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8QPD
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BU of 8qpd by Molmil
Structure of thioredoxin m from pea
Descriptor: Thioredoxin M-type, chloroplastic
Authors:Neira, J.L, Camara Artigas, A.
Deposit date:2023-10-01
Release date:2024-02-14
Last modified:2024-03-27
Method:SOLUTION NMR
Cite:Three-dimensional solution structure, dynamics and binding of thioredoxin m from Pisum sativum.
Int.J.Biol.Macromol., 262, 2024
7QZV
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BU of 7qzv by Molmil
Hm-AMP2
Descriptor: Hm-AMP2
Authors:Grafskaia, E.N, Pavlova, E.R, Latsis, I.A, Malakhova, M.V, Lavrenova, V.N, Ivchenkov, D.V, Bashkirov, P.V, Kot, E.F, Mineev, K.S, Arseniev, A.S, Klinov, D.V, Lazarev, V.N.
Deposit date:2022-02-01
Release date:2022-11-23
Method:SOLUTION NMR
Cite:Non-toxic antimicrobial peptide Hm-AMP2 from leech metagenome proteins identified by the gradient-boosting approach
Materials, 224, 2022
7QZW
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Hm-AMP8
Descriptor: Hm-AMP8
Authors:Grafskaia, E.N, Pavlova, E.R, Latsis, I.A, Malakhova, M.V, Lavrenova, V.N, Ivchenkov, D.V, Bashkirov, P.V, Kot, E.F, Mineev, K.S, Arseniev, A.S, Klinov, D.V, Lazarev, V.N.
Deposit date:2022-02-01
Release date:2023-02-15
Method:SOLUTION NMR
Cite:The study of the interaction of cationic peptides from a medical leech with blood components as a first step to the systemic use of antimicrobial peptides for therapy of infectious diseases
To Be Published
8HJD
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Solution structure of cysteine-rich peptide Bidentatide (Achyranthes bidentata peptide) with glycation
Descriptor: Gly-bidentatide, beta-D-fructopyranose
Authors:Feng, Y, He, M, Zhang, X.
Deposit date:2022-11-23
Release date:2022-12-07
Method:SOLUTION NMR
Cite:Discovery of a cysteine-rich peptide with glycation modification from Achyranthes bidentata Blume.
Fitoterapia, 163, 2022
8HJC
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BU of 8hjc by Molmil
Solution structure of cysteine-rich peptide Bidentatide (Achyranthes bidentata peptide)
Descriptor: Bidentatide
Authors:Feng, Y, He, M, Zhang, X.
Deposit date:2022-11-23
Release date:2022-12-07
Method:SOLUTION NMR
Cite:Discovery of a cysteine-rich peptide with glycation modification from Achyranthes bidentata Blume.
Fitoterapia, 163, 2022
8CF2
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Solution structure of the RNA helix formed by the 5'-end of U1 snRNA and an A-1 bulged 5'-splice site in complex with SMN-CY
Descriptor: 4-[(3~{S})-3-ethylpiperazin-1-yl]-2-fluoranyl-~{N}-(2-methylimidazo[1,2-a]pyrazin-6-yl)benzamide, RNA (5'-R(P*AP*UP*AP*CP*(PSU)P*(PSU)P*AP*CP*CP*UP*G)-3'), RNA (5'-R(P*GP*GP*AP*GP*UP*AP*AP*GP*UP*CP*U)-3')
Authors:Malard, F, Marquevielle, J, Campagne, S.
Deposit date:2023-02-02
Release date:2024-02-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The diversity of splicing modifiers acting on A-1 bulged 5'-splice sites reveals rules for rational drug design.
Nucleic Acids Res., 52, 2024
7L7A
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BU of 7l7a by Molmil
Solution Structure of NuxVA
Descriptor: NuxVA
Authors:Mari, F, Dovell, S.
Deposit date:2020-12-28
Release date:2021-01-13
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Conus venom fractions inhibit the adhesion of Plasmodium falciparum erythrocyte membrane protein 1 domains to the host vascular receptors.
J Proteomics, 234, 2020
8COO
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BU of 8coo by Molmil
Solution structure of Zipcode binding protein 1 (ZBP1) KH3(DD)KH4 domains in complex with N6-Methyladenosine containing RNA
Descriptor: Insulin-like growth factor 2 mRNA-binding protein 1, RNA_(5'-R(*(UP*CP*GP*GP*(6MZ)P*CP*U)-3')
Authors:Nicastro, G, Abis, G, Taylor, I.A, Ramos, A.
Deposit date:2023-02-28
Release date:2024-02-07
Method:SOLUTION NMR
Cite:Direct m6A recognition by IMP1 underlays an alternative model of target selection for non-canonical methyl-readers.
Nucleic Acids Res., 51, 2023
8CM3
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BU of 8cm3 by Molmil
Solution structure of Mu3.1 from Conus mucronatus
Descriptor: Mu3.1
Authors:Lushpa, V.A, Mineev, K.S, Vassilevski, A.A, Koroev, D.O.
Deposit date:2023-02-17
Release date:2024-02-28
Method:SOLUTION NMR
Cite:Spatial structure of Mu 3.1 from Conus mucronatus
To Be Published
7JXG
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BU of 7jxg by Molmil
Structural model for Fe-containing human acireductone dioxygenase
Descriptor: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase, FE (II) ION
Authors:Pochapsky, T.C, Liu, X, Deshpande, A, Ringe, D, Garber, A, Ryan, J.
Deposit date:2020-08-27
Release date:2020-11-18
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A Model for the Solution Structure of Human Fe(II)-Bound Acireductone Dioxygenase and Interactions with the Regulatory Domain of Matrix Metalloproteinase I (MMP-I).
Biochemistry, 59, 2020
8DOA
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BU of 8doa by Molmil
Solution structure of a model HEEH mini-protein (HEEH_TK_rd5_0958)
Descriptor: HEEH mini-protein TK_rd5_0958
Authors:Houliston, S, Kim, T.-E, Rocklin, G, Arrowsmith, C.H.
Deposit date:2022-07-12
Release date:2022-10-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Dissecting the stability determinants of a challenging de novo protein fold using massively parallel design and experimentation.
Proc.Natl.Acad.Sci.USA, 119, 2022
8DYN
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BU of 8dyn by Molmil
Antimicrobial lasso peptide cloacaenodin
Descriptor: Cloacaenodin
Authors:Carson, D.V, Link, A.J.
Deposit date:2022-08-04
Release date:2022-12-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Cloacaenodin, an Antimicrobial Lasso Peptide with Activity against Enterobacter .
Acs Infect Dis., 9, 2023
8DPY
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BU of 8dpy by Molmil
Synthetic Beta Sheet Macrocycle Stabilized by Hydrogen Bond Surrogates
Descriptor: beta sheet-forming peptide with flexible linker
Authors:Lu, B, Vecchioni, S, Nazzaro, A, Arora, P.S.
Deposit date:2022-07-18
Release date:2023-05-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1 Å)
Cite:Macrocyclic beta-Sheets Stabilized by Hydrogen Bond Surrogates.
Angew.Chem.Int.Ed.Engl., 62, 2023
7K7F
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BU of 7k7f by Molmil
Solution Structure of the Corynebacterium diphtheriae SpaA Pilin-Signal Peptide Complex
Descriptor: Putative surface-anchored fimbrial subunit, SpaA sorting signal peptide
Authors:McConnell, S.A, Clubb, R.T.
Deposit date:2020-09-22
Release date:2021-03-10
Last modified:2021-04-21
Method:SOLUTION NMR
Cite:Sortase-assembled pili in Corynebacterium diphtheriae are built using a latch mechanism.
Proc.Natl.Acad.Sci.USA, 118, 2021
4AOG
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BU of 4aog by Molmil
Solution structure of the Class II hydrophobin NC2
Descriptor: NC2
Authors:Ren, Q, Kwan, A.H, Sunde, M.
Deposit date:2012-03-26
Release date:2013-06-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution Structure and Interface-Driven Self-Assembly of Nc2, a New Member of the Class II Hydrophobin Proteins.
Proteins, 82, 2014
7CKE
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BU of 7cke by Molmil
Solution structure of NCR169 oxidized form 2 from Medicago truncatula
Descriptor: Nodule Cysteine-Rich (NCR) secreted peptide
Authors:Isozumi, N, Masubuchi, Y, Ohki, S.
Deposit date:2020-07-16
Release date:2021-05-26
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and antimicrobial activity of NCR169, a nodule-specific cysteine-rich peptide of Medicago truncatula.
Sci Rep, 11, 2021
7CKD
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BU of 7ckd by Molmil
Solution structure of NCR169 oxidized form 1 from Medicago truncatula
Descriptor: Nodule Cysteine-Rich (NCR) secreted peptide
Authors:Isozumi, N, Masubuchi, Y, Ohki, S.
Deposit date:2020-07-16
Release date:2021-05-26
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and antimicrobial activity of NCR169, a nodule-specific cysteine-rich peptide of Medicago truncatula.
Sci Rep, 11, 2021
7CSS
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BU of 7css by Molmil
Solution structure of the topological isomer of Heat-stable enterotoxin produced by Enterotoxigenic Escherichia coli
Descriptor: CYS-CYS-GLU-LEU-CYS-CYS-ASN-PRO-ALA-CYS-THR-GLY-CYS
Authors:Shimamoto, S, Hidaka, Y.
Deposit date:2020-08-17
Release date:2020-12-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Topological Regulation of the Bioactive Conformation of a Disulfide-Rich Peptide, Heat-Stable Enterotoxin.
Molecules, 25, 2020
7D37
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BU of 7d37 by Molmil
Solution structure of Acm2-precursor peptide of Heat-stable enterotoxin produced by Enterotoxigenic Escherichia coli
Descriptor: CYS-CY1-GLU-LEU-CYS-CYS-ASN-PRO-ALA-CY1-THR-GLY-CYS
Authors:Shimamoto, S, Hidaka, Y.
Deposit date:2020-09-18
Release date:2020-12-16
Method:SOLUTION NMR
Cite:Topological Regulation of the Bioactive Conformation of a Disulfide-Rich Peptide, Heat-Stable Enterotoxin.
Molecules, 25, 2020
6R5G
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BU of 6r5g by Molmil
C-SH2 domain of SHP-2 in complex with phospho-ITSM of PD-1
Descriptor: ITSM, Tyrosine-protein phosphatase non-receptor type 11
Authors:Marasco, M.
Deposit date:2019-03-25
Release date:2020-02-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Molecular mechanism of SHP2 activation by PD-1 stimulation.
Sci Adv, 6, 2020
8AAC
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BU of 8aac by Molmil
African cichlid nackednavirus capsid at pH 7.5
Descriptor: C protein
Authors:Pfister, S, Rabl, J, Boehringer, D, Meier, B.H.
Deposit date:2022-07-01
Release date:2023-04-05
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural conservation of HBV-like capsid proteins over hundreds of millions of years despite the shift from non-enveloped to enveloped life-style.
Nat Commun, 14, 2023
7D5F
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BU of 7d5f by Molmil
Left-handed G-quadruplex containing 3 bulges
Descriptor: 3xBulge-LHG4motif
Authors:Winnerdy, F.R, Das, P, Ngo, K.H, Maity, A, Bakalar, B, Mechulam, Y, Schmitt, E, Phan, A.T.
Deposit date:2020-09-25
Release date:2021-02-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Bulges in left-handed G-quadruplexes.
Nucleic Acids Res., 49, 2021
8HR3
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BU of 8hr3 by Molmil
[D-Cys5,Asp7,Val8,D-Lys16]-STp(5-17)
Descriptor: DCY-CYS-ASP-VAL-CYS-CYS-ASN-PRO-ALA-CYS-ALA-DLY-CYS
Authors:Shimamoto, S, Hidaka, Y, Yoshino, S, Goto, M.
Deposit date:2022-12-14
Release date:2023-09-20
Method:SOLUTION NMR
Cite:The Molecular Basis of Heat-Stable Enterotoxin for Vaccine Development and Cancer Cell Detection.
Molecules, 28, 2023
1EI2
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BU of 1ei2 by Molmil
STRUCTURAL BASIS FOR RECOGNITION OF THE RNA MAJOR GROOVE IN THE TAU EXON 10 SPLICING REGULATORY ELEMENT BY AMINOGLYCOSIDE ANTIBIOTICS
Descriptor: NEOMYCIN, TAU EXON 10 SRE RNA
Authors:Varani, L, Spillantini, M.G, Goedert, M, Varani, G.
Deposit date:2000-02-23
Release date:2000-03-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis for recognition of the RNA major groove in the tau exon 10 splicing regulatory element by aminoglycoside antibiotics.
Nucleic Acids Res., 28, 2000
1EFE
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BU of 1efe by Molmil
AN ACTIVE MINI-PROINSULIN, M2PI
Descriptor: MINI-PROINSULIN
Authors:Cho, Y, Chang, S.G, Choi, K.D, Shin, H, Ahn, B, Kim, K.S.
Deposit date:2000-02-08
Release date:2000-03-17
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution Structure of an Active Mini-Proinsulin, M2PI: Inter-chain Flexibility is Crucial for Insulin Activity
J.Biochem.Mol.Biol., 33, 2000

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PDB entries from 2024-08-14

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