Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1SIP
DownloadVisualize
BU of 1sip by Molmil
ALTERNATIVE NATIVE FLAP CONFORMATION REVEALED BY 2.3 ANGSTROMS RESOLUTION STRUCTURE OF SIV PROTEINASE
Descriptor: UNLIGANDED SIV PROTEASE
Authors:Wilderspin, A.F.
Deposit date:1994-04-13
Release date:1994-08-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Alternative native flap conformation revealed by 2.3 A resolution structure of SIV proteinase.
J.Mol.Biol., 239, 1994
6A9A
DownloadVisualize
BU of 6a9a by Molmil
Ternary complex crystal structure of dCH with dCMP and THF
Descriptor: (6S)-5,6,7,8-TETRAHYDROFOLATE, 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, Deoxycytidylate 5-hydroxymethyltransferase, ...
Authors:Park, S.H, Song, H.K.
Deposit date:2018-07-12
Release date:2019-01-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A cytosine modification mechanism revealed by the structure of a ternary complex of deoxycytidylate hydroxymethylase from bacteriophage T4 with its cofactor and substrate.
Iucrj, 6, 2019
3FDO
DownloadVisualize
BU of 3fdo by Molmil
Structure of human MDMX in complex with high affinity peptide
Descriptor: MAGNESIUM ION, Protein Mdm4, Synthetic high affinity peptide
Authors:Czarna, A.L, Popowicz, G.M, Holak, T.A.
Deposit date:2008-11-26
Release date:2008-12-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:High affinity interaction of the p53 peptide-analogue with human Mdm2 and Mdmx.
Cell Cycle, 8, 2009
2M0F
DownloadVisualize
BU of 2m0f by Molmil
Solution Structure of Miz-1 zinc finger 7
Descriptor: ZINC ION, Zinc finger and BTB domain-containing protein 17
Authors:Bernard, D, Bedard, M, Bilodeau, J, Lavigne, P.
Deposit date:2012-10-24
Release date:2012-11-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structure Note: Solution Structure of Miz-1 Zinc Fingers 5 to 7
To be Published
1R5M
DownloadVisualize
BU of 1r5m by Molmil
Crystal Structure Of The C-Terminal WD40 Domain Of Sif2
Descriptor: SIR4-interacting protein SIF2, SULFATE ION
Authors:Cerna, D, Wilson, D.K.
Deposit date:2003-10-10
Release date:2005-03-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The structure of Sif2p, a WD repeat protein functioning in the SET3 corepressor complex.
J.Mol.Biol., 351, 2005
2M0D
DownloadVisualize
BU of 2m0d by Molmil
Solution Structure of Miz-1 zinc finger 5
Descriptor: ZINC ION, Zinc finger and BTB domain-containing protein 17
Authors:Bernard, D, Bedard, M, Bilodeau, J, Lavigne, P.
Deposit date:2012-10-24
Release date:2012-11-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structure Note: Structure of Miz-1 Zinc Fingers 5 to 7
To be Published
3FIM
DownloadVisualize
BU of 3fim by Molmil
Crystal structure of aryl-alcohol-oxidase from Pleurotus eryingii
Descriptor: Aryl-alcohol oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Fernandez, I.S.
Deposit date:2008-12-12
Release date:2009-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Novel structural features in the GMC family of oxidoreductases revealed by the crystal structure of fungal aryl-alcohol oxidase
Acta Crystallogr.,Sect.D, 65, 2009
2M0E
DownloadVisualize
BU of 2m0e by Molmil
Solution Structure of Miz-1 zinc finger 6
Descriptor: ZINC ION, Zinc finger and BTB domain-containing protein 17
Authors:Bernard, D, Bedard, M, Bilodeau, J, Lavigne, P.
Deposit date:2012-10-24
Release date:2012-11-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structure Note: Solution Structure of Miz-1 Zinc Fingers 5 to 7
To be Published
2DSA
DownloadVisualize
BU of 2dsa by Molmil
Ternary complex of BphK, a bacterial GST
Descriptor: (2Z,4E)-2-HYDROXY-6-OXO-6-PHENYLHEXA-2,4-DIENOIC ACID, GLUTATHIONE, Glutathione S-transferase
Authors:Tocheva, E.I, Murphy, M.E.P.
Deposit date:2006-06-24
Release date:2006-08-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of ternary complexes of BphK, a bacterial glutathione S-transferase that reductively dechlorinates polychlorinated biphenyl metabolites
J.Biol.Chem., 281, 2006
6F0K
DownloadVisualize
BU of 6f0k by Molmil
Alternative complex III
Descriptor: ActD, ActF, ActH, ...
Authors:Sousa, J.S, Calisto, F, Mills, D.J, Pereira, M.M, Vonck, J, Kuehlbrandt, W.
Deposit date:2017-11-20
Release date:2018-05-09
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Structural basis for energy transduction by respiratory alternative complex III.
Nat Commun, 9, 2018
3CTY
DownloadVisualize
BU of 3cty by Molmil
Crystal structure of T. acidophilum thioredoxin reductase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin reductase
Authors:Hernandez, H.H, Drennan, C.L.
Deposit date:2008-04-14
Release date:2009-02-24
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Thioredoxin reductase from Thermoplasma acidophilum: a new twist on redox regulation.
Biochemistry, 47, 2008
1C6Z
DownloadVisualize
BU of 1c6z by Molmil
ALTERNATE BINDING SITE FOR THE P1-P3 GROUP OF A CLASS OF POTENT HIV-1 PROTEASE INHIBITORS AS A RESULT OF CONCERTED STRUCTURAL CHANGE IN 80'S LOOP.
Descriptor: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, PROTEIN (PROTEASE)
Authors:Munshi, S.
Deposit date:1999-12-28
Release date:2000-12-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:An alternate binding site for the P1-P3 group of a class of potent HIV-1 protease inhibitors as a result of concerted structural change in the 80s loop of the protease.
Acta Crystallogr.,Sect.D, 56, 2000
1UYQ
DownloadVisualize
BU of 1uyq by Molmil
mutated b-glucosidase A from Paenibacillus polymyxa showing increased stability
Descriptor: 2,4-dinitrophenyl 2-deoxy-2-fluoro-beta-D-glucopyranoside, 2-deoxy-2-fluoro-alpha-D-glucopyranose, BETA-GLUCOSIDASE A
Authors:Isorna, P, Polaina, J, Sanz-Aparicio, J.
Deposit date:2004-03-02
Release date:2005-03-03
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutated B-Glucosidase a from Paenibacillus Polymyxa Showing Increased Stability
To be Published
3KY7
DownloadVisualize
BU of 3ky7 by Molmil
2.35 Angstrom resolution crystal structure of a putative tRNA (guanine-7-)-methyltransferase (trmD) from Staphylococcus aureus subsp. aureus MRSA252
Descriptor: tRNA (guanine-N(1)-)-methyltransferase
Authors:Halavaty, A.S, Minasov, G, Winsor, J, Dubrovska, I, Shuvalova, L, See, R, Zoraghi, R, Reiner, N, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-12-04
Release date:2009-12-22
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:2.35 Angstrom resolution crystal structure of a putative tRNA (guanine-7-)-methyltransferase (trmD) from Staphylococcus aureus subsp. aureus MRSA252
To be Published
1QAY
DownloadVisualize
BU of 1qay by Molmil
TERNARY COMPLEX OF PSEUDOMONAS MEVALONII HMG-COA REDUCTASE WITH MEVALONATE AND NAD+
Descriptor: (R)-MEVALONATE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PROTEIN (3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE)
Authors:Tabernero, L, Bochar, D.A, Rodwell, V.W, Stauffacher, C.V.
Deposit date:1999-04-07
Release date:1999-06-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Substrate-induced closure of the flap domain in the ternary complex structures provides insights into the mechanism of catalysis by 3-hydroxy-3-methylglutaryl-CoA reductase.
Proc.Natl.Acad.Sci.USA, 96, 1999
1PYT
DownloadVisualize
BU of 1pyt by Molmil
TERNARY COMPLEX OF PROCARBOXYPEPTIDASE A, PROPROTEINASE E, AND CHYMOTRYPSINOGEN C
Descriptor: CALCIUM ION, CHYMOTRYPSINOGEN C, PROCARBOXYPEPTIDASE A, ...
Authors:Gomis-Ruth, F.X, Gomez, M, Bode, W, Huber, R, Aviles, F.X.
Deposit date:1995-06-21
Release date:1997-01-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The three-dimensional structure of the native ternary complex of bovine pancreatic procarboxypeptidase A with proproteinase E and chymotrypsinogen C.
EMBO J., 14, 1995
1QAX
DownloadVisualize
BU of 1qax by Molmil
TERNARY COMPLEX OF PSEUDOMONAS MEVALONII HMG-COA REDUCTASE WITH HMG-COA AND NAD+
Descriptor: 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PROTEIN (3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE)
Authors:Tabernero, L, Bochar, D.A, Rodwell, V.W, Stauffacher, C.V.
Deposit date:1999-04-06
Release date:1999-06-18
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Substrate-induced closure of the flap domain in the ternary complex structures provides insights into the mechanism of catalysis by 3-hydroxy-3-methylglutaryl-CoA reductase.
Proc.Natl.Acad.Sci.USA, 96, 1999
3H2K
DownloadVisualize
BU of 3h2k by Molmil
Crystal structure of a ligand-bound form of the rice cell wall degrading esterase LipA from Xanthomonas oryzae
Descriptor: esterase, octyl beta-D-glucopyranoside
Authors:Aparna, G, Chatterjee, A, Sonti, R.V, Sankaranarayanan, R.
Deposit date:2009-04-14
Release date:2009-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Cell Wall-Degrading Esterase of Xanthomonas oryzae Requires a Unique Substrate Recognition Module for Pathogenesis on Rice
Plant Cell, 21, 2009
3H2H
DownloadVisualize
BU of 3h2h by Molmil
Crystal structure of G231F mutant of the rice cell wall degrading esterase LipA from Xanthomonas oryzae
Descriptor: esterase
Authors:Aparna, G, Chatterjee, A, Sonti, R.V, Sankaranarayanan, R.
Deposit date:2009-04-14
Release date:2009-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Cell Wall-Degrading Esterase of Xanthomonas oryzae Requires a Unique Substrate Recognition Module for Pathogenesis on Rice
Plant Cell, 21, 2009
3GLJ
DownloadVisualize
BU of 3glj by Molmil
A polymorph of carboxypeptidase B zymogen structure
Descriptor: Carboxypeptidase B, GLYCEROL, ZINC ION
Authors:Fernandez, D.
Deposit date:2009-03-12
Release date:2009-10-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Analysis of a new crystal form of procarboxypeptidase B: further insights into the catalytic mechanism
Biopolymers, 2009
3H2I
DownloadVisualize
BU of 3h2i by Molmil
Crystal structure of N228W mutant of the rice cell wall degrading esterase LipA from Xanthomonas oryzae
Descriptor: esterase
Authors:Aparna, G, Chatterjee, A, Sonti, R.V, Sankaranarayanan, R.
Deposit date:2009-04-14
Release date:2009-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Cell Wall-Degrading Esterase of Xanthomonas oryzae Requires a Unique Substrate Recognition Module for Pathogenesis on Rice
Plant Cell, 21, 2009
3H2G
DownloadVisualize
BU of 3h2g by Molmil
Crystal structure of a rice cell wall degrading esterase LipA from Xanthomonas oryzae
Descriptor: esterase
Authors:Aparna, G, Chatterjee, A, Sonti, R.V, Sankaranarayanan, R.
Deposit date:2009-04-14
Release date:2009-08-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:A Cell Wall-Degrading Esterase of Xanthomonas oryzae Requires a Unique Substrate Recognition Module for Pathogenesis on Rice
Plant Cell, 21, 2009
1O94
DownloadVisualize
BU of 1o94 by Molmil
Ternary complex between trimethylamine dehydrogenase and electron transferring flavoprotein
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ELECTRON TRANSFER FLAVOPROTEIN ALPHA-SUBUNIT, ...
Authors:Leys, D, Basran, J, Talfournier, F, Sutcliffe, M.J, Scrutton, N.S.
Deposit date:2002-12-11
Release date:2003-02-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Extensive Conformational Sampling in a Ternary Electron Transfer Complex.
Nat.Struct.Biol., 10, 2003
7AKK
DownloadVisualize
BU of 7akk by Molmil
Structure of a complement factor-receptor complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Complement C3 beta chain, Complement C3b alpha' chain, ...
Authors:Fernandez, F.J, Santos-Lopez, J, Martinez-Barricarte, R, Querol-Garcia, J, Navas-Yuste, S, Savko, M, Shepard, W.E, Rodriguez de Cordoba, S, Vega, M.C.
Deposit date:2020-10-01
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.395 Å)
Cite:The crystal structure of iC3b-CR3 alpha I reveals a modular recognition of the main opsonin iC3b by the CR3 integrin receptor
Nat Commun, 13, 2022
1C6X
DownloadVisualize
BU of 1c6x by Molmil
ALTERNATE BINDING SITE FOR THE P1-P3 GROUP OF A CLASS OF POTENT HIV-1 PROTEASE INHIBITORS AS A RESULT OF CONCERTED STRUCTURAL CHANGE IN 80'S LOOP.
Descriptor: N-[2(S)-CYCLOPENTYL-1(R)-HYDROXY-3(R)METHYL]-5-[(2(S)-TERTIARY-BUTYLAMINO-CARBONYL)-4-(N1-(2)-(N-METHYLPIPERAZINYL)-3-CHLORO-PYRAZINYL-5-CARBONYL)-PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYL-PENTANAMIDE, PROTEIN (PROTEASE)
Authors:Munshi, S.
Deposit date:1999-12-28
Release date:2000-12-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:An alternate binding site for the P1-P3 group of a class of potent HIV-1 protease inhibitors as a result of concerted structural change in the 80s loop of the protease.
Acta Crystallogr.,Sect.D, 56, 2000

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon