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3OQN
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BU of 3oqn by Molmil
Structure of ccpa-hpr-ser46-p-gntr-down cre
Descriptor: 5'-D(*AP*TP*GP*GP*TP*AP*CP*CP*GP*CP*TP*TP*TP*CP*AP*A)-3', 5'-D(*TP*TP*GP*AP*AP*AP*GP*CP*GP*GP*TP*AP*CP*CP*AP*T)-3', Catabolite control protein A, ...
Authors:Schumacher, M.A, Sprehe, M, Bartholomae, M, Hillen, W, Brennan, R.G.
Deposit date:2010-09-03
Release date:2010-12-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structures of carbon catabolite protein A-(HPr-Ser46-P) bound to diverse catabolite response element sites reveal the basis for high-affinity binding to degenerate DNA operators.
Nucleic Acids Res., 39, 2011
3OQO
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BU of 3oqo by Molmil
Ccpa-hpr-ser46p-syn cre
Descriptor: 5'-D(*CP*TP*GP*AP*AP*AP*GP*CP*GP*CP*TP*AP*AP*CP*AP*G)-3', 5'-D(*CP*TP*GP*TP*TP*AP*GP*CP*GP*CP*TP*TP*TP*CP*AP*G)-3', Catabolite control protein A, ...
Authors:schumacher, M.A, Sprehe, M, Bartholomae, M, Hillen, W, Brennan, R.G.
Deposit date:2010-09-03
Release date:2011-10-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Structures of carbon catabolite protein A-(HPr-Ser46-P) bound to diverse catabolite response element sites reveal the basis for high-affinity binding to degenerate DNA operators.
Nucleic Acids Res., 39, 2011
3N0H
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BU of 3n0h by Molmil
hDHFR double mutant Q35S/N64F Trimethoprim Binary Complex
Descriptor: Dihydrofolate reductase, SULFATE ION, TRIMETHOPRIM
Authors:Cody, V.
Deposit date:2010-05-14
Release date:2011-09-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystallographic analysis reveals a novel second binding site for trimethoprim in active site double mutants of human dihydrofolate reductase.
J.Struct.Biol., 176, 2011
7X76
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BU of 7x76 by Molmil
Cryo-EM structure of Streptomyces coelicolor RNAP-promoter open complex with two Zur dimers
Descriptor: DNA (84-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Yang, X, Zheng, J.
Deposit date:2022-03-09
Release date:2022-08-03
Last modified:2022-08-24
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
7X75
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BU of 7x75 by Molmil
Cryo-EM structure of Streptomyces coelicolor RNAP-promoter open complex with three Zur dimers
Descriptor: DNA (84-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Yang, X, Zheng, J.
Deposit date:2022-03-09
Release date:2022-08-03
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
7X74
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BU of 7x74 by Molmil
Cryo-EM structure of Streptomyces coelicolor transcription initial complex with two Zur dimers.
Descriptor: DNA (84-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Yang, X, Zheng, J.
Deposit date:2022-03-09
Release date:2022-08-03
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
7VO0
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BU of 7vo0 by Molmil
Streptomyces coelicolor zinc uptake regulator complexed with zinc and DNA (trimer of dimers)
Descriptor: DNA_NT (84-MER), DNA_T (84-MER), Putative metal uptake regulation protein, ...
Authors:Yang, X, Zheng, J.
Deposit date:2021-10-12
Release date:2022-08-03
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
7VPD
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BU of 7vpd by Molmil
Cryo-EM structure of Streptomyces coelicolor RNAP-promoter open complex with one Zur dimers
Descriptor: DNA (84-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Yang, X, Zheng, J.
Deposit date:2021-10-15
Release date:2022-08-03
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
7VPZ
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BU of 7vpz by Molmil
Cryo-EM structure of Streptomyces coelicolor transcription initial complex with one Zur dimer
Descriptor: DNA (84-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Yang, X, Zheng, J.
Deposit date:2021-10-18
Release date:2022-08-03
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4.14 Å)
Cite:Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
7VO9
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BU of 7vo9 by Molmil
Streptomyces coelicolor zinc uptake regulator complexed with zinc and DNA (dimer of dimers)
Descriptor: DNA (84-MER), Putative metal uptake regulation protein, ZINC ION
Authors:Yang, X, Zheng, J.
Deposit date:2021-10-13
Release date:2022-08-03
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
1FIP
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BU of 1fip by Molmil
THE STRUCTURE OF FIS MUTANT PRO61ALA ILLUSTRATES THAT THE KINK WITHIN THE LONG ALPHA-HELIX IS NOT DUE TO THE PRESENCE OF THE PROLINE RESIDUE
Descriptor: FACTOR FOR INVERSION STIMULATION (FIS), UNKNOWN PEPTIDE, POSSIBLY PART OF THE UNOBSERVED RESIDUES IN ENTITY 1
Authors:Yuan, H.S, Wang, S.S, Yang, W.-Z, Finkel, S.E, Johnson, R.C.
Deposit date:1994-09-26
Release date:1995-02-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structure of Fis mutant Pro61Ala illustrates that the kink within the long alpha-helix is not due to the presence of the proline residue.
J.Biol.Chem., 269, 1994
4YWC
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BU of 4ywc by Molmil
Crystal structure of Myc3(5-242) fragment in complex with Jaz9(218-239) peptide
Descriptor: Protein TIFY 7, Transcription factor MYC3
Authors:Ke, J, Zhang, F, Brunzelle, J.S, Xu, H.E, Melcher, K, He, S.Y.
Deposit date:2015-03-20
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of JAZ repression of MYC transcription factors in jasmonate signalling.
Nature, 525, 2015
5UND
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BU of 5und by Molmil
Crystal Structure of CTCF(ZnF 4-10) With 28-mer DNA
Descriptor: 1,2-ETHANEDIOL, DNA (26-MER), GLYCEROL, ...
Authors:Horton, J.R, Cheng, X.
Deposit date:2017-01-30
Release date:2017-05-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.549 Å)
Cite:Structural Basis for the Versatile and Methylation-Dependent Binding of CTCF to DNA.
Mol. Cell, 66, 2017
7NYQ
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BU of 7nyq by Molmil
Crystal structure of the Mei-P26 NHL domain
Descriptor: Meiotic P26, isoform C
Authors:Salerno-Kochan, A, Gaik, M, Medenbach, J, Glatt, S.
Deposit date:2021-03-23
Release date:2022-05-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular insights into RNA recognition and gene regulation by the TRIM-NHL protein Mei-P26.
Life Sci Alliance, 5, 2022
7OF9
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BU of 7of9 by Molmil
Keap1 kelch domain bound to a small molecule fragment
Descriptor: DIMETHYL SULFOXIDE, Kelch-like ECH-associated protein 1, [(4S)-6,7-dihydro-4H-thieno[3,2-c]pyran-4-yl]methanamine
Authors:Narayanan, D, Bach, A, Gajhede, M.
Deposit date:2021-05-04
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Development of Noncovalent Small-Molecule Keap1-Nrf2 Inhibitors by Fragment-Based Drug Discovery.
J.Med.Chem., 65, 2022
7OFD
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BU of 7ofd by Molmil
Keap1 kelch domain bound to a small molecule fragment
Descriptor: 6-fluoranyl-2-methyl-quinolin-4-ol, DIMETHYL SULFOXIDE, Kelch-like ECH-associated protein 1, ...
Authors:Narayanan, D, Bach, A, Gajhede, M.
Deposit date:2021-05-04
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Development of Noncovalent Small-Molecule Keap1-Nrf2 Inhibitors by Fragment-Based Drug Discovery.
J.Med.Chem., 65, 2022
7OFA
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BU of 7ofa by Molmil
Keap1 kelch domain bound to a small molecule fragment
Descriptor: 2,6-bis(chloranyl)-5-fluoranyl-pyridine-3-carboxylic acid, DIMETHYL SULFOXIDE, Kelch-like ECH-associated protein 1
Authors:Narayanan, D, Bach, A, Gajhede, M.
Deposit date:2021-05-04
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Development of Noncovalent Small-Molecule Keap1-Nrf2 Inhibitors by Fragment-Based Drug Discovery.
J.Med.Chem., 65, 2022
7OFF
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BU of 7off by Molmil
Keap1 kelch domain bound to a small molecule inhibitor of the Keap1-Nrf2 protein-protein interaction
Descriptor: (2~{R})-2-[(9-oxidanylidenefluoren-4-yl)carbonylamino]-2-phenyl-ethanoic acid, DIMETHYL SULFOXIDE, Kelch-like ECH-associated protein 1, ...
Authors:Narayanan, D, Bach, A, Gajhede, M.
Deposit date:2021-05-04
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Development of Noncovalent Small-Molecule Keap1-Nrf2 Inhibitors by Fragment-Based Drug Discovery.
J.Med.Chem., 65, 2022
7OFB
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BU of 7ofb by Molmil
Keap1 kelch domain bound to a small molecule fragment
Descriptor: DIMETHYL SULFOXIDE, Kelch-like ECH-associated protein 1, SULFATE ION, ...
Authors:Narayanan, D, Bach, A, Gajhede, M.
Deposit date:2021-05-04
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Development of Noncovalent Small-Molecule Keap1-Nrf2 Inhibitors by Fragment-Based Drug Discovery.
J.Med.Chem., 65, 2022
7OFE
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BU of 7ofe by Molmil
Keap1 kelch domain bound to a small molecule inhibitor of the Keap1-Nrf2 protein-protein interaction
Descriptor: 2-[(9-oxidanylidenefluoren-4-yl)carbonylamino]ethanoic acid, DIMETHYL SULFOXIDE, Kelch-like ECH-associated protein 1, ...
Authors:Narayanan, D, Bach, A, Gajhede, M.
Deposit date:2021-05-04
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Development of Noncovalent Small-Molecule Keap1-Nrf2 Inhibitors by Fragment-Based Drug Discovery.
J.Med.Chem., 65, 2022
7OFC
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BU of 7ofc by Molmil
Keap1 kelch domain bound to a small molecule fragment
Descriptor: DIMETHYL SULFOXIDE, Kelch-like ECH-associated protein 1, SULFATE ION, ...
Authors:Narayanan, D, Bach, A, Gajhede, M.
Deposit date:2021-05-04
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Development of Noncovalent Small-Molecule Keap1-Nrf2 Inhibitors by Fragment-Based Drug Discovery.
J.Med.Chem., 65, 2022
7OF8
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BU of 7of8 by Molmil
Keap1 kelch domain bound to a small molecule fragment
Descriptor: (2~{S})-2-cyclopentyl-2-oxidanyl-2-phenyl-ethanoic acid, Kelch-like ECH-associated protein 1
Authors:Narayanan, D, Bach, A, Gajhede, M.
Deposit date:2021-05-04
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Development of Noncovalent Small-Molecule Keap1-Nrf2 Inhibitors by Fragment-Based Drug Discovery.
J.Med.Chem., 65, 2022
6OF7
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BU of 6of7 by Molmil
Crystal structure of the CRY1-PER2 complex
Descriptor: Cryptochrome-1, Period circadian protein homolog 2
Authors:Michael, A.K, Fribourgh, J.L, Tripathi, S.M, Partch, C.L.
Deposit date:2019-03-28
Release date:2020-03-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Dynamics at the serine loop underlie differential affinity of cryptochromes for CLOCK:BMAL1 to control circadian timing.
Elife, 9, 2020
8HNP
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BU of 8hnp by Molmil
Archaeal transcription factor Mutant
Descriptor: Archaeal transcription regulator
Authors:Bae, D.W, Cha, S.S.
Deposit date:2022-12-08
Release date:2023-09-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.39 Å)
Cite:An archaeal transcription factor EnfR with a novel 'eighth note' fold controls hydrogen production of a hyperthermophilic archaeon Thermococcus onnurineus NA1.
Nucleic Acids Res., 51, 2023
8HNO
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BU of 8hno by Molmil
Archaeal transcription factor Wild type
Descriptor: Archaeal transcription regulator
Authors:Bae, D.W, Cha, S.S.
Deposit date:2022-12-08
Release date:2023-09-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:An archaeal transcription factor EnfR with a novel 'eighth note' fold controls hydrogen production of a hyperthermophilic archaeon Thermococcus onnurineus NA1.
Nucleic Acids Res., 51, 2023

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PDB entries from 2024-11-06

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