PDB: 46984 resultsInfo pagesStatus searchChemie searchBIRD

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4JI5	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ... Authors: Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-03-05 Release date: 2013-11-06 Last modified: 2013-12-04 Method: X-RAY DIFFRACTION (3.85 Å) Cite: The central role of protein S12 in organizing the structure of the decoding site of the ribosome. Rna, 19, 2013
7SCY	Nuc147 bound to single BRCT Descriptor: DNA (147-MER), Histone H2A, Histone H2B type 1-J, ... Authors: Muthurajan, U.M, Rudolph, J.R. Deposit date: 2021-09-29 Release date: 2022-01-12 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: The BRCT domain of PARP1 binds intact DNA and mediates intrastrand transfer. Mol.Cell, 81, 2021
7SCZ	Nuc147 bound to multiple BRCTs Descriptor: DNA (147-MER), Histone H2A, Histone H2B type 1-J, ... Authors: Muthurajan, U.M, Rudolph, J. Deposit date: 2021-09-29 Release date: 2022-01-19 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: The BRCT domain of PARP1 binds intact DNA and mediates intrastrand transfer. Mol.Cell, 81, 2021
7AST	Apo Human RNA Polymerase III Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... Authors: Ramsay, E.P, Abascal-Palacios, G, Daiss, J.L, King, H, Gouge, J, Pilsl, M, Beuron, F, Morris, E, Gunkel, P, Engel, C, Vannini, A. Deposit date: 2020-10-28 Release date: 2020-12-23 Last modified: 2020-12-30 Method: ELECTRON MICROSCOPY (4 Å) Cite: Structure of human RNA polymerase III. Nat Commun, 11, 2020
4J8X	X-ray structure of NCP145 with bound chlorido(eta-6-p-cymene)(N-fluorophenyl-2-pyridinecarbothioamide)ruthenium(II) Descriptor: DNA, Histone H2A, Histone H2B 1.1, ... Authors: Adhireksan, Z, Davey, C.A. Deposit date: 2013-02-15 Release date: 2013-05-08 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.87 Å) Cite: Novel metal(II) arene 2-pyridinecarbothioamides: a rationale to orally active organometallic anticancer agents CHEM SCI, 4, 2013
4GQS	Structure of Human Microsomal Cytochrome P450 (CYP) 2C19 Descriptor: (4-hydroxy-3,5-dimethylphenyl)(2-methyl-1-benzofuran-3-yl)methanone, Cytochrome P450 2C19, GLYCEROL, ... Authors: Reynald, R.L, Sansen, S, Stout, C.D, Johnson, E.F. Deposit date: 2012-08-23 Release date: 2012-11-14 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.87 Å) Cite: Structural Characterization of Human Cytochrome P450 2C19: ACTIVE SITE DIFFERENCES BETWEEN P450s 2C8, 2C9, AND 2C19. J.Biol.Chem., 287, 2012
6LYZ	Real-space refinement of the structure of hen egg-white lysozyme Descriptor: HEN EGG WHITE LYSOZYME Authors: Diamond, R, Phillips, D.C, Blake, C.C.F, North, A.C.T. Deposit date: 1975-02-01 Release date: 1977-04-12 Last modified: 2017-11-29 Method: X-RAY DIFFRACTION (2 Å) Cite: Real-space refinement of the structure of hen egg-white lysozyme. J.Mol.Biol., 82, 1974
7AS9	Bacillus subtilis ribosome-associated quality control complex state A. Ribosomal 50S subunit with peptidyl tRNA in the A/P position and RqcH. Descriptor: 23S rRNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ... Authors: Crowe-McAuliffe, C, Wilson, D.N. Deposit date: 2020-10-27 Release date: 2020-12-23 Last modified: 2021-01-20 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Structural Basis for Bacterial Ribosome-Associated Quality Control by RqcH and RqcP. Mol.Cell, 81, 2021
6J51	RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the nucleosome, weak Elf1 (+1 position) Descriptor: DNA (198-MER), DNA (36-MER), DNA-directed RNA polymerase subunit, ... Authors: Ehara, H, Kujirai, T, Fujino, Y, Shirouzu, M, Kurumizaka, H, Sekine, S. Deposit date: 2019-01-10 Release date: 2019-02-20 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (4.2 Å) Cite: Structural insight into nucleosome transcription by RNA polymerase II with elongation factors. Science, 363, 2019
5WSG	Cryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolution Descriptor: 3'-exon-intron, 3'-intron-lariat, 5'-exon, ... Authors: Yan, C, Wan, R, Bai, R, Huang, G, Shi, Y. Deposit date: 2016-12-07 Release date: 2017-01-25 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (4 Å) Cite: Structure of a yeast step II catalytically activated spliceosome Science, 355, 2017
5WNR	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: DeMirci, H. Deposit date: 2017-08-01 Release date: 2018-02-21 Last modified: 2020-10-21 Method: X-RAY DIFFRACTION (3.5 Å) Cite: 2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation. Nat. Struct. Mol. Biol., 25, 2018
7D58	cryo-EM structure of human RNA polymerase III in elongating state Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... Authors: Wang, Q, Wan, F, Lan, P, Wu, J, Lei, M. Deposit date: 2020-09-25 Release date: 2021-02-17 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Structural insights into transcriptional regulation of human RNA polymerase III. Nat.Struct.Mol.Biol., 28, 2021
7D59	cryo-EM structure of human RNA polymerase III in apo state Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... Authors: Wang, Q, Wan, F, Lan, P, Wu, J, Lei, M. Deposit date: 2020-09-25 Release date: 2021-02-17 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structural insights into transcriptional regulation of human RNA polymerase III. Nat.Struct.Mol.Biol., 28, 2021
4LD9	Crystal structure of the N-terminally acetylated BAH domain of Sir3 bound to the nucleosome core particle Descriptor: Histone H2A, Histone H2B 1.1, Histone H3.2, ... Authors: Arnaudo, N, Fernandez, I.S, McLaughlin, S.H, Peak-Chew, S.Y, Rhodes, D, Martino, F. Deposit date: 2013-06-24 Release date: 2013-08-14 Last modified: 2013-09-18 Method: X-RAY DIFFRACTION (3.306 Å) Cite: The N-terminal acetylation of Sir3 stabilizes its binding to the nucleosome core particle. Nat.Struct.Mol.Biol., 20, 2013
4LF8	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, MAGNESIUM ION, PAROMOMYCIN, ... Authors: Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-06-26 Release date: 2014-07-02 Method: X-RAY DIFFRACTION (3.1484 Å) Cite: Crystal Structure of 30S ribosomal subunit from Thermus thermophilus to be published, 2013
4LF4	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDROXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, 16S rRNA, MAGNESIUM ION, ... Authors: Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-06-26 Release date: 2014-07-02 Method: X-RAY DIFFRACTION (3.3421 Å) Cite: Crystal Structure of 30S ribosomal subunit from Thermus thermophilus To be Published, 2013
4LF6	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, MAGNESIUM ION, NEOMYCIN, ... Authors: Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-06-26 Release date: 2014-07-02 Method: X-RAY DIFFRACTION (3.3052 Å) Cite: Crystal Structure of 30S ribosomal subunit from Thermus thermophilus To be Published, 2013
4LF5	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, HYGROMYCIN B, MAGNESIUM ION, ... Authors: Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-06-26 Release date: 2014-07-02 Method: X-RAY DIFFRACTION (3.753 Å) Cite: Crystal Structure of 30S ribosomal subunit from Thermus thermophilus To be Published, 2013
5WNQ	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: DeMirci, H. Deposit date: 2017-08-01 Release date: 2018-02-21 Last modified: 2020-10-21 Method: X-RAY DIFFRACTION (3.5 Å) Cite: 2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation. Nat. Struct. Mol. Biol., 25, 2018
4LFB	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, MAGNESIUM ION, NEOMYCIN, ... Authors: Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-06-26 Release date: 2014-07-02 Method: X-RAY DIFFRACTION (3.009 Å) Cite: Crystal Structure of 30S ribosomal subunit from Thermus thermophilus to be published, 2013
5UYS	Human steroidogenic cytochrome P450 17A1 with 3alphaOH-5alpha-abiraterone analog Descriptor: (3alpha,5alpha,8alpha)-17-(pyridin-3-yl)androst-16-en-3-ol, PROTOPORPHYRIN IX CONTAINING FE, Steroid 17-alpha-hydroxylase/17,20 lyase Authors: Scott, E.E, Petrunak, E.M. Deposit date: 2017-02-24 Release date: 2018-02-28 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.392 Å) Cite: Human cytochrome P450 17A1 structures with metabolites of prostate cancer drug abiraterone reveal substrate-binding plasticity and a second binding site. J.Biol.Chem., 299, 2023
4JI7	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ... Authors: Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-03-05 Release date: 2013-11-06 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (3.5 Å) Cite: The central role of protein S12 in organizing the structure of the decoding site of the ribosome. Rna, 19, 2013
4JIW	c1882 PAAR-repeat protein from Escherichia coli in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5 Descriptor: CHLORIDE ION, MAGNESIUM ION, Putative uncharacterized protein, ... Authors: Buth, S.A, Leiman, P.G, Shneider, M.M. Deposit date: 2013-03-07 Release date: 2013-08-14 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (3.402 Å) Cite: PAAR-repeat proteins sharpen and diversify the type VI secretion system spike. Nature, 500, 2013
4LFC	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, MAGNESIUM ION, POTASSIUM ION, ... Authors: Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-06-26 Release date: 2014-07-02 Method: X-RAY DIFFRACTION (3.602 Å) Cite: to be published, 2013
4KGC	Nucleosome Core Particle Containing (ETA6-P-CYMENE)-(1, 2-ETHYLENEDIAMINE)-RUTHENIUM Descriptor: (ethane-1,2-diamine-kappa~2~N,N')[(1,2,3,4,5,6-eta)-1-methyl-4-(propan-2-yl)cyclohexane-1,2,3,4,5,6-hexayl]ruthenium, DNA (145-mer), Histone H2A, ... Authors: Adhireksan, Z, Davey, C.A. Deposit date: 2013-04-29 Release date: 2014-03-26 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.69 Å) Cite: Ligand substitutions between ruthenium-cymene compounds can control protein versus DNA targeting and anticancer activity Nat Commun, 5, 2014

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