Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2YYX
DownloadVisualize
BU of 2yyx by Molmil
The Y65A mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
Descriptor: Cytochrome c3, PROTOPORPHYRIN IX CONTAINING FE
Authors:Higuchi, Y, Komori, H.
Deposit date:2007-05-02
Release date:2008-05-06
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structures of Noncoordinated Aromatic Residue Mutants in Tetraheme Cytochrome c3 from Desulfovibrio vulgaris Miyazaki F
To be Published
2IDT
DownloadVisualize
BU of 2idt by Molmil
Structure of M98Q mutant of amicyanin, Cu(II)
Descriptor: Amicyanin, COPPER (II) ION
Authors:Carrell, C.J, Ma, J.K, Antholine, W, Hosler, J.P, Mathews, F.S, Davidson, V.L.
Deposit date:2006-09-15
Release date:2007-03-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1 Å)
Cite:Generation of Novel Copper Sites by Mutation of the Axial Ligand of Amicyanin. Atomic Resolution Structures and Spectroscopic Properties
Biochemistry, 46, 2007
2P5K
DownloadVisualize
BU of 2p5k by Molmil
Crystal structure of the N-terminal domain of AhrC
Descriptor: Arginine repressor
Authors:Garnett, J.A, Baumberg, S, Stockley, P.G, Phillips, S.E.V.
Deposit date:2007-03-15
Release date:2007-10-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1 Å)
Cite:A high-resolution structure of the DNA-binding domain of AhrC, the arginine repressor/activator protein from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 63, 2007
2X46
DownloadVisualize
BU of 2x46 by Molmil
Crystal Structure of SeMet Arg r 1
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ALLERGEN ARG R 1
Authors:Paesen, G.C, Siebold, C, Syme, N, Harlos, K, Graham, S.C, Hilger, C, Homans, S.W, Hentges, F, Stuart, D.I.
Deposit date:2010-01-28
Release date:2011-02-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1 Å)
Cite:Crystal Structure of the Allergen Arg R 1, a Histamine-Binding Lipocalin from a Soft Tick
To be Published
8C10
DownloadVisualize
BU of 8c10 by Molmil
Biochemical and structural characterisation of an alkaline family GH5 cellulase from a shipworm symbiont
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GH5 Cellulase, ...
Authors:Leiros, I, Vaaje-Kolstad, G.
Deposit date:2022-12-19
Release date:2023-04-19
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1 Å)
Cite:Biochemical and structural characterisation of a family GH5 cellulase from endosymbiont of shipworm P. megotara.
Biotechnol Biofuels Bioprod, 16, 2023
1GKM
DownloadVisualize
BU of 1gkm by Molmil
HISTIDINE AMMONIA-LYASE (HAL) FROM PSEUDOMONAS PUTIDA INHIBITED WITH L-CYSTEINE
Descriptor: CYSTEINE, GLYCEROL, Histidine ammonia-lyase, ...
Authors:Baedeker, M, Schulz, G.E.
Deposit date:2001-08-16
Release date:2002-04-05
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structures of Two Histidine Ammonia-Lyase Modifications and Implications for the Catalytic Mechanism
Eur.J.Biochem., 269, 2002
1T2H
DownloadVisualize
BU of 1t2h by Molmil
Y81W mutant of RNase Sa from Streptomyces aureofaciens
Descriptor: Guanyl-specific ribonuclease Sa, SULFATE ION
Authors:Sevcik, J, Urbanikova, L.
Deposit date:2004-04-21
Release date:2004-12-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1 Å)
Cite:Contribution of single tryptophan residues to the fluorescence and stability of ribonuclease sa.
Biophys.J., 87, 2004
4LN2
DownloadVisualize
BU of 4ln2 by Molmil
The second SH3 domain from CAP/Ponsin in complex with proline rich peptide from Vinculin
Descriptor: Sorbin and SH3 domain-containing protein 1, proline rich peptide
Authors:Zhao, D, Li, F, Wu, J, Shi, Y, Zhang, Z, Gong, Q.
Deposit date:2013-07-11
Release date:2014-05-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural investigation of the interaction between the tandem SH3 domains of c-Cbl-associated protein and vinculin
J.Struct.Biol., 187, 2014
2CE2
DownloadVisualize
BU of 2ce2 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF A FLUORESCENT FORM OF H-RAS P21 IN COMPLEX WITH GDP
Descriptor: GTPASE HRAS, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Klink, B.U, Goody, R.S, Scheidig, A.J.
Deposit date:2006-02-02
Release date:2006-08-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1 Å)
Cite:A Newly Designed Microspectrofluorometer for Kinetic Studies on Protein Crystals in Combination with X-Ray Diffraction
Biophys.J., 91, 2006
8B8F
DownloadVisualize
BU of 8b8f by Molmil
Atomic structure of the beta-trefoil domain of the Laccaria bicolor lectin LBL in complex with lactose
Descriptor: N-terminal beta-trefoil domain of the lectin LBL from Laccaria bicolor, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Acebron, I, Campanero-Rhodes, M.A, Solis, D, Menendez, M, Garcia, C, Lillo, M.P, Mancheno, J.M.
Deposit date:2022-10-04
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1 Å)
Cite:Atomic crystal structure and sugar specificity of a beta-trefoil lectin domain from the ectomycorrhizal basidiomycete Laccaria bicolor.
Int.J.Biol.Macromol., 233, 2023
1Y55
DownloadVisualize
BU of 1y55 by Molmil
Crystal structure of the C122S mutant of E. Coli expressed avidin related protein 4 (AVR4)-biotin complex
Descriptor: Avidin-related protein 4/5, BIOTIN, FORMIC ACID
Authors:Eisenberg-Domovich, Y, Hytonen, V.P, Wilchek, M, Bayer, E.A, Kulomaa, M.S, Livnah, O.
Deposit date:2004-12-02
Release date:2005-05-24
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1 Å)
Cite:High-resolution crystal structure of an avidin-related protein: insight into high-affinity biotin binding and protein stability.
Acta Crystallogr.,Sect.D, 61, 2005
4GNR
DownloadVisualize
BU of 4gnr by Molmil
1.0 Angstrom resolution crystal structure of the branched-chain amino acid transporter substrate binding protein LivJ from Streptococcus pneumoniae str. Canada MDR_19A in complex with Isoleucine
Descriptor: ABC transporter substrate-binding protein-branched chain amino acid transport, CHLORIDE ION, ISOLEUCINE, ...
Authors:Halavaty, A.S, Kudritska, M, Wawrzak, Z, Stogios, P.J, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-08-17
Release date:2012-09-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1 Å)
Cite:1.0 Angstrom resolution crystal structure of the branched-chain amino acid transporter substrate binding protein LivJ from Streptococcus pneumoniae str. Canada MDR_19A in complex with Isoleucine
To be Published
6Q49
DownloadVisualize
BU of 6q49 by Molmil
CDK2 in complex with FragLite6
Descriptor: 4-bromanyl-1~{H}-pyridin-2-one, Cyclin-dependent kinase 2, DIMETHYL SULFOXIDE
Authors:Wood, D.J, Martin, M.P, Noble, M.E.M.
Deposit date:2018-12-05
Release date:2019-03-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1 Å)
Cite:FragLites-Minimal, Halogenated Fragments Displaying Pharmacophore Doublets. An Efficient Approach to Druggability Assessment and Hit Generation.
J.Med.Chem., 62, 2019
1A6M
DownloadVisualize
BU of 1a6m by Molmil
OXY-MYOGLOBIN, ATOMIC RESOLUTION
Descriptor: MYOGLOBIN, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Vojtechovsky, J, Chu, K, Berendzen, J, Sweet, R.M, Schlichting, I.
Deposit date:1998-02-26
Release date:1999-04-06
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1 Å)
Cite:Crystal structures of myoglobin-ligand complexes at near-atomic resolution.
Biophys.J., 77, 1999
8DA5
DownloadVisualize
BU of 8da5 by Molmil
Coevolved affibody-Z domain pair LL1.c4
Descriptor: GLYCEROL, Immunoglobulin G-binding protein A, affibody LL1.FIVM
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
6NFR
DownloadVisualize
BU of 6nfr by Molmil
CopC from Pseudomonas fluorescens
Descriptor: CopC, SULFATE ION
Authors:Maher, M.J.
Deposit date:2018-12-20
Release date:2019-04-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1 Å)
Cite:The crystal structure of the CopC protein from Pseudomonas fluorescens reveals amended classifications for the CopC protein family.
J. Inorg. Biochem., 195, 2019
8JFS
DownloadVisualize
BU of 8jfs by Molmil
Phosphate bound acylphosphatase from Deinococcus radiodurans at 1 Angstrom resolution
Descriptor: 1,2-ETHANEDIOL, Acylphosphatase, CITRIC ACID, ...
Authors:Khakerwala, Z, Kumar, A, Makde, R.D.
Deposit date:2023-05-18
Release date:2023-06-14
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1 Å)
Cite:Crystal structure of phosphate bound Acyl phosphatase mini-enzyme from Deinococcus radiodurans at 1 angstrom resolution.
Biochem.Biophys.Res.Commun., 671, 2023
1C7K
DownloadVisualize
BU of 1c7k by Molmil
CRYSTAL STRUCTURE OF THE ZINC PROTEASE
Descriptor: CALCIUM ION, ZINC ENDOPROTEASE, ZINC ION
Authors:Kurisu, G, Harada, S, Kai, Y.
Deposit date:2000-02-19
Release date:2001-04-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structure of the zinc-binding site in the crystal structure of a zinc endoprotease from Streptomyces caespitosus at 1 A resolution.
J.Inorg.Biochem., 82, 2000
5JIG
DownloadVisualize
BU of 5jig by Molmil
Crytsal structure of Wss1 from S. pombe
Descriptor: NICKEL (II) ION, OXYGEN MOLECULE, Ubiquitin and WLM domain-containing metalloprotease SPCC1442.07c
Authors:Groll, M, Stingele, J, Boulton, S.
Deposit date:2016-04-22
Release date:2016-11-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1 Å)
Cite:Mechanism and Regulation of DNA-Protein Crosslink Repair by the DNA-Dependent Metalloprotease SPRTN.
Mol.Cell, 64, 2016
2OFR
DownloadVisualize
BU of 2ofr by Molmil
1.00 A Crystal Structure Of V36A/D129A/L130A Mutant of Nitrophorin 4 From Rhodnius Prolixus Complexed With Nitric Oxide at pH 5.6
Descriptor: NITRIC OXIDE, Nitrophorin-4, PHOSPHATE ION, ...
Authors:Amoia, A.M.
Deposit date:2007-01-04
Release date:2008-01-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1 Å)
Cite:Ligand Protection and Nitric Oxide Interactions with Heme in Nitrophorin 4: Kinetic and Structural Analyses of a Loop Mutant
To be Published
3NE0
DownloadVisualize
BU of 3ne0 by Molmil
Structure and functional regulation of RipA, a mycobacterial enzyme essential for daughter cell separation
Descriptor: Resuscitation promoting factor Interacting Protein A
Authors:Ruggiero, A, Squeglia, F, Berisio, R.
Deposit date:2010-06-08
Release date:2010-09-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structure and Functional Regulation of RipA, a Mycobacterial Enzyme Essential for Daughter Cell Separation.
Structure, 18, 2010
6Q4H
DownloadVisualize
BU of 6q4h by Molmil
CDK2 in complex with FragLite36
Descriptor: 2-[3-[(2-azanyl-9~{H}-purin-6-yl)oxy]phenyl]ethanoic acid, Cyclin-dependent kinase 2, DIMETHYL SULFOXIDE
Authors:Wood, D.J, Martin, M.P, Noble, M.E.M.
Deposit date:2018-12-05
Release date:2019-03-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1 Å)
Cite:FragLites-Minimal, Halogenated Fragments Displaying Pharmacophore Doublets. An Efficient Approach to Druggability Assessment and Hit Generation.
J.Med.Chem., 62, 2019
7TMJ
DownloadVisualize
BU of 7tmj by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Descriptor: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, NITRATE ION, SILVER ION, ...
Authors:Nguyen, A.I.
Deposit date:2022-01-19
Release date:2022-04-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1 Å)
Cite:Assembly of pi-Stacking Helical Peptides into a Porous and Multivariable Proteomimetic Framework.
J.Am.Chem.Soc., 144, 2022
2V1M
DownloadVisualize
BU of 2v1m by Molmil
Crystal structure of Schistosoma mansoni glutathione peroxidase
Descriptor: ACETATE ION, GLUTATHIONE PEROXIDASE, LITHIUM ION, ...
Authors:Dimastrogiovanni, D, Miele, A.E, Angelucci, F, Boumis, G, Bellelli, A, Brunori, M.
Deposit date:2008-09-16
Release date:2009-09-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1 Å)
Cite:Combining Crystallography and Molecular Dynamics: The Case of Schistosoma Mansoni Phospholipid Glutathione Peroxidase.
Proteins, 78, 2010
1UZV
DownloadVisualize
BU of 1uzv by Molmil
High affinity fucose binding of Pseudomonas aeruginosa lectin II: 1.0 A crystal structure of the complex
Descriptor: CALCIUM ION, PSEUDOMONAS AERUGINOSA LECTIN II, SULFATE ION, ...
Authors:Mitchell, E, Sabin, C.D, Snajdrova, L, Budova, M, Perret, S, Gautier, C, Gilboa-Garber, N, Koca, J, Wimmerova, M, Imberty, A.
Deposit date:2004-03-17
Release date:2004-12-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1 Å)
Cite:High Affinity Fucose Binding of Pseudomonas Aeruginosa Lectin Pa-Iil: 1.0 A Resolution Crystal Structure of the Complex Combined with Thermodynamics and Computational Chemistry Approaches.
Proteins, 58, 2005

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon