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4Q0X
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BU of 4q0x by Molmil
Crystal structure of non-neutralizing antibody in complex with Epitope II of HCV E2
Descriptor: Envelope glycoprotein E2, mAb 12 heavy chain, mAb 12 light chain
Authors:Deng, L, Zhang, P.
Deposit date:2014-04-02
Release date:2014-07-09
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Discrete conformations of epitope II on the hepatitis C virus E2 protein for antibody-mediated neutralization and nonneutralization.
Proc.Natl.Acad.Sci.USA, 111, 2014
8XMN
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BU of 8xmn by Molmil
Voltage-gated sodium channel Nav1.7 variant M2
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, N, Li, Z, Wu, Q, Huang, G.
Deposit date:2023-12-27
Release date:2024-03-06
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Dissection of the structure-function relationship of Na v channels.
Proc.Natl.Acad.Sci.USA, 121, 2024
8XMO
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BU of 8xmo by Molmil
Voltage-gated sodium channel Nav1.7 variant M4
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, N, Li, Z, Wu, Q, Huang, G.
Deposit date:2023-12-27
Release date:2024-03-06
Last modified:2024-11-27
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Dissection of the structure-function relationship of Na v channels.
Proc.Natl.Acad.Sci.USA, 121, 2024
8XMM
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BU of 8xmm by Molmil
Voltage-gated sodium channel Nav1.7 variant M9
Descriptor: (2S,3R,4E)-2-(acetylamino)-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
Authors:Yan, N, Li, Z, Wu, Q, Huang, G.
Deposit date:2023-12-27
Release date:2024-03-06
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Dissection of the structure-function relationship of Na v channels.
Proc.Natl.Acad.Sci.USA, 121, 2024
4QHL
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BU of 4qhl by Molmil
I3.2 (unbound) from CH103 Lineage
Descriptor: I3 heavy chain, UCA light chain
Authors:Fera, D, Harrison, S.C.
Deposit date:2014-05-28
Release date:2014-06-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.153 Å)
Cite:Affinity maturation in an HIV broadly neutralizing B-cell lineage through reorientation of variable domains.
Proc.Natl.Acad.Sci.USA, 111, 2014
4QHN
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BU of 4qhn by Molmil
I2 (unbound) from CH103 Lineage
Descriptor: I2 heavy chain, I2 light chain
Authors:Fera, D, Harrison, S.C.
Deposit date:2014-05-28
Release date:2014-06-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Affinity maturation in an HIV broadly neutralizing B-cell lineage through reorientation of variable domains.
Proc.Natl.Acad.Sci.USA, 111, 2014
4QHM
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BU of 4qhm by Molmil
I3.1 (unbound) from CH103 Lineage
Descriptor: I2 light chain, I3 heavy chain
Authors:Fera, D, Harrison, S.C.
Deposit date:2014-05-28
Release date:2014-06-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.23 Å)
Cite:Affinity maturation in an HIV broadly neutralizing B-cell lineage through reorientation of variable domains.
Proc.Natl.Acad.Sci.USA, 111, 2014
8XT9
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BU of 8xt9 by Molmil
structure of LGR4
Descriptor: Leucine-rich repeat-containing G-protein coupled receptor 4, MB52
Authors:Wang, L, Geng, Y.
Deposit date:2024-01-10
Release date:2025-01-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:structure of LGR4
To Be Published
4R26
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BU of 4r26 by Molmil
Crystal structure of human Fab PGT124, a broadly neutralizing and potent HIV-1 neutralizing antibody
Descriptor: GLYCEROL, PGR124-Light Chain, PGT124-Heavy Chain
Authors:Garces, F, Kong, L, Wilson, I.A.
Deposit date:2014-08-08
Release date:2014-10-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.4969 Å)
Cite:Structural Evolution of Glycan Recognition by a Family of Potent HIV Antibodies.
Cell(Cambridge,Mass.), 159, 2014
4R2G
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BU of 4r2g by Molmil
Crystal Structure of PGT124 Fab bound to HIV-1 JRCSF gp120 core and to CD4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Garces, F, Wilson, I.A.
Deposit date:2014-08-11
Release date:2014-10-08
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (3.283 Å)
Cite:Structural Evolution of Glycan Recognition by a Family of Potent HIV Antibodies.
Cell(Cambridge,Mass.), 159, 2014
4P2C
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BU of 4p2c by Molmil
Complex of Shiga toxin 2e with a neutralizing single-domain antibody
Descriptor: Nanobody 1, Anti-F4+ETEC bacteria VHH variable region, Shiga toxin 2e, ...
Authors:Lo, A.W.H, Moonens, K, De Kerpel, M, Brys, L, Pardon, E, Remaut, H, De Greve, H.
Deposit date:2014-03-03
Release date:2014-07-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.818 Å)
Cite:The Molecular Mechanism of Shiga Toxin Stx2e Neutralization by a Single-domain Antibody Targeting the Cell Receptor-binding Domain.
J.Biol.Chem., 289, 2014
8YC0
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BU of 8yc0 by Molmil
T cell receptor V delta2 V gamma9 in GDN
Descriptor: CHOLESTEROL, T cell receptor delta variable 2,T cell receptor delta constant, T cell receptor gamma variable 9,T cell receptor gamma constant 1, ...
Authors:Xin, W, Huang, B, Chi, X, Xu, M, Zhang, Y, Li, X, Su, Q, Zhou, Q.
Deposit date:2024-02-17
Release date:2024-05-08
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (4.12 Å)
Cite:Structures of human gamma delta T cell receptor-CD3 complex.
Nature, 630, 2024
4PD4
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BU of 4pd4 by Molmil
Structural analysis of atovaquone-inhibited cytochrome bc1 complex reveals the molecular basis of antimalarial drug action
Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-[trans-4-(4-chlorophenyl)cyclohexyl]-3-hydroxynaphthalene-1,4-dione, ...
Authors:Birth, D, Kao, W.-C, Hunte, C.
Deposit date:2014-04-17
Release date:2014-06-11
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:Structural analysis of atovaquone-inhibited cytochrome bc1 complex reveals the molecular basis of antimalarial drug action.
Nat Commun, 5, 2014
4P3D
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BU of 4p3d by Molmil
MT1-MMP:Fab complex (Form II)
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Rozenberg, H, Udi, Y, Sagi, I.
Deposit date:2014-03-07
Release date:2014-12-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.949 Å)
Cite:Inhibition mechanism of membrane metalloprotease by an exosite-swiveling conformational antibody.
Structure, 23, 2015
4PB0
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BU of 4pb0 by Molmil
Structure of the Fab fragment of the anti-Francisella tularensis GroEL antibody Ab53
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Ab53 heavy chain, Ab53 light chain, ...
Authors:Lu, Z, Rynkiewicz, M.J, Seaton, B.A, Sharon, J.
Deposit date:2014-04-10
Release date:2014-07-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:B-Cell Epitopes in GroEL of Francisella tularensis.
Plos One, 9, 2014
4PUB
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BU of 4pub by Molmil
Crystal structure of Fab DX-2930
Descriptor: CHLORIDE ION, DX-2930 HEAVY CHAIN, DX-2930 LIGHT CHAIN
Authors:Abendroth, J, Edwards, T.E, Nixon, A, Ladner, R.
Deposit date:2014-03-12
Release date:2014-07-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Inhibition of plasma kallikrein by a highly specific active site blocking antibody.
J.Biol.Chem., 289, 2014
8YJ3
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BU of 8yj3 by Molmil
N17.1.2 recognition of NRAS neoantigens
Descriptor: tcr alpha, tcr beta
Authors:Wu, D.C, Mariuzza, R.A.
Deposit date:2024-02-29
Release date:2024-12-04
Method:X-RAY DIFFRACTION (3.503 Å)
Cite:Structural characterization and AlphaFold modeling of human T cell receptor recognition of NRAS cancer neoantigens.
Sci Adv, 10, 2024
8ZA6
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BU of 8za6 by Molmil
Cryo-EM structure of the gdTCR-CD3 complex
Descriptor: CD3, CHOLESTEROL, T-cell surface glycoprotein CD3 delta chain, ...
Authors:Bai, Y, Zhu, Y, Huang, Z.
Deposit date:2024-04-24
Release date:2025-04-30
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:Cryo-EM structure of the gdTCR-CD3 complex
To Be Published
8ZA9
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BU of 8za9 by Molmil
Cryo-EM structure of HBMBPP-BTN2A1-BTN3A1 complex
Descriptor: (2E)-4-hydroxy-3-methylbut-2-en-1-yl trihydrogen diphosphate, Butyrophilin subfamily 2 member A1, Butyrophilin subfamily 3 member A1
Authors:Zheng, J, Gao, W, Zhu, Y, Huang, Z.
Deposit date:2024-04-24
Release date:2025-04-30
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of HBMBPP-BTN2A1-BTN3A1 complex
To Be Published
8Y6X
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BU of 8y6x by Molmil
Crystal structure of ternary complex of human MR1, ligand #4, and MAIT-TCR A-F7
Descriptor: 5-(2-oxidanylidenepropyl)-8-[(2~{S},3~{S},4~{R})-2,3,4,5-tetrakis(oxidanyl)pentyl]-1,7-dihydropteridine-2,4,6-trione, Beta-2-microglobulin, MAIT T cell receptor (A-F7) alpha chain, ...
Authors:Nagae, M, Inuki, S, Yamasaki, S.
Deposit date:2024-02-03
Release date:2024-10-30
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Development of Ribityllumazine Analogue as Mucosal-Associated Invariant T Cell Ligands.
J.Am.Chem.Soc., 146, 2024
4TQE
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BU of 4tqe by Molmil
Structure of tau peptide in complex with Tau5 antibody Fab fragment
Descriptor: Fab heavy chain, If kappa light chain, Microtubule-associated protein tau, ...
Authors:Cehlar, O, Skrabana, R, Novak, M.
Deposit date:2014-06-11
Release date:2015-07-29
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of tau peptide in complex with Tau5 antibody Fab fragment
To Be Published
8YJ2
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BU of 8yj2 by Molmil
N17.1.2 recognition of NRAS neoantigens
Descriptor: Beta-2-microglobulin, ILE-LEU-ASP-THR-ALA-GLY-ARG-GLU-GLU-TYR, human leukocyte antigen, ...
Authors:Wu, D.C, Mariuzza, R.A.
Deposit date:2024-02-29
Release date:2024-12-04
Method:X-RAY DIFFRACTION (2.261 Å)
Cite:Structural characterization and AlphaFold modeling of human T cell receptor recognition of NRAS cancer neoantigens.
Sci Adv, 10, 2024
8YIV
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BU of 8yiv by Molmil
N17.1.2 recognition of NRAS neoantigens
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
Authors:Wu, D.C, Mariuzza, R.A.
Deposit date:2024-02-29
Release date:2024-12-04
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Structural characterization and AlphaFold modeling of human T cell receptor recognition of NRAS cancer neoantigens.
Sci Adv, 10, 2024
4OZG
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BU of 4ozg by Molmil
D2 protein complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Petersen, J, Reid, H.H, Rossjohn, J.
Deposit date:2014-02-16
Release date:2014-04-16
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:T-cell receptor recognition of HLA-DQ2-gliadin complexes associated with celiac disease.
Nat.Struct.Mol.Biol., 21, 2014
8ZDW
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BU of 8zdw by Molmil
The cryoEM structure of H5N1 HA split from symmetric filament in conformation A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Anti-H5N1 hemagglutinin monoclonal anitbody H5M9 heavy chain, ...
Authors:Li, R, Gao, J, Wang, L, Gui, M, Xiang, Y.
Deposit date:2024-05-03
Release date:2024-09-25
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Multivalent interactions between fully glycosylated influenza virus hemagglutinins mediated by glycans at distinct N-glycosylation sites.
Npj Viruses, 2, 2024

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PDB entries from 2025-07-09

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