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3HP8
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BU of 3hp8 by Molmil
Crystal structure of a designed Cyanovirin-N homolog lectin; LKAMG, bound to sucrose
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Cyanovirin-N-like protein, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Koharudin, L.M.I, Furey, W, Gronenborn, A.M.
Deposit date:2009-06-03
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:A designed chimeric cyanovirin-N homolog lectin: Structure and molecular basis of sucrose binding.
Proteins, 77, 2009
6JXU
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BU of 6jxu by Molmil
SUMO1 bound to SLS4-SIM peptide from ICP0
Descriptor: Small ubiquitin-related modifier, viral protein
Authors:Hembram, D.S.S, Negi, H, Shet, D, Das, R.
Deposit date:2019-04-25
Release date:2020-02-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Viral SUMO-Targeted Ubiquitin Ligase ICP0 is Phosphorylated and Activated by Host Kinase Chk2.
J.Mol.Biol., 432, 2020
6JXW
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BU of 6jxw by Molmil
Complex of SUMO2 bound SLS4 from ICP0.
Descriptor: SLS4-SIM from Ubiquitin E3 ligase ICP0, Small ubiquitin-related modifier 2
Authors:Hembram, D.S.S, Negi, H, Shet, D, Das, R.
Deposit date:2019-04-25
Release date:2020-02-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Viral SUMO-Targeted Ubiquitin Ligase ICP0 is Phosphorylated and Activated by Host Kinase Chk2.
J.Mol.Biol., 432, 2020
6SDY
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BU of 6sdy by Molmil
Solution structure of Staufen1 dsRBD4 - hARF1 SBS dsRNA complex.
Descriptor: Double-stranded RNA-binding protein Staufen homolog 1, hARF1 SBS dsRNA
Authors:Yadav, D.K, Lukavsky, P.J.
Deposit date:2019-07-29
Release date:2020-01-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Staufen1 reads out structure and sequence features in ARF1 dsRNA for target recognition.
Nucleic Acids Res., 48, 2020
6SDW
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BU of 6sdw by Molmil
Solution structure of Staufen1 dsRBD3+4 - hARF1 SBS dsRNA complex.
Descriptor: Double-stranded RNA-binding protein Staufen homolog 1, hARF1 SBS dsRNA
Authors:Yadav, D.K, Lukavsky, P.J.
Deposit date:2019-07-29
Release date:2020-01-15
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Staufen1 reads out structure and sequence features in ARF1 dsRNA for target recognition.
Nucleic Acids Res., 48, 2020
5DO6
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BU of 5do6 by Molmil
Crystal structure of Dendroaspis polylepis venom mambalgin-1 T23A mutant
Descriptor: 1,2-ETHANEDIOL, IODIDE ION, Mambalgin-1, ...
Authors:Stura, E.A, Tepshi, L, Kessler, P, Gilles, M, Servent, D.
Deposit date:2015-09-10
Release date:2015-12-30
Last modified:2017-01-25
Method:X-RAY DIFFRACTION (1.697 Å)
Cite:Mambalgin-1 Pain-relieving Peptide, Stepwise Solid-phase Synthesis, Crystal Structure, and Functional Domain for Acid-sensing Ion Channel 1a Inhibition.
J.Biol.Chem., 291, 2016
5OEO
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BU of 5oeo by Molmil
Solution structure of the complex of TRPV5(655-725) with a Calmodulin E32Q/E68Q double mutant
Descriptor: CALCIUM ION, Calmodulin-1, Transient receptor potential cation channel subfamily V member 5
Authors:Vuister, G.W, Bokhovchuk, F.M, Bate, N, Kovalevskaya, N, Goult, B.T, Spronk, C.A.E.M.
Deposit date:2017-07-09
Release date:2018-04-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Structural Basis of Calcium-Dependent Inactivation of the Transient Receptor Potential Vanilloid 5 Channel.
