinase
Descriptor: Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
Authors:Livnah, O, Tzarum, N.
Deposit date:2010-08-12
Release date:2011-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Active mutants of the TCR-mediated p38alpha alternative activation site show changes in the phosphorylation lip and DEF site formation.
J.Mol.Biol., 405, 2011
8BVL
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BU of 8bvl by Molmil
Crystal structure of the IBR-RING2 domain of HOIL-1
Descriptor: RanBP-type and C3HC4-type zinc finger-containing protein 1, ZINC ION
Authors:Stieglitz, B, Koliopoulos, M.G, Rittinger, K.
Deposit date:2022-12-04
Release date:2023-01-18
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structural basis for ubiquitylation by HOIL-1.
Front Mol Biosci, 9, 2022
8BLM
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BU of 8blm by Molmil
Structure of RutB
Descriptor: Ureidoacrylate amidohydrolase RutB
Authors:Rajendran, C.
Deposit date:2022-11-09
Release date:2023-01-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Functional Characterization of the Ureidoacrylate Amidohydrolase RutB from Escherichia coli .
Biochemistry, 62, 2023
4IUQ
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BU of 4iuq by Molmil
crystal structure of SHH1 SAWADEE domain
Descriptor: CYMAL-4, SAWADEE HOMEODOMAIN HOMOLOG 1, ZINC ION
Authors:Du, J, Patel, D.J.
Deposit date:2013-01-21
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.809 Å)
Cite:Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1.
Nature, 498, 2013
4IVY
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BU of 4ivy by Molmil
Crystal Structure of the Estrogen Receptor alpha Ligand-binding Domain in Complex with Dynamic WAY-derivative, 7a
Descriptor: 4-[1-(but-3-en-1-yl)-7-(trifluoromethyl)-1H-indazol-3-yl]benzene-1,3-diol, Estrogen receptor, Nuclear receptor coactivator 2
Authors:Nwachukwu, J.C, Srinivasan, S, Parent, A.A, Cavett, V, Nowak, J, Hughes, T.S, Kojetin, D.J, Katzenellenbogen, J.A, Nettles, K.W.
Deposit date:2013-01-23
Release date:2013-03-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Ligand binding dynamics rewire cellular signaling via Estrogen Receptor-alpha
Nat.Chem.Biol., 9, 2013
1LE8
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BU of 1le8 by Molmil
Crystal Structure of the MATa1/MATalpha2-3A Heterodimer Bound to DNA Complex
Descriptor: 5'-D(*AP*CP*AP*TP*GP*TP*AP*AP*AP*AP*AP*TP*TP*TP*AP*CP*AP*TP*CP*A)-3', 5'-D(*TP*TP*GP*AP*TP*GP*TP*AP*AP*AP*TP*TP*TP*TP*TP*AP*CP*AP*TP*G)-3', MATING-TYPE PROTEIN A-1, ...
Authors:Ke, A, Mathias, J.R, Vershon, A.K, Wolberger, C.
Deposit date:2002-04-09
Release date:2002-05-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Thermodynamic Characterization of the DNA Binding Properties of a Triple Alanine Mutant of MATalpha2
Structure, 10, 2002
4J5S
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BU of 4j5s by Molmil
TARG1 (C6orf130), Terminal ADP-ribose Glycohydrolase 1 ADP-ribose complex
Descriptor: 1,2-ETHANEDIOL, 1,3,2-DIOXABOROLAN-2-OL, BORATE ION, ...
Authors:Schellenberg, M.J, Appel, C.D, Krahn, J, Williams, R.S.
Deposit date:2013-02-09
Release date:2013-03-27
Last modified:2013-07-03
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Deficiency of terminal ADP-ribose protein glycohydrolase TARG1/C6orf130 in neurodegenerative disease.
Embo J., 32, 2013
1V0J
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BU of 1v0j by Molmil
Udp-galactopyranose mutase from Mycobacterium tuberculosis
Descriptor: BICINE, FLAVIN-ADENINE DINUCLEOTIDE, UDP-GALACTOPYRANOSE MUTASE
Authors:Beis, K, Naismith, J.H.
Deposit date:2004-03-30
Release date:2005-01-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structures of Mycobacteria tuberculosis and Klebsiella pneumoniae UDP-galactopyranose mutase in the oxidised state and Klebsiella pneumoniae UDP-galactopyranose mutase in the (active) reduced state.
J. Mol. Biol., 348, 2005
2ZB0
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BU of 2zb0 by Molmil
Crystal structure of P38 in complex with biphenyl amide inhibitor
Descriptor: GLYCEROL, Mitogen-activated protein kinase 14, N-(3-cyanophenyl)-2'-methyl-5'-(5-methyl-1,3,4-oxadiazol-2-yl)-4-biphenylcarboxamide
Authors:Somers, D.O.
Deposit date:2007-10-13
Release date:2008-01-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Biphenyl amide p38 kinase inhibitors 1: Discovery and binding mode
Bioorg.Med.Chem.Lett., 18, 2008
3OBJ
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BU of 3obj by Molmil
Conformational plasticity of p38 MAP kinase DFG mutants in response to inhibitor binding
Descriptor: 1-(5-TERT-BUTYL-2-METHYL-2H-PYRAZOL-3-YL)-3-(4-CHLORO-PHENYL)-UREA, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
Authors:Namboodiri, H.V, Karpusas, M, Bukhtiyarova, M, Springman, E.B.
Deposit date:2010-08-06
Release date:2010-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Conformational plasticity of p38 MAP kinase DFG motif mutants in response to inhibitor binding
To be Published

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