Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4HNV
DownloadVisualize
BU of 4hnv by Molmil
Crystal structure of R54E mutant of S. aureus Pyruvate carboxylase
Descriptor: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Yu, L.P.C, Tong, L.
Deposit date:2012-10-21
Release date:2013-01-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Characterizing the Importance of the Biotin Carboxylase Domain Dimer for Staphylococcus aureus Pyruvate Carboxylase Catalysis.
Biochemistry, 52, 2013
4HNT
DownloadVisualize
BU of 4hnt by Molmil
crystal structure of F403A mutant of S. aureus Pyruvate carboxylase
Descriptor: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Yu, L.P.C, Tong, L.
Deposit date:2012-10-21
Release date:2013-01-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Characterizing the Importance of the Biotin Carboxylase Domain Dimer for Staphylococcus aureus Pyruvate Carboxylase Catalysis.
Biochemistry, 52, 2013
5A50
DownloadVisualize
BU of 5a50 by Molmil
The crystal structure of Arabidopsis thaliana CAR4 in complex with two calcium ions, Zn and Phopho Choline
Descriptor: AT3G17980, CALCIUM ION, PHOSPHOCHOLINE, ...
Authors:Diaz, M, Albert, A.
Deposit date:2015-06-16
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Calcium-Dependent Oligomerization of Car Proteins at Cell Membrane Modulates Aba Signaling.
Proc.Natl.Acad.Sci.USA, 113, 2016
4XCE
DownloadVisualize
BU of 4xce by Molmil
Crystal structure of human 4E10 Fab crystalized in the presence of Phosphatidylcholine (06:0 PC); C2 space group
Descriptor: 4E10 Fab heavy chain, 4E10 Fab light chain
Authors:Irimia, A, Stanfield, R.L, Wilson, I.A.
Deposit date:2014-12-17
Release date:2016-02-03
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:Crystallographic Identification of Lipid as an Integral Component of the Epitope of HIV Broadly Neutralizing Antibody 4E10.
Immunity, 44, 2016
4XCC
DownloadVisualize
BU of 4xcc by Molmil
Crystal structure of human 4E10 Fab crystalized in the presence of Phosphatidylcholine (06:0 PC); I422 space group
Descriptor: 4E10 Fab Heavy chain, 4E10 Fab light chain, GLYCEROL
Authors:Irimia, A, Stanfield, R.L, Wilson, I.A.
Deposit date:2014-12-17
Release date:2016-02-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Crystallographic Identification of Lipid as an Integral Component of the Epitope of HIV Broadly Neutralizing Antibody 4E10.
Immunity, 44, 2016
9F5Y
DownloadVisualize
BU of 9f5y by Molmil
Structure of the Chlamydomonas reinhardtii respiratory complex I from respiratory supercomplex
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, (7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, ...
Authors:Waltz, F, Righetto, R, Kotecha, A, Engel, B.D.
Deposit date:2024-04-30
Release date:2025-03-12
Last modified:2025-04-02
Method:ELECTRON MICROSCOPY (2.51 Å)
Cite:In-cell architecture of the mitochondrial respiratory chain.
Science, 387, 2025
6CUG
DownloadVisualize
BU of 6cug by Molmil
Crystal structure of BC8B TCR-CD1b-PC complex
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, ...
Authors:Shahine, A.E, Rossjohn, J.
Deposit date:2018-03-26
Release date:2019-01-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A T-cell receptor escape channel allows broad T-cell response to CD1b and membrane phospholipids.
Nat Commun, 10, 2019
4R6W
DownloadVisualize
BU of 4r6w by Molmil
Plasmodium falciparum phosphoethanolamine methyltransferase D128A mutant in complex with S-adenosylhomocysteine and phosphocholine
Descriptor: PHOSPHOCHOLINE, Phosphoethanolamine N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Lee, S.G, Jez, J.M.
Deposit date:2014-08-26
Release date:2014-10-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5894 Å)
Cite:An Alternative Mechanism for the Methylation of Phosphoethanolamine Catalyzed by Plasmodium falciparum Phosphoethanolamine Methyltransferase.
J.Biol.Chem., 289, 2014
9F5X
DownloadVisualize
BU of 9f5x by Molmil
Structure of the Chlamydomonas reinhardtii respiratory supercomplex I1 III2 IV2
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, (7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, ...
Authors:Waltz, F, Righetto, R, Kotecha, A, Engel, B.D.
Deposit date:2024-04-30
Release date:2025-03-12
Last modified:2025-04-02
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:In-cell architecture of the mitochondrial respiratory chain.
Science, 387, 2025
8WCR
DownloadVisualize
BU of 8wcr by Molmil
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in open state
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CHLORIDE ION, Proton-gated ion channel
Authors:Bharambe, N, Li, Z, Basak, S.
Deposit date:2023-09-13
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Cryo-EM structures of prokaryotic ligand-gated ion channel GLIC provide insights into gating in a lipid environment.
Nat Commun, 15, 2024
5WP4
DownloadVisualize
BU of 5wp4 by Molmil
Arabidopsis thaliana phosphoethanolamine N-methyltransferase 1 (AtPMT1, XIOPTL) in complex with SAH and phosphocholine
Descriptor: PHOSPHOCHOLINE, Phosphoethanolamine N-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Lee, S.G, Jez, J.M.
Deposit date:2017-08-03
Release date:2017-11-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.341 Å)
Cite:Conformational changes in the di-domain structure of Arabidopsis phosphoethanolamine methyltransferase leads to active-site formation.
J. Biol. Chem., 292, 2017
9BR4
DownloadVisualize
BU of 9br4 by Molmil
Crystal structure of p53 Y220C mutant in complex with PC-9859
Descriptor: 2-methyl-2-{5-[(3-{4-[(1-methylpiperidin-4-yl)amino]-1-(2,2,2-trifluoroethyl)-1H-indol-2-yl}prop-2-yn-1-yl)amino]pyridin-2-yl}propanenitrile, CHLORIDE ION, Cellular tumor antigen p53, ...
Authors:Abendroth, J, Lorimer, D.D, Vu, B, Takana, N.
Deposit date:2024-05-10
Release date:2024-12-18
Last modified:2025-01-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery of Rezatapopt (PC14586), a First-in-Class, Small-Molecule Reactivator of p53 Y220C Mutant in Development.
Acs Med.Chem.Lett., 16, 2025
8OXB
DownloadVisualize
BU of 8oxb by Molmil
Cryo-EM structure of ATP8B1-CDC50A in E2-Pi conformation with occluded PC
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell cycle control protein 50A, ...
Authors:Dieudonne, T, Kummerer, F, Juknaviciute Laursen, M, Stock, C, Kock Flygaard, R, Khalid, S, Lenoir, G, Lyons, J.A, Lindorff-Larsen, K, Nissen, P.
Deposit date:2023-05-01
Release date:2023-11-29
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Activation and substrate specificity of the human P4-ATPase ATP8B1.
Nat Commun, 14, 2023
1MCP
DownloadVisualize
BU of 1mcp by Molmil
PHOSPHOCHOLINE BINDING IMMUNOGLOBULIN FAB MC/PC603. AN X-RAY DIFFRACTION STUDY AT 2.7 ANGSTROMS
Descriptor: IGA-KAPPA MCPC603 FAB (HEAVY CHAIN), IGA-KAPPA MCPC603 FAB (LIGHT CHAIN), SULFATE ION
Authors:Satow, Y, Cohen, G.H, Padlan, E.A, Davies, D.R.
Deposit date:1984-07-09
Release date:1985-01-02
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Phosphocholine binding immunoglobulin Fab McPC603. An X-ray diffraction study at 2.7 A.
J.Mol.Biol., 190, 1986
8I42
DownloadVisualize
BU of 8i42 by Molmil
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 7.5
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Proton-gated ion channel
Authors:Bharambe, N, Li, Z, Basak, S.
Deposit date:2023-01-18
Release date:2024-04-10
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Cryo-EM structures of prokaryotic ligand-gated ion channel GLIC provide insights into gating in a lipid environment.
Nat Commun, 15, 2024
8I47
DownloadVisualize
BU of 8i47 by Molmil
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 5.5
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Proton-gated ion channel
Authors:Bharambe, N, Li, Z, Basak, S.
Deposit date:2023-01-18
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structures of prokaryotic ligand-gated ion channel GLIC provide insights into gating in a lipid environment.
Nat Commun, 15, 2024
2X6C
DownloadVisualize
BU of 2x6c by Molmil
Potassium Channel from Magnetospirillum Magnetotacticum
Descriptor: ATP-SENSITIVE INWARD RECTIFIER POTASSIUM CHANNEL 10, CHLORIDE ION, PHOSPHOCHOLINE, ...
Authors:Clarke, O.B, Caputo, A.T, Hill, A.P, Vandenberg, J.I, Smith, B.J, Gulbis, J.M.
Deposit date:2010-02-15
Release date:2010-06-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Domain Reorientation and Rotation of an Intracellular Assembly Regulate Conduction in Kir Potassium Channels.
Cell(Cambridge,Mass.), 141, 2010
2X6A
DownloadVisualize
BU of 2x6a by Molmil
Potassium Channel from Magnetospirillum Magnetotacticum
Descriptor: ATP-SENSITIVE INWARD RECTIFIER POTASSIUM CHANNEL 10, PHOSPHOCHOLINE, POTASSIUM ION
Authors:Clarke, O.B, Caputo, A.T, Hill, A.P, Vandenberg, J.I, Smith, B.J, Gulbis, J.M.
Deposit date:2010-02-15
Release date:2010-06-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Domain Reorientation and Rotation of an Intracellular Assembly Regulate Conduction in Kir Potassium Channels.
Cell(Cambridge,Mass.), 141, 2010
2X6B
DownloadVisualize
BU of 2x6b by Molmil
Potassium Channel from Magnetospirillum Magnetotacticum
Descriptor: ATP-SENSITIVE INWARD RECTIFIER POTASSIUM CHANNEL 10, BARIUM ION, PHOSPHOCHOLINE, ...
Authors:Clarke, O.B, Caputo, A.T, Hill, A.P, Vandenberg, J.I, Smith, B.J, Gulbis, J.M.
Deposit date:2010-02-15
Release date:2010-06-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Domain Reorientation and Rotation of an Intracellular Assembly Regulate Conduction in Kir Potassium Channels.
Cell(Cambridge,Mass.), 141, 2010
8BEL
DownloadVisualize
BU of 8bel by Molmil
Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (CIII membrane domain)
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, (7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, ...
Authors:Klusch, N, Kuehlbrandt, W.
Deposit date:2022-10-21
Release date:2023-01-11
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.25 Å)
Cite:Cryo-EM structure of the respiratory I + III 2 supercomplex from Arabidopsis thaliana at 2 angstrom resolution.
Nat.Plants, 9, 2023
8BEH
DownloadVisualize
BU of 8beh by Molmil
Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (CI membrane tip)
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, (7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, ...
Authors:Klusch, N, Kuehlbrandt, W.
Deposit date:2022-10-21
Release date:2023-01-11
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.29 Å)
Cite:Cryo-EM structure of the respiratory I + III 2 supercomplex from Arabidopsis thaliana at 2 angstrom resolution.
Nat.Plants, 9, 2023
8BEF
DownloadVisualize
BU of 8bef by Molmil
Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (CI membrane core)
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, (7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, ...
Authors:Klusch, N, Kuehlbrandt, W.
Deposit date:2022-10-21
Release date:2023-01-11
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.13 Å)
Cite:Cryo-EM structure of the respiratory I + III 2 supercomplex from Arabidopsis thaliana at 2 angstrom resolution.
Nat.Plants, 9, 2023
3LKF
DownloadVisualize
BU of 3lkf by Molmil
LEUKOCIDIN F (HLGB) FROM STAPHYLOCOCCUS AUREUS WITH PHOSPHOCHOLINE BOUND
Descriptor: LEUKOCIDIN F SUBUNIT, PHOSPHOCHOLINE
Authors:Olson, R, Nariya, H, Yokota, K, Kamio, Y, Gouaux, J.E.
Deposit date:1998-07-28
Release date:1999-07-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of staphylococcal LukF delineates conformational changes accompanying formation of a transmembrane channel.
Nat.Struct.Biol., 6, 1999
6AKP
DownloadVisualize
BU of 6akp by Molmil
Crystal Structural of FOXC2 DNA binding domain bound to PC promoter
Descriptor: DNA (5'-D(AP*CP*AP*CP*AP*AP*AP*TP*AP*TP*TP*TP*GP*TP*GP*T)-3'), Forkhead box protein C2, MAGNESIUM ION
Authors:Chen, X, Wei, H, Li, J, Liang, X, Dai, S, Jiang, L, Guo, M, Chen, Y.
Deposit date:2018-09-03
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.323 Å)
Cite:Structural basis for DNA recognition by FOXC2.
Nucleic Acids Res., 47, 2019
2BIB
DownloadVisualize
BU of 2bib by Molmil
Crystal structure of the complete modular teichioic acid phosphorylcholine esterase Pce (CbpE) from Streptococcus pneumoniae
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, PHOSPHOCHOLINE, ...
Authors:Hermoso, J.A, Lagartera, L, Gonzalez, A, Garcia, P, Martinez-Ripoll, M, Garcia, J.L, Menendez, M.
Deposit date:2005-01-20
Release date:2005-05-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Insights Into Pneumococcal Pathogenesis from Crystal Structure of the Modular Teichoic Acid Phosphorylcholine Esterase Pce
Nat.Struct.Mol.Biol., 12, 2005

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon