Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5XTZ
DownloadVisualize
BU of 5xtz by Molmil
Crystal structure of GAS41 YEATS bound to H3K27ac peptide
Descriptor: ACETATE ION, THR-LYS-ALA-ALA-ARG-ALY-SER-ALA-PRO-ALA, YEATS domain-containing protein 4
Authors:Li, H.T, Zhao, D.
Deposit date:2017-06-21
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.105 Å)
Cite:Gas41 links histone acetylation to H2A.Z deposition and maintenance of embryonic stem cell identity.
Cell Discov, 4, 2018
2GOF
DownloadVisualize
BU of 2gof by Molmil
Three-dimensional structure of the trans-membrane domain of Vpu from HIV-1 in aligned phospholipid bicelles
Descriptor: VPU protein
Authors:Park, S.H, De Angelis, A.A, Nevzorov, A.A, Wu, C.H, Opella, S.J.
Deposit date:2006-04-12
Release date:2006-08-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Three-Dimensional Structure of the Transmembrane Domain of Vpu from HIV-1 in Aligned Phospholipid Bicelles.
Biophys.J., 91, 2006
5AJZ
DownloadVisualize
BU of 5ajz by Molmil
Human PFKFB3 in complex with an indole inhibitor 5
Descriptor: 2-azanyl-N-[4-[(3-cyano-1H-indol-5-yl)oxy]phenyl]ethanamide, 6-O-phosphono-beta-D-fructofuranose, 6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE 3, ...
Authors:Boyd, S, Brookfield, J.L, Critchlow, S.E, Cumming, I.A, Curtis, N.J, Debreczeni, J.E, Degorce, S.L, Donald, C, Evans, N.J, Groombridge, S, Hopcroft, P, Jones, N.P, Kettle, J.G, Lamont, S, Lewis, H.J, MacFaull, P, McLoughlin, S.B, Rigoreau, L.J.M, Smith, J.M, St-Gallay, S, Stock, J.K, Wheatley, E.R, Winter, J, Wingfield, J.
Deposit date:2015-02-27
Release date:2015-04-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure-Based Design of Potent and Selective Inhibitors of the Metabolic Kinase Pfkfb3.
J.Med.Chem., 58, 2015
5AK0
DownloadVisualize
BU of 5ak0 by Molmil
Human PFKFB3 in complex with an indole inhibitor 6
Descriptor: (2S)-N-[4-[1-METHYL-3-(1-METHYLPYRAZOL-4-YL)INDOL-5-YL]OXYPHENYL]PYRROLIDINE-2-CARBOXAMIDE, 6-O-phosphono-beta-D-fructofuranose, 6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE 3, ...
Authors:Boyd, S, Brookfield, J.L, Critchlow, S.E, Cumming, I.A, Curtis, N.J, Debreczeni, J.E, Degorce, S.L, Donald, C, Evans, N.J, Groombridge, S, Hopcroft, P, Jones, N.P, Kettle, J.G, Lamont, S, Lewis, H.J, MacFaull, P, McLoughlin, S.B, Rigoreau, L.J.M, Smith, J.M, St-Gallay, S, Stock, J.K, Wheatley, E.R, Winter, J, Wingfield, J.
Deposit date:2015-02-27
Release date:2015-04-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structure-Based Design of Potent and Selective Inhibitors of the Metabolic Kinase Pfkfb3.
J.Med.Chem., 58, 2015
4HFZ
DownloadVisualize
BU of 4hfz by Molmil
Crystal Structure of an MDM2/P53 Peptide Complex
Descriptor: Cellular tumor antigen p53, E3 ubiquitin-protein ligase Mdm2, SULFATE ION
Authors:Anil, B, Riedinger, C, Endicott, J.A, Noble, M.E.M.
Deposit date:2012-10-05
Release date:2013-07-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.694 Å)
Cite:The structure of an MDM2-Nutlin-3a complex solved by the use of a validated MDM2 surface-entropy reduction mutant.
Acta Crystallogr.,Sect.D, 69, 2013
3GU5
DownloadVisualize
BU of 3gu5 by Molmil
Crystal structure of DAPKQ23V-AMPPNP-Mg2+
Descriptor: Death-associated protein kinase 1, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:McNamara, L.K, Schavocky, J.S, Watterson, D.M, Brunzelle, J.S.
Deposit date:2009-03-28
Release date:2010-03-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Enzyme activity and crystallographic analyses of a glycine-rich loop mutant of DAPK
To be Published
2I3W
DownloadVisualize
BU of 2i3w by Molmil
Measurement of conformational changes accompanying desensitization in an ionotropic glutamate receptor: Structure of S729C mutant
Descriptor: GLUTAMATE RECEPTOR SUBUNIT 2, GLUTAMIC ACID
Authors:Armstrong, N, Jasti, J, Beich-Frandsen, M, Gouaux, E.
Deposit date:2006-08-21
Release date:2006-10-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Measurement of Conformational Changes accompanying Desensitization in an Ionotropic Glutamate Receptor.
Cell(Cambridge,Mass.), 127, 2006
1GQY
DownloadVisualize
BU of 1gqy by Molmil
MURC - CRYSTAL STRUCTURE OF THE ENZYME FROM HAEMOPHILUS INFLUENZAE COMPLEXED WITH AMPPCP
Descriptor: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE
Authors:Skarzynski, T, Cleasby, A, Domenici, E, Gevi, M, Shaw, J.
Deposit date:2001-12-06
Release date:2003-06-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structures of Udp-N-Acetylmuramate-L-Alanine Ligase (Murc) from Haemophilus Influenzae
To be Published
1DRA
DownloadVisualize
BU of 1dra by Molmil
CRYSTAL STRUCTURE OF UNLIGANDED ESCHERICHIA COLI DIHYDROFOLATE REDUCTASE. LIGAND-INDUCED CONFORMATIONAL CHANGES AND COOPERATIVITY IN BINDING
Descriptor: CALCIUM ION, CHLORIDE ION, DIHYDROFOLATE REDUCTASE, ...
Authors:Oatley, S.J, Kraut, J.
Deposit date:1991-11-06
Release date:1994-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of unliganded Escherichia coli dihydrofolate reductase. Ligand-induced conformational changes and cooperativity in binding.
Biochemistry, 30, 1991
1DR6
DownloadVisualize
BU of 1dr6 by Molmil
CRYSTAL STRUCTURES OF ORGANOMERCURIAL-ACTIVATED CHICKEN LIVER DIHYDROFOLATE REDUCTASE COMPLEXES
Descriptor: 7,8-DIHYDROBIOPTERIN, CALCIUM ION, DIHYDROFOLATE REDUCTASE, ...
Authors:Mctigue, M.A, Davies /II, J.F, Kaufman, B.T, Xuong, N.-H, Kraut, J.
Deposit date:1992-03-14
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structures of Organomercurial-Activated Chicken Liver Dihydrofolate Reductase Complexes
To be Published
1GR2
DownloadVisualize
BU of 1gr2 by Molmil
STRUCTURE OF A GLUTAMATE RECEPTOR LIGAND BINDING CORE (GLUR2) COMPLEXED WITH KAINATE
Descriptor: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, PROTEIN (GLUTAMATE RECEPTOR 2)
Authors:Armstrong, N, Sun, Y, Chen, G.Q, Gouaux, E.
Deposit date:1998-09-17
Release date:1998-12-09
Last modified:2017-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a glutamate-receptor ligand-binding core in complex with kainate.
Nature, 395, 1998
1GZ2
DownloadVisualize
BU of 1gz2 by Molmil
Crystal structure of the Ovocleidin-17 a major protein of the Gallus gallus eggshell calcified layer.
Descriptor: OVOCLEIDIN-17
Authors:Reyes-Grajeda, J.P, Moreno, A, Romero, A.
Deposit date:2002-05-13
Release date:2003-05-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystallization and Preliminary X-Ray Analysis of Ovocleidin-17 a Major Protein of the Gallus Gallus Eggshell Calcified Layer
Protein Pept.Lett., 9, 2002
2JOQ
DownloadVisualize
BU of 2joq by Molmil
Solution Structure of Protein HP0495 from H. pylori; Northeast structural genomics consortium target PT2; Ontario Centre for Structural Proteomics target HP0488
Descriptor: Hypothetical protein HP_0495
Authors:Gutmanas, A, Lemak, A, Yee, A, Karra, M, Srisailam, S, Semesi, A, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG), Ontario Centre for Structural Proteomics (OCSP)
Deposit date:2007-03-19
Release date:2007-04-03
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution Structure of Protein HP0495 from H. pylori
To be Published
2E21
DownloadVisualize
BU of 2e21 by Molmil
Crystal structure of TilS in a complex with AMPPNP from Aquifex aeolicus.
Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, tRNA(Ile)-lysidine synthase
Authors:Kuratani, M, Yoshikawa, Y, Sekine, S, Ishii, T, Shibata, R, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-11-06
Release date:2007-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of the initial binding of tRNA(Ile) lysidine synthetase TilS with ATP and L-lysine
To be Published
7BAN
DownloadVisualize
BU of 7ban by Molmil
human Teneurin4 Mut C2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Meijer, D.H, Janssen, B.J.C.
Deposit date:2020-12-16
Release date:2022-01-12
Last modified:2022-05-11
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Teneurin4 dimer structures reveal a calcium-stabilized compact conformation supporting homomeric trans-interactions.
Embo J., 41, 2022
7Y7P
DownloadVisualize
BU of 7y7p by Molmil
QDE-1 in complex with RNA template, RNA primer and AMPNPP
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Cui, R.X, Gan, J.H, Ma, J.B.
Deposit date:2022-06-22
Release date:2022-09-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1.
Nucleic Acids Res., 50, 2022
7Y7S
DownloadVisualize
BU of 7y7s by Molmil
QDE-1 in complex with DNA template, RNA primer and AMPNPP
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Cui, R.X, Gan, J.H, Ma, J.B.
Deposit date:2022-06-22
Release date:2022-09-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1.
Nucleic Acids Res., 50, 2022
5AUJ
DownloadVisualize
BU of 5auj by Molmil
Pyrococcus furiosus proliferating cell nuclear antigen (PCNA) SeMet derivative
Descriptor: DNA polymerase sliding clamp
Authors:Watanabe, Y, Oyama, T.
Deposit date:2015-04-21
Release date:2016-04-27
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Pyrococcus furiosus proliferating cell nuclear antigen (PCNA) SeMet derivative
To Be Published
7RL1
DownloadVisualize
BU of 7rl1 by Molmil
AAVrh.10-7x capsid
Descriptor: Capsid protein VP1, DNA (5'-D(*CP*A)-3')
Authors:Mietzsch, M, McKenna, R.
Deposit date:2021-07-23
Release date:2021-09-08
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:Structural Study of Aavrh.10 Receptor and Antibody Interactions.
J.Virol., 95, 2021
5FJ8
DownloadVisualize
BU of 5fj8 by Molmil
Cryo-EM structure of yeast RNA polymerase III elongation complex at 3. 9 A
Descriptor: DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC10, DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC2, ...
Authors:Hoffmann, N.A, Jakobi, A.J, Moreno-Morcillo, M, Glatt, S, Kosinski, J, Hagen, W.J, Sachse, C, Muller, C.W.
Deposit date:2015-10-06
Release date:2015-11-25
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Molecular Structures of Unbound and Transcribing RNA Polymerase III.
Nature, 528, 2015
3TWI
DownloadVisualize
BU of 3twi by Molmil
Variable Lymphocyte Receptor Recognition of the Immunodominant Glycoprotein of Bacillus anthracis Spores
Descriptor: BclA protein, GLYCEROL, Variable lymphocyte receptor B
Authors:Kirchdoerfer, R.N, Herrin, B.R, Han, B.W, Turnbough Jr, C.L, Cooper, M.D, Wilson, I.A.
Deposit date:2011-09-21
Release date:2012-03-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Variable Lymphocyte Receptor Recognition of the Immunodominant Glycoprotein of Bacillus anthracis Spores.
Structure, 20, 2012
7R5M
DownloadVisualize
BU of 7r5m by Molmil
Core-binding domain of fungal E3-binding domain bound to the pyruvate dehydrogenase E2 core
Descriptor: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial, Pyruvate dehydrogenase X component
Authors:Forsberg, B.O.
Deposit date:2022-02-11
Release date:2023-01-18
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The structure and evolutionary diversity of the fungal E3-binding protein.
Commun Biol, 6, 2023
7S1W
DownloadVisualize
BU of 7s1w by Molmil
The AAVrh.10-glycan complex
Descriptor: Capsid protein VP1, beta-D-galactopyranose
Authors:Mietzsch, M, McKenna, R.
Deposit date:2021-09-02
Release date:2021-09-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structural Study of Aavrh.10 Receptor and Antibody Interactions.
J.Virol., 95, 2021
5CJ2
DownloadVisualize
BU of 5cj2 by Molmil
Ran GDP Y39A mutant triclinic crystal form
Descriptor: GTP-binding nuclear protein Ran, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Vetter, I.R, Brucker, S.
Deposit date:2015-07-13
Release date:2015-09-09
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Catalysis of GTP Hydrolysis by Small GTPases at Atomic Detail by Integration of X-ray Crystallography, Experimental, and Theoretical IR Spectroscopy.
J.Biol.Chem., 290, 2015
8RQB
DownloadVisualize
BU of 8rqb by Molmil
Cryo-EM structure of mouse heavy-chain apoferritin
Descriptor: FE (III) ION, Ferritin heavy chain, N-terminally processed, ...
Authors:Nazarov, S, Myasnikov, A, Stahlberg, H.
Deposit date:2024-01-17
Release date:2024-03-13
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (1.09 Å)
Cite:Low-dose cryo-electron ptychography of proteins at sub-nanometer resolution.
Nat Commun, 15, 2024

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon