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1TTY
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BU of 1tty by Molmil
Solution structure of sigma A region 4 from Thermotoga maritima
Descriptor: RNA polymerase sigma factor rpoD
Authors:Lambert, L.J, Wei, Y, Schirf, V, Demeler, B, Werner, M.H.
Deposit date:2004-06-23
Release date:2004-11-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:T4 AsiA blocks DNA recognition by remodeling sigma(70) region 4
Embo J., 23, 2004
6C0Y
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BU of 6c0y by Molmil
Lysinoalanine synthase, DurN, from duramycin biosynthesis bound to duramycin
Descriptor: CYS-LYS-GLN-DAL-CYS-ALA-PHE-GLY-PRO-PHE-DBB-PHE-VAL-CYS-BH2-GLY-ASN-DBB-LYS, Lysinoalanine synthase, POTASSIUM ION
Authors:Cogan, D.P, Nair, S.K.
Deposit date:2018-01-03
Release date:2018-09-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Substrate-assisted enzymatic formation of lysinoalanine in duramycin.
Nat. Chem. Biol., 14, 2018
1DD4
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BU of 1dd4 by Molmil
Crystal structure of ribosomal protein l12 from thermotoga maritim
Descriptor: 50S RIBOSOMAL PROTEIN L7/L12, HEXATANTALUM DODECABROMIDE
Authors:Wahl, M.C, Bourenkov, G.P, Bartunik, H.D, Huber, R.
Deposit date:1999-11-08
Release date:2000-11-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Flexibility, conformational diversity and two dimerization modes in complexes of ribosomal protein L12.
Embo J., 19, 2000
1DD3
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BU of 1dd3 by Molmil
CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L12 FROM THERMOTOGA MARITIMA
Descriptor: 50S RIBOSOMAL PROTEIN L7/L12
Authors:Wahl, M.C, Bourenkov, G.P, Bartunik, H.D, Huber, R.
Deposit date:1999-11-08
Release date:2000-11-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Flexibility, conformational diversity and two dimerization modes in complexes of ribosomal protein L12.
EMBO J., 19, 2000
5M6J
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BU of 5m6j by Molmil
Crystal structure of nitrophorin 7 E27V mutant from Rhodnius prolixus
Descriptor: Nitrophorin-7, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ogata, H.
Deposit date:2016-10-25
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Electrostatic Tuning of the Ligand Binding Mechanism by Glu27 in Nitrophorin 7.
Sci Rep, 8, 2018
5M6K
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BU of 5m6k by Molmil
Crystal structure of nitrophorin 7 E27V mutant from Rhodnius prolixus with imidazole
Descriptor: IMIDAZOLE, Nitrophorin-7, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ogata, H.
Deposit date:2016-10-25
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Electrostatic Tuning of the Ligand Binding Mechanism by Glu27 in Nitrophorin 7.
Sci Rep, 8, 2018
5M8B
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BU of 5m8b by Molmil
Crystal structure of alpha-L-arabinofuranosidase from Lactobacillus brevis
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-xylosidase, MAGNESIUM ION, ...
Authors:Logan, D.T, Nordberg Karlsson, E, Linares-Pasten, J.A.
Deposit date:2016-10-28
Release date:2017-05-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of alpha-L-arabinofuranosidase from Lactobacillus brevis
To Be Published
7NL2
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BU of 7nl2 by Molmil
Structure of Xyn11 from Pseudothermotoga thermarum
Descriptor: 1-methylethyl 1-thio-beta-D-galactopyranoside, Beta-xylanase, GLYCEROL
Authors:Jimenez-Ortega, E, Sanz-Aparicio, J.
Deposit date:2021-02-22
Release date:2021-06-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Phylogenetic, functional and structural characterization of a GH10 xylanase active at extreme conditions of temperature and alkalinity
Comput Struct Biotechnol J, 19, 2021
7A99
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BU of 7a99 by Molmil
Crystal structure of the Phe57Trp mutant of the arginine-bound form of domain 1 from TmArgBP
Descriptor: ACETATE ION, ARGININE, Amino acid ABC transporter, ...
Authors:Balasco, N, Vitagliano, L, Smaldone, G, Ruggiero, A.
Deposit date:2020-09-01
Release date:2020-11-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Development of a Protein Scaffold for Arginine Sensing Generated through the Dissection of the Arginine-Binding Protein from Thermotoga maritima .
Int J Mol Sci, 21, 2020
8BN3
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BU of 8bn3 by Molmil
Yeast 80S, ES7s delta, eIF5A, Stm1 containing
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ...
Authors:Dimitrova-Paternoga, L, Paternoga, H, Wilson, D.N.
Deposit date:2022-11-12
Release date:2024-01-10
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Evolving precision: rRNA expansion segment 7S modulates translation velocity and accuracy in eukaryal ribosomes.
Nucleic Acids Res., 52, 2024
1A0E
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BU of 1a0e by Molmil
XYLOSE ISOMERASE FROM THERMOTOGA NEAPOLITANA
Descriptor: COBALT (II) ION, XYLOSE ISOMERASE
Authors:Gallay, O, Chopra, R, Conti, E, Brick, P, Blow, D.
Deposit date:1997-11-28
Release date:1998-06-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structures of Class II Xylose Isomerases from Two Thermophiles and a Hyperthermophile
To be Published
1E69
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BU of 1e69 by Molmil
SMC head domain from Thermotoga maritima
Descriptor: CHROMOSOME SEGREGATION SMC PROTEIN
Authors:Lowe, J, Cordell, S.C, van den Ent, F.
Deposit date:2000-08-09
Release date:2000-08-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structure of the Smc Head Domain: An Abc ATPase with 900 Residues Antiparallel Coiled-Coil Inserted
J.Mol.Biol., 306, 2001
8S1P
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BU of 8s1p by Molmil
YlmH bound to PtRNA-50S
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Paternoga, H, Dimitrova-Paternoga, L, Wilson, D.N.
Deposit date:2024-02-15
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (1.96 Å)
Cite:A role for the S4-domain containing protein YlmH in ribosome-associated quality control in Bacillus subtilis.
Nucleic Acids Res., 2024
8S1U
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BU of 8s1u by Molmil
YlmH bound to stalled 50S subunits with RqcH and PtRNA
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Paternoga, H, Wilson, D.N.
Deposit date:2024-02-16
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:A role for the S4-domain containing protein YlmH in ribosome-associated quality control in Bacillus subtilis.
Nucleic Acids Res., 2024
8TJF
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BU of 8tjf by Molmil
monovalent bispecific IgG antibodies through novel electrostatic steering mutations at the CH1-CL interface
Descriptor: Fab Lambda light chain, IgG1 Fab heavy chain
Authors:Oganesyan, V.Y, van Dyk, N, Mazor, Y, Chiang, C.
Deposit date:2023-07-21
Release date:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Robust production of monovalent bispecific IgG antibodies through novel electrostatic steering mutations at the C H 1-C lambda interface.
Mabs, 15, 2023
8TI4
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BU of 8ti4 by Molmil
monovalent bispecific IgG antibodies through novel electrostatic steering mutations at the CH1-CL interface
Descriptor: GLYCEROL, IgG1 Fab heavy chain, mutated to promote correct pairing, ...
Authors:Oganesyan, V.Y, van Dyk, N, Mazor, Y.
Deposit date:2023-07-19
Release date:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Robust production of monovalent bispecific IgG antibodies through novel electrostatic steering mutations at the C H 1-C lambda interface.
Mabs, 15, 2023
5LGF
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BU of 5lgf by Molmil
Solution structure of the N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase
Descriptor: Telomerase reverse transcriptase
Authors:Polshakov, V.I, Mantsyzov, A.B, Efimov, S.V.
Deposit date:2016-07-07
Release date:2017-07-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and function of the N-terminal domain of the yeast telomerase reverse transcriptase.
Nucleic Acids Res., 46, 2018
1EUE
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BU of 1eue by Molmil
RAT OUTER MITOCHONDRIAL MEMBRANE CYTOCHROME B5
Descriptor: CYTOCHROME B5, PROTOPORPHYRIN IX CONTAINING FE
Authors:Oganesyan, V, Zhang, X.
Deposit date:2000-04-19
Release date:2001-04-04
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Modulation of redox potential in electron transfer proteins: effects of complex formation on the active site microenvironment of cytochrome b5.
FARADAY DISC.CHEM.SOC, 116, 2001
7F4C
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BU of 7f4c by Molmil
The crystal structure of the immature holo-enzyme of homoserine dehydrogenase complexed with NADP and 1,4-butandiol from the hyperthermophilic archaeon Sulfurisphaera tokodaii.
Descriptor: 1,4-BUTANEDIOL, Homoserine dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Ogata, K, Kaneko, R, Kubota, T, Watanabe, K, Kurihara, E, Oshima, T, Yoshimune, K, Goto, M.
Deposit date:2021-06-18
Release date:2022-06-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase.
Commun Biol, 5, 2022
7UHY
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BU of 7uhy by Molmil
Human GATOR2 complex
Descriptor: GATOR complex protein MIOS, GATOR complex protein WDR24, GATOR complex protein WDR59, ...
Authors:Rogala, K.B, Valenstein, M.L, Lalgudi, P.V.
Deposit date:2022-03-27
Release date:2022-07-20
Last modified:2022-08-03
Method:ELECTRON MICROSCOPY (3.66 Å)
Cite:Structure of the nutrient-sensing hub GATOR2.
Nature, 607, 2022
2J7C
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BU of 2j7c by Molmil
Beta-glucosidase from Thermotoga maritima in complex with phenylaminomethyl-derived glucoimidazole
Descriptor: (5R,6R,7S,8S)-3-(ANILINOMETHYL)-5,6,7,8-TETRAHYDRO-5-(HYDROXYMETHYL)-IMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL, ACETATE ION, BETA-GLUCOSIDASE A, ...
Authors:Gloster, T.M, Zechel, D, Vasella, A, Davies, G.J.
Deposit date:2006-10-06
Release date:2006-10-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics.
J.Am.Chem.Soc., 129, 2007
2J7F
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BU of 2j7f by Molmil
Beta-glucosidase from Thermotoga maritima in complex with carboxylate- substituted glucoimidazole
Descriptor: ACETATE ION, BETA-GLUCOSIDASE A, CALCIUM ION, ...
Authors:Gloster, T.M, Zechel, D, Vasella, A, Davies, G.J.
Deposit date:2006-10-07
Release date:2006-10-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics.
J.Am.Chem.Soc., 129, 2007
2J7D
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BU of 2j7d by Molmil
Beta-glucosidase from Thermotoga maritima in complex with methoxycarbonyl-substituted glucoimidazole
Descriptor: ACETATE ION, BETA-GLUCOSIDASE A, CALCIUM ION, ...
Authors:Gloster, T.M, Zechel, D, Vasella, A, Davies, G.J.
Deposit date:2006-10-06
Release date:2006-10-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics.
J.Am.Chem.Soc., 129, 2007
2J7G
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BU of 2j7g by Molmil
Beta-glucosidase from Thermotoga maritima in complex with methyl acetic acid-substituted glucoimidazole
Descriptor: ACETATE ION, BETA-GLUCOSIDASE A, CALCIUM ION, ...
Authors:Gloster, T.M, Zechel, D, Vasella, A, Davies, G.J.
Deposit date:2006-10-07
Release date:2006-10-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics.
J.Am.Chem.Soc., 129, 2007
7PU4
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BU of 7pu4 by Molmil
Crystal structure of the dimer RBP-N and RBP-Trunc from Thermotoga maritima Ribose Binding Protein
Descriptor: Ribose ABC transporter, periplasmic ribose-binding protein
Authors:Romero-Romero, S, Michel, F, Hocker, B.
Deposit date:2021-09-28
Release date:2023-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Retracing the evolution of a modern periplasmic binding protein.
Protein Sci., 2023

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