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5S4E
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BU of 5s4e by Molmil
PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 Nsp3 macrodomain in complex with Z2301685688
Descriptor: 1H-imidazole-5-carbonitrile, DIMETHYL SULFOXIDE, Non-structural protein 3
Authors:Fearon, D, Schuller, M, Rangel, V.L, Douangamath, A, Rack, J.G.M, Zhu, K, Aimon, A, Brandao-Neto, J, Dias, A, Dunnet, L, Gorrie-Stone, T.J, Powell, A.J, Krojer, T, Skyner, R, Thompson, W, Ahel, I, von Delft, F.
Deposit date:2020-11-02
Release date:2021-01-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking.
Sci Adv, 7, 2021
4GUA
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BU of 4gua by Molmil
Alphavirus P23pro-zbd
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Non-structural polyprotein, SULFATE ION, ...
Authors:Shin, G, Yost, S, Miller, M, Marcotrigiano, J.
Deposit date:2012-08-29
Release date:2012-10-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.854 Å)
Cite:Structural and functional insights into alphavirus polyprotein processing and pathogenesis.
Proc.Natl.Acad.Sci.USA, 109, 2012
6LN0
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BU of 6ln0 by Molmil
Crystal structure of three main domains of nonstructural protein 3 from Coronavirus
Descriptor: Non-structural protein 3, ZINC ION
Authors:Li, M.X, Peng, G.Q.
Deposit date:2019-12-27
Release date:2021-05-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.455 Å)
Cite:Structure of the multiple functional domains from coronavirus nonstructural protein 3.
Emerg Microbes Infect, 10, 2021
7OMU
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BU of 7omu by Molmil
Thermosipho africanus DarTG in complex with ADP-ribose
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Macro domain-containing protein
Authors:Ariza, A.
Deposit date:2021-05-24
Release date:2021-06-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Molecular basis for DarT ADP-ribosylation of a DNA base.
Nature, 596, 2021
8YB7
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BU of 8yb7 by Molmil
SARS-CoV-2 DMV nsp3-4 pore complex (consensus-pore, C3 symmetry)
Descriptor: Non-structural protein 4, Papain-like protease nsp3
Authors:Huang, Y.X, Zhong, L.J, Zhang, W.X, Ni, T.
Deposit date:2024-02-12
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Molecular Architecture of Coronavirus Double Membrane Vesicle Pore Complex
To Be Published
8YAX
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BU of 8yax by Molmil
SARS-CoV-2 DMV nsp3-4 pore complex (full-pore)
Descriptor: Non-structural protein 4, Papain-like protease nsp3
Authors:Huang, Y.X, Zhong, L.J, Zhang, W.X, Ni, T.
Deposit date:2024-02-10
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Molecular Architecture of Coronavirus Double Membrane Vesicle Pore Complex
To Be Published
8YB5
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BU of 8yb5 by Molmil
SARS-CoV-2 DMV nsp3-4 pore complex (consensus-pore, C6 symmetry)
Descriptor: Non-structural protein 4, Papain-like protease nsp3
Authors:Huang, Y.X, Zhong, L.J, Zhang, W.X, Ni, T.
Deposit date:2024-02-11
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Molecular Architecture of Coronavirus Double Membrane Vesicle Pore Complex
To Be Published
7WR6
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BU of 7wr6 by Molmil
Crystal structure of ADP-riboxanated caspase-4 in complex with Af1521
Descriptor: ADP-ribose glycohydrolase AF_1521, Caspase-4, [[(3~{a}~{S},5~{R},6~{R},6~{a}~{R})-2-azanylidene-3-[(4~{R})-4-azanyl-5-oxidanylidene-pentyl]-6-oxidanyl-3~{a},5,6,6~{a}-tetrahydrofuro[2,3-d][1,3]oxazol-5-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Authors:Hou, Y.J, Zeng, H, Shao, F, Ding, J.
Deposit date:2022-01-26
Release date:2023-01-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural mechanisms of calmodulin activation of Shigella effector OspC3 to ADP-riboxanate caspase-4/11 and block pyroptosis.
Nat.Struct.Mol.Biol., 30, 2023
7D3Y
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BU of 7d3y by Molmil
Crystal structure of the osPHR2-osSPX2 complex
Descriptor: INOSITOL HEXAKISPHOSPHATE, Protein PHOSPHATE STARVATION RESPONSE 2, SPX domain-containing protein 2,Isoform 1 of Core histone macro-H2A.1
Authors:Zhang, Q.X, Guan, Z.Y, Zuo, J.Q, Zhang, Z.F, Liu, Z.
Deposit date:2020-09-21
Release date:2021-10-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Mechanistic insights into the regulation of plant phosphate homeostasis by the rice SPX2 - PHR2 complex.
Nat Commun, 13, 2022
6Y4Y
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BU of 6y4y by Molmil
The crystal structure of human MACROD2 in space group P41212
Descriptor: L(+)-TARTARIC ACID, Thioredoxin 1,ADP-ribose glycohydrolase MACROD2
Authors:Wazir, S, Maksimainen, M.M, Lehtio, L.
Deposit date:2020-02-24
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Multiple crystal forms of human MacroD2.
Acta Crystallogr.,Sect.F, 76, 2020
6Y4Z
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BU of 6y4z by Molmil
The crystal structure of human MACROD2 in space group P43212
Descriptor: L(+)-TARTARIC ACID, Thioredoxin 1,ADP-ribose glycohydrolase MACROD2
Authors:Wazir, S, Maksimainen, M.M, Lehtio, L.
Deposit date:2020-02-24
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Multiple crystal forms of human MacroD2.
Acta Crystallogr.,Sect.F, 76, 2020

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PDB entries from 2024-07-17

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