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9BJL
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BU of 9bjl by Molmil
Crystal structure of Influenza D virus Nucleoprotein (Oklahoma)
Descriptor: CHLORIDE ION, Nucleoprotein
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2024-04-25
Release date:2024-05-08
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Crystal structure of Influenza D virus Nucleoprotein (Oklahoma)
To be published
8YRV
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BU of 8yrv by Molmil
Crystal structure of D-amino acid transaminase from Haliscomenobacter hydrossis complexed with 3-aminooxypropionic acid
Descriptor: 3-[(~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]oxypropanoic acid, Aminotransferase class IV, MAGNESIUM ION
Authors:Matyuta, I.O, Bakunova, A.K, Nikolaeva, A.Y, Popov, V.O, Boyko, K.M.
Deposit date:2024-03-21
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of D-amino acid transaminase from Haliscomenobacter hydrossis complexed with 3-aminooxypropionic acid
To Be Published
9EM1
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BU of 9em1 by Molmil
Human pyridoxal phosphatase in complex with 7,8-dihydroxyflavone and phosphate
Descriptor: 7,8-bis(oxidanyl)-2-phenyl-chromen-4-one, Chronophin, GLYCEROL, ...
Authors:Brenner, M, Gohla, A, Schindelin, H.
Deposit date:2024-03-07
Release date:2024-06-12
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:7,8-Dihydroxyflavone is a direct inhibitor of human and murine pyridoxal phosphatase.
Elife, 13, 2024
8XHO
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BU of 8xho by Molmil
Deep sea bacterial PET plastic hydrolase MtCut with mutation S178C
Descriptor: CALCIUM ION, PET plastic hydrolase
Authors:Yang, J.
Deposit date:2023-12-18
Release date:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Deep sea bacterial PET plastic hydrolase MtCut with mutation S178C
To Be Published
8W6Z
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BU of 8w6z by Molmil
Substrate-bound crystal structure of a P450 enzyme DmlH that catalyze intramolecular phenol coupling in the biosynthesis of cihanmycins
Descriptor: (E)-3-[2-[(2R,3S)-3-[(1R)-1-aminocarbonyloxypropyl]oxiran-2-yl]phenyl]prop-2-enoic acid, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Fang, C, Zhang, L, Zhu, Y, Zhang, C.
Deposit date:2023-08-30
Release date:2024-06-12
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate-bound crystal structure of a P450 enzyme DmlH that catalyze intramolecular phenol coupling in the biosynthesis of cihanmycins
To Be Published
9BKZ
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BU of 9bkz by Molmil
Crystal Structure of Dephospho-CoA kinase from Klebsiella aerogenes (CoA and ADP bound)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, COENZYME A, ...
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2024-04-29
Release date:2024-05-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal Structure of Dephospho-CoA kinase from Klebsiella aerogenes (CoA and ADP bound)
To be published
8W1E
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BU of 8w1e by Molmil
Crystal Structure of DPS-like protein PA4880 from Pseudomonas aeruginosa (dodecamer)
Descriptor: DPS-LIKE PROTEIN, FE (II) ION, SULFATE ION
Authors:Lovell, S, Liu, L, Seibold, S, Battaile, K.P, Rivera, M.
Deposit date:2024-02-15
Release date:2024-05-29
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Pseudomonas aeruginosa gene PA4880 encodes a Dps-like protein with a Dps fold, bacterioferritin-type ferroxidase centers, and endonuclease activity.
Front Mol Biosci, 11, 2024
9BCB
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BU of 9bcb by Molmil
Crystal structure of human cellular retinol binding protein 3 in complex with C11 TopFluor MG
Descriptor: 1-[11-(dipyrrometheneboron difluoride)undecanoyl]-rac-glycerol, GLYCEROL, Retinol-binding protein 5
Authors:Golczak, M.
Deposit date:2024-04-08
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Interactom of cellular retinol binding protein 3.
To Be Published
8WWR
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BU of 8wwr by Molmil
Crystal structure of apo human dishevelled 2 (Dvl2) PDZ domain
Descriptor: Segment polarity protein dishevelled homolog DVL-2
Authors:Omble, A, Mahajan, S, Kulkarni, K.A.
Deposit date:2023-10-26
Release date:2024-05-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Dishevelled2 activates WGEF via its interaction with a unique internal peptide motif of the GEF.
Commun Biol, 7, 2024
8YUA
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BU of 8yua by Molmil
Tubulin-RB3-TTL in complex with compound SI10
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-chloranyl-~{N}-(4-methoxyphenyl)-~{N}-methyl-thieno[3,2-d]pyrimidin-4-amine, CALCIUM ION, ...
Authors:Wu, C.Y, Wang, Y.X.
Deposit date:2024-03-27
Release date:2024-06-05
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:The complex structure of tubulin-RB3-TTL in complex with compound SI10
To Be Published
8YJ5
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BU of 8yj5 by Molmil
Characerization of a novel format scFvXVHH single-chain Biparatopic antibody against a metal binding protein, MtsA
Descriptor: Iron ABC transporter substrate-binding lipoprotein MtsA, VHH43
Authors:Ito, S, Nagatoishi, S, Nakakido, M, Tsumoto, K.
Deposit date:2024-03-01
Release date:2024-06-19
Method:X-RAY DIFFRACTION (3.66 Å)
Cite:Characterization of a novel format scFv×VHH single-chain biparatopic antibody against metal binding protein MtsA.
Protein Sci., 33, 2024
8UUB
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BU of 8uub by Molmil
Structure of hypothiocyanous acid reductase (Har) from Streptococcus pneumoniae
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, MALONATE ION, Oxidoreductase, ...
Authors:Shearer, H.L, Currie, M.J, Dickerhof, N, Dobson, R.C.J.
Deposit date:2023-10-31
Release date:2024-04-17
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Hypothiocyanous acid reductase is critical for host colonization and infection by Streptococcus pneumoniae.
J.Biol.Chem., 300, 2024
8WIU
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BU of 8wiu by Molmil
Bromodomain and Extra-terminal Domain (BET) BRD4
Descriptor: 7-[5-[1-(cyclopropylmethyl)-3,5-dimethyl-pyrazol-4-yl]pyridin-3-yl]-1~{H}-imidazo[4,5-b]pyridine, Isoform C of Bromodomain-containing protein 4
Authors:Cao, D, Zhiyan, D, Xiong, B.
Deposit date:2023-09-25
Release date:2024-01-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Discovery of a brain-permeable bromodomain and extra terminal domain (BET) inhibitor with selectivity for BD1 for the treatment of multiple sclerosis.
Eur.J.Med.Chem., 265, 2023
8VCC
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BU of 8vcc by Molmil
Crystal structure of H19 influenza A virus hemagglutinin from A/lesser scaup/California/3087/2010
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, hemagglutinin
Authors:Kottur, J, Aggarwal, A.K.
Deposit date:2023-12-14
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.383 Å)
Cite:H19 influenza A virus exhibits species-specific MHC class II receptor usage.
Cell Host Microbe, 2024
8VQ4
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BU of 8vq4 by Molmil
CDK2-CyclinE1 in complex with allosteric inhibitor I-125A.
Descriptor: (8R)-6-(1-benzyl-1H-pyrazole-4-carbonyl)-N-[(2S,3R)-3-(2-cyclohexylethoxy)-1-(methylamino)-1-oxobutan-2-yl]-2-[(1S)-2,2-dimethylcyclopropane-1-carbonyl]-2,6-diazaspiro[3.4]octane-8-carboxamide, Cyclin-dependent kinase 2, G1/S-specific cyclin-E1
Authors:Hirschi, M, Johnson, E, Zhang, Y, Liu, Z, Brodsky, O, Won, S.J, Nagata, A, Petroski, M.D, Majmudar, J.D, Niessen, S, VanArsdale, T, Gilbert, A.M, Hayward, M.M, Stewart, A.E, Nager, A.R, Melillo, B, Cravatt, B.
Deposit date:2024-01-17
Release date:2024-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Expanding the ligandable proteome by paralog hopping with covalent probes.
Biorxiv, 2024
9BC2
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BU of 9bc2 by Molmil
Transglutaminase 2 - Open State
Descriptor: CHLORIDE ION, HB-225 (gluten peptidomimetic TG2 inhibitor), Protein-glutamine gamma-glutamyltransferase 2, ...
Authors:Mathews, I.I, Sewa, A, Khosla, C.
Deposit date:2024-04-07
Release date:2024-07-03
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural and mechanistic analysis of Ca 2+ -dependent regulation of transglutaminase 2 activity using a Ca 2+ -bound intermediate state.
Proc.Natl.Acad.Sci.USA, 121, 2024
8WZD
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BU of 8wzd by Molmil
The Crystal Structure of PKCi from Biortus
Descriptor: Adenosine 5'-monophosphoramidase HINT1
Authors:Wang, F, Cheng, W, Lv, Z, Ju, C, Ni, C.
Deposit date:2023-11-01
Release date:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The Crystal Structure of PKCi from Biortus
To Be Published
8Z77
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BU of 8z77 by Molmil
The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum (pmTcDH), activated by crystals soaking with 1 mM CuCl2 and Na ascorbate during 12 hours
Descriptor: 1,2-ETHANEDIOL, COPPER (II) ION, Twin-arginine translocation signal domain-containing protein
Authors:Varfolomeeva, L.A, Solovieva, A.Y, Shipkov, N.S, Dergousova, N.I, Minyaev, M.E, Boyko, K.M, Tikhonova, T.V, Popov, V.O.
Deposit date:2024-04-19
Release date:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum (pmTcDH), activated by crystals soaking with 1 mM CuCl2 and Na ascorbate during 12 hours
To Be Published
8W0K
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BU of 8w0k by Molmil
Minimal PutA proline dehydrogenase domain (design #2) complexed with 1-hydroxyethane-1-sulfonate
Descriptor: (1R)-1-hydroxyethane-1-sulfonic acid, Bifunctional protein PutA fusion protein, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Tanner, J.J, Meeks, K.R.
Deposit date:2024-02-13
Release date:2024-07-03
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Screening a knowledge-based library of low molecular weight compounds against the proline biosynthetic enzyme 1-pyrroline-5-carboxylate 1 (PYCR1)
Protein Sci., 33, 2024
9B7F
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BU of 9b7f by Molmil
S_SAD structure of HEWL using lossless default compression
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Jakoncic, J, Bernstein, H.J, Soares, A.S, Horvat, K.
Deposit date:2024-03-27
Release date:2024-04-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Investigation of fast and efficient lossless compression algorithms for macromolecular crystallography experiments
To Be Published
8WUG
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BU of 8wug by Molmil
The Crystal Structure of JMJD2D from Biortus.
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Lysine-specific demethylase 4D, ...
Authors:Wang, F, Cheng, W, Yuan, Z, Lin, D, Guo, S.
Deposit date:2023-10-20
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Crystal Structure of JMJD2D from Biortus.
To Be Published
8TR4
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BU of 8tr4 by Molmil
Crystal Structure of Mtb Pks13 Thioesterase domain in complex with inhibitor X20404
Descriptor: 4-(2-{(4M)-4-[(6M)-6-(2,5-dimethoxyphenyl)pyridin-3-yl]-1H-1,2,3-triazol-1-yl}ethyl)-N,N-dimethylbenzamide, Polyketide synthase Pks13, SULFATE ION
Authors:Krieger, I.V, Sacchettini, J.C.
Deposit date:2023-08-09
Release date:2024-04-24
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Inhibitors of the Thioesterase Activity of Mycobacterium tuberculosis Pks13 Discovered Using DNA-Encoded Chemical Library Screening.
Acs Infect Dis., 10, 2024
8X15
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BU of 8x15 by Molmil
Structure of nucleosome-bound SRCAP-C in the apo state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
Authors:Yu, J, Wang, Q, Yu, Z, Li, W, Wang, L, Xu, Y.
Deposit date:2023-11-06
Release date:2024-03-06
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into histone exchange by human SRCAP complex.
Cell Discov, 10, 2024
8ZLV
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BU of 8zlv by Molmil
Asymmetric Dimeric Structure of the Catalytic Domain in Truncated Threonine Deaminase
Descriptor: L-threonine dehydratase biosynthetic IlvA
Authors:Khodi, S.
Deposit date:2024-05-21
Release date:2024-06-05
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Engineering Threonine Deaminase Catalytic Domain into a Tetrameric Configuration, Independent of Allosteric Regulation
To Be Published
8WTB
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BU of 8wtb by Molmil
Crystal structure of McsA/McsB complex truncated by chymotrypsin
Descriptor: Protein-arginine kinase, Protein-arginine kinase activator protein, ZINC ION
Authors:Arifuzzaman, M, Kwon, E, Kim, D.Y.
Deposit date:2023-10-18
Release date:2024-05-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural insights into the regulation of protein-arginine kinase McsB by McsA.
Proc.Natl.Acad.Sci.USA, 121, 2024

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PDB entries from 2024-07-17

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