Biochemistry, 57, 2018
1VEG
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BU of 1veg by Molmil
Solution Structure of RSGI RUH-012, a UBA Domain from Mouse cDNA
Descriptor: NEDD8 ultimate buster-1
Authors:Abe, T, Hirota, H, Izumi, K, Yoshida, M, Yamazaki, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-31
Release date:2004-09-30
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of RSGI RUH-012, a UBA Domain from Mouse cDNA
To be Published
5KES
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BU of 5kes by Molmil
Solution structure of the yeast Ddi1 HDD domain
Descriptor: DNA damage-inducible protein 1
Authors:Trempe, J.-F, Ratcliffe, C, Veverka, V, Saskova, K, Gehring, K.
Deposit date:2016-06-10
Release date:2016-10-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural studies of the yeast DNA damage-inducible protein Ddi1 reveal domain architecture of this eukaryotic protein family.
Sci Rep, 6, 2016
5JPW
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BU of 5jpw by Molmil
Molecular basis for protein recognition specificity of the DYNLT1/Tctex1 canonical binding groove. Characterization of the interaction with activin receptor IIB
Descriptor: Dynein light chain Tctex-type 1,Cytoplasmic dynein 1 intermediate chain 2
Authors:Rodriguez-Crespo, I, Merino-Gracia, J, Bruix, M, Zamora-Carreras, H.
Deposit date:2016-05-04
Release date:2016-08-17
Last modified:2024-07-03
Method:SOLUTION NMR
Cite:Molecular Basis for the Protein Recognition Specificity of the Dynein Light Chain DYNLT1/Tctex1: CHARACTERIZATION OF THE INTERACTION WITH ACTIVIN RECEPTOR IIB.
J.Biol.Chem., 291, 2016
8JB4
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BU of 8jb4 by Molmil
lipopolysaccharide-binding domain-LBDB
Descriptor: Antilipopolysaccharide factor D
Authors:Huang, J, Qin, Z.
Deposit date:2023-05-08
Release date:2024-03-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Machine learning and genetic algorithm-guided directed evolution for the development of small-molecule antibiotics originating from antimicrobial peptides
To Be Published
4GS9
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BU of 4gs9 by Molmil
Crystal structure of the high affinity heterodimer of HIF2 alpha and ARNT C-terminal PAS domains in complex with an inactive benzoxadiazole antagonist
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, Aryl hydrocarbon receptor nuclear translocator, Endothelial PAS domain-containing protein 1, ...
Authors:Scheuermann, T.H, Gardner, K.H.
Deposit date:2012-08-27
Release date:2013-04-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Development of Inhibitors of the PAS-B Domain of the HIF-2 alpha Transcription Factor
J.Med.Chem., 56, 2013
6PV0
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BU of 6pv0 by Molmil
Backbone-modified variant of zinc finger 2 from the transcription factor Sp1 DNA binding domain: D-Pro in the metal-binding turn
Descriptor: Transcription factor Sp1, ZINC ION
Authors:Rao, S.R, Horne, W.S.
Deposit date:2019-07-19
Release date:2020-06-24
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Proteomimetic Zinc Finger Domains with Modified Metal-binding beta-Turns.
Pept Sci (Hoboken), 112, 2020
7Y7L
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BU of 7y7l by Molmil
Solution structure of zinc finger domain 2 of human ZFAND1
Descriptor: AN1-type zinc finger protein 1, ZINC ION
Authors:Fang, P.J, Lai, C.H, Ko, K.T, Chang, C.F, Hsu, S.T.D.
Deposit date:2022-06-22
Release date:2023-06-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of p97 recognition by human ZFAND1
To Be Published
7YAB
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BU of 7yab by Molmil
Solution structure of zinc finger domain 1 of human ZFAND1
Descriptor: AN1-type zinc finger protein 1, ZINC ION
Authors:Fang, P.J, Lai, C.H, Ko, K.T, Chang, C.F, Hsu, S.T.D.
Deposit date:2022-06-27
Release date:2023-06-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of p97 recognition by human ZFAND1
To Be Published
7Y0I
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BU of 7y0i by Molmil
Solution structures of ASH1L PHD domain in complex with H3K4me2 peptide
Descriptor: ALA-ARG-THR-MLY-GLN-THR-ALA-ARG-LYS-SER-THR-GLY-GLY-LYS-ALA, Histone-lysine N-methyltransferase ASH1L, ZINC ION
Authors:Yu, M, Zeng, L.
Deposit date:2022-06-05
Release date:2022-10-12
Method:SOLUTION NMR
Cite:Structural insight into ASH1L PHD finger recognizing methylated histone H3K4 and promoting cell growth in prostate cancer.
Front Oncol, 12, 2022
8IS3
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BU of 8is3 by Molmil
Structural model for the micelle-bound indolicidin-like peptide in solution
Descriptor: Indolicidin-like antimicrobial peptide
Authors:Kim, B, Ko, Y.H, Kim, J, Lee, J, Nam, C.H, Kim, J.H.
Deposit date:2023-03-20
Release date:2024-03-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural model for the micelle-bound indolicidin-like peptide in solution
To Be Published
5TX8
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BU of 5tx8 by Molmil
Solution structure of the de novo mini protein gHH_44
Descriptor: HH2
Authors:Buchko, G.W, Bahl, C.D, Baker, D.
Deposit date:2016-11-15
Release date:2017-09-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Cytosolic expression, solution structures, and molecular dynamics simulation of genetically encodable disulfide-rich de novo designed peptides.
Protein Sci., 27, 2018
8BXJ
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BU of 8bxj by Molmil
apo structure of the specific silver chaperone needed for bacterial silver resistance
Descriptor: Copper ABC transporter substrate-binding protein
Authors:Monneau, Y.R, Walker, O, Hologne, M.
Deposit date:2022-12-08
Release date:2023-10-25
Method:SOLUTION NMR
Cite:The battle for silver binding: How the interplay between the SilE, SilF, and SilB proteins contributes to the silver efflux pump mechanism.
J.Biol.Chem., 299, 2023
7LGL
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BU of 7lgl by Molmil
Structural characterization of two b-KTx scorpion toxins. One of them blocks human KCNQ1 potassium channels
Descriptor: Potassium channel toxin TcoKIK
Authors:del Rio-Portilla, F, Lopez-Giraldo, A.E.
Deposit date:2021-01-20
Release date:2021-12-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:b-KTx scorpion toxin blocks human KCNQ1 potassium channels
To Be Published
7LI2
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BU of 7li2 by Molmil
Omega ester peptide pre-fuscimiditide
Descriptor: Pre-fuscimiditide peptide
Authors:Link, A.J, Elashal, H.E.
Deposit date:2021-01-26
Release date:2022-02-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Biosynthesis and characterization of fuscimiditide, an aspartimidylated graspetide.
Nat.Chem., 14, 2022
7LXC
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BU of 7lxc by Molmil
Structure and Interactions of DED1 of human cFLIP
Descriptor: DED1ch
Authors:Panaitiu, A.E, Basiashvili, T, Mierke, D.F, Pellegrini, M.
Deposit date:2021-03-03
Release date:2021-12-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An engineered construct of cFLIP provides insight into DED1 structure and interactions.
Structure, 30, 2022
7LIF
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BU of 7lif by Molmil
Aspartimidylated omega ester peptide fuscimiditide
Descriptor: Fuscimiditide peptide
Authors:Link, A.J, Elashal, H.E.
Deposit date:2021-01-27
Release date:2022-02-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Biosynthesis and characterization of fuscimiditide, an aspartimidylated graspetide.
Nat.Chem., 14, 2022
7LC8
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BU of 7lc8 by Molmil
SARS-CoV-2 spike Protein TM domain
Descriptor: Spike protein S2'
Authors:Fu, Q, Chou, J.J.
Deposit date:2021-01-10
Release date:2021-06-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Trimeric Hydrophobic Zipper Mediates the Intramembrane Assembly of SARS-CoV-2 Spike.
J.Am.Chem.Soc., 143, 2021
8C2Q
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BU of 8c2q by Molmil
Silver ion-bound structure of the silver specific chaperone SilF needed for bacterial silver resistance
Descriptor: Copper ABC transporter substrate-binding protein, SILVER ION
Authors:Monneau, Y.R, Walker, O, Hologne, M.
Deposit date:2022-12-22
Release date:2023-10-25
Method:SOLUTION NMR
Cite:The battle for silver binding: How the interplay between the SilE, SilF, and SilB proteins contributes to the silver efflux pump mechanism.
J.Biol.Chem., 299, 2023

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