Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1RM1
DownloadVisualize
BU of 1rm1 by Molmil
Structure of a Yeast TFIIA/TBP/TATA-box DNA Complex
Descriptor: 5'-D(*AP*TP*CP*GP*AP*TP*CP*GP*AP*TP*AP*TP*AP*AP*AP*AP*CP*G)-3', 5'-D(P*CP*GP*TP*TP*TP*TP*AP*TP*AP*TP*CP*GP*AP*TP*CP*GP*AP*T)-3', TATA-box binding protein, ...
Authors:Jin, X, Gewirth, D.T, Geiger, J.H.
Deposit date:2003-11-26
Release date:2005-07-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:High Resolution Structure of a Yeast TFIIA/TBP/TATA-box DNA Complex
TO BE PUBLISHED
7Z8S
DownloadVisualize
BU of 7z8s by Molmil
Mot1:TBP:DNA - post hydrolysis state
Descriptor: DNA (36-MER), Helicase-like protein, Putative tata-box binding protein
Authors:Woike, S, Eustermann, S, Jung, J, Wenzl, S.J, Hagemann, G, Bartho, J.D, Lammens, K, Butryn, A, Herzog, F, Hopfner, K.-P.
Deposit date:2022-03-18
Release date:2023-03-29
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis for TBP displacement from TATA box DNA by the Swi2/Snf2 ATPase Mot1.
Nat.Struct.Mol.Biol., 30, 2023
7Z7N
DownloadVisualize
BU of 7z7n by Molmil
Mot1E1434Q:TBP:DNA - substrate recognition state
Descriptor: DNA (36-MER), Helicase-like protein, Putative tata-box binding protein
Authors:Woike, S, Eustermann, S, Jung, J, Wenzl, S.J, Hagemann, G, Bartho, J.D, Lammens, K, Butryn, A, Herzog, F, Hopfner, K.-P.
Deposit date:2022-03-16
Release date:2023-03-29
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Structural basis for TBP displacement from TATA box DNA by the Swi2/Snf2 ATPase Mot1.
Nat.Struct.Mol.Biol., 30, 2023
7ZB5
DownloadVisualize
BU of 7zb5 by Molmil
Mot1(1-1836):TBP:DNA - post-hydrolysis complex dimer
Descriptor: DNA (36-MER), Helicase-like protein, Putative tata-box binding protein
Authors:Woike, S, Eustermann, S, Jung, J, Wenzl, S.J, Hagemann, G, Bartho, J.D, Lammens, K, Butryn, A, Herzog, F, Hopfner, K.-P.
Deposit date:2022-03-23
Release date:2023-04-05
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis for TBP displacement from TATA box DNA by the Swi2/Snf2 ATPase Mot1.
Nat.Struct.Mol.Biol., 30, 2023
7ZKE
DownloadVisualize
BU of 7zke by Molmil
Mot1:TBP:DNA - pre-hydrolysis state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA (36-MER), ...
Authors:Woike, S, Eustermann, S, Jung, J, Wenzl, S.J, Hagemann, G, Bartho, J.D, Lammens, K, Butryn, A, Herzog, F, Hopfner, K.-P.
Deposit date:2022-04-12
Release date:2023-04-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis for TBP displacement from TATA box DNA by the Swi2/Snf2 ATPase Mot1.
Nat.Struct.Mol.Biol., 30, 2023
1VTO
DownloadVisualize
BU of 1vto by Molmil
1.9 A RESOLUTION REFINED STRUCTURE OF TBP RECOGNIZING THE MINOR GROOVE OF TATAAAAG
Descriptor: DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*C)-3'), TATA BINDING PROTEIN
Authors:Kim, J.L, Burley, S.K.
Deposit date:1996-09-06
Release date:2011-07-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:1.9 A Resolution Refined Structure of TBP Recognizing the Minor Groove of TATAAAAG
Nat.Struct.Biol., 1, 1994
3PQU
DownloadVisualize
BU of 3pqu by Molmil
The crystal structures of porcine pathogen AsH57_TbpB
Descriptor: GLYCEROL, Transferrin binding protein B
Authors:Calmettes, C, Moraes, T.F.
Deposit date:2010-11-26
Release date:2011-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Variations within the Transferrin Binding Site on Transferrin-binding Protein B, TbpB.
J.Biol.Chem., 286, 2011
3PQS
DownloadVisualize
BU of 3pqs by Molmil
The crystal structures of porcine pathogen ApH87_TbpB
Descriptor: CACODYLATE ION, GLYCEROL, transferrin-binding protein
Authors:Calmettes, C, Moraes, T.F.
Deposit date:2010-11-26
Release date:2011-02-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Variations within the Transferrin Binding Site on Transferrin-binding Protein B, TbpB.
J.Biol.Chem., 286, 2011
2HU2
DownloadVisualize
BU of 2hu2 by Molmil
CTBP/BARS in ternary complex with NAD(H) and RRTGAPPAL peptide
Descriptor: 9-mer peptide from Zinc finger protein 217, C-terminal-binding protein 1, FORMIC ACID, ...
Authors:Nardini, M, Bolognesi, M, Quinlan, K.G.R, Verger, A, Francescato, P, Crossley, M.
Deposit date:2006-07-26
Release date:2006-10-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Specific Recognition of ZNF217 and Other Zinc Finger Proteins at a Surface Groove of C-Terminal Binding Proteins
Mol.Cell.Biol., 26, 2006
2LJ4
DownloadVisualize
BU of 2lj4 by Molmil
Solution structure of the TbPIN1
Descriptor: Peptidyl-prolyl cis-trans isomerase/rotamase, putative
Authors:Sun, L, Lin, D, Zhao, Y.
Deposit date:2011-09-06
Release date:2012-08-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structural analysis of the single-domain parvulin TbPin1.
Plos One, 7, 2012
3M4U
DownloadVisualize
BU of 3m4u by Molmil
Crystal Structure of Trypanosoma brucei Protein Tyrosine Phosphatase TbPTP1
Descriptor: PHOSPHATE ION, Tyrosine specific protein phosphatase, putative
Authors:Chou, S, Alber, T, Grundner, C.
Deposit date:2010-03-12
Release date:2010-05-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.392 Å)
Cite:The Trypanosoma brucei life cycle switch TbPTP1 is structurally conserved and dephosphorylates the nucleolar protein NOPP44/46.
J.Biol.Chem., 285, 2010
5AIN
DownloadVisualize
BU of 5ain by Molmil
Varenicline Interactions at the 5HT3 Receptor Ligand Binding Site are Revealed by 5HTBP
Descriptor: SOLUBLE ACETYLCHOLINE RECEPTOR, VARENICLINE
Authors:Price, K.L, Lillestol, R, Ulens, C, Lummis, S.C.
Deposit date:2015-02-16
Release date:2015-03-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Varenicline Interactions at the 5-Ht3 Receptor Ligand Binding Site are Revealed by 5-Htbp.
Acs Chem Neurosci, 6, 2015
2JM3
DownloadVisualize
BU of 2jm3 by Molmil
Solution structure of the THAP domain from C. elegans C-terminal binding protein (CtBP)
Descriptor: Hypothetical protein, ZINC ION
Authors:Liew, C.K, Crossley, M, Mackay, J.P, Nicholas, H.R.
Deposit date:2006-09-21
Release date:2007-02-06
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the THAP domain from Caenorhabditis elegans C-terminal binding protein (CtBP).
J.Mol.Biol., 366, 2007
1TBP
DownloadVisualize
BU of 1tbp by Molmil
CRYSTAL STRUCTURE OF YEAST TATA-BINDING PROTEIN AND MODEL FOR INTERACTION WITH DNA
Descriptor: TATA-BINDING PROTEIN
Authors:Chasman, D.I, Flaherty, K.M, Sharp, P.A, Kornberg, R.D.
Deposit date:1993-08-02
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of yeast TATA-binding protein and model for interaction with DNA.
Proc.Natl.Acad.Sci.USA, 90, 1993
8FFZ
DownloadVisualize
BU of 8ffz by Molmil
TFIIIA-TFIIIC-Brf1-TBP complex bound to 5S rRNA gene
Descriptor: DNA (151-MER), Transcription factor IIIA, Transcription factor IIIB 70 kDa subunit,TATA-box-binding protein, ...
Authors:Talyzina, A, He, Y.
Deposit date:2022-12-11
Release date:2023-06-21
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis of TFIIIC-dependent RNA polymerase III transcription initiation.
Mol.Cell, 83, 2023
1MP9
DownloadVisualize
BU of 1mp9 by Molmil
TBP from a mesothermophilic archaeon, Sulfolobus acidocaldarius
Descriptor: TATA-binding protein
Authors:Koike, H, Kawashima-Ohya, Y, Yamasaki, T, Clowney, L, Katsuya, Y, Suzuki, M.
Deposit date:2002-09-12
Release date:2003-11-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Origins of Protein Stability Revealed by Comparing Crystal Structures of TATA Binding Proteins.
Structure, 12, 2004
3HOL
DownloadVisualize
BU of 3hol by Molmil
The Structure of Intact Ap-TbpB (N and C lobes)
Descriptor: TbpB
Authors:Moraes, T.F, Yu, R.H, Schryvers, A.B, Strynadka, N.C.J.
Deposit date:2009-06-02
Release date:2009-10-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Insights into the bacterial transferrin receptor: the structure of transferrin-binding protein B from Actinobacillus pleuropneumoniae.
Mol.Cell, 35, 2009
1NGM
DownloadVisualize
BU of 1ngm by Molmil
Crystal structure of a yeast Brf1-TBP-DNA ternary complex
Descriptor: 5'-D(*AP*AP*AP*AP*AP*AP*CP*AP*TP*TP*TP*TP*TP*TP*TP*AP*TP*AP*G)-3', 5'-D(*CP*TP*AP*TP*AP*AP*AP*AP*AP*AP*AP*TP*GP*TP*TP*TP*TP*TP*T)-3', Transcription factor IIIB BRF1 subunit, ...
Authors:Juo, Z.S, Kassavetis, G.A, Wang, J, Geiduschek, E.P, Sigler, P.B.
Deposit date:2002-12-17
Release date:2003-03-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structure of a transcription factor IIIB core interface ternary complex
Nature, 422, 2003
7OHC
DownloadVisualize
BU of 7ohc by Molmil
Cryo-EM structure of nucleosome core particle composed of the Widom 601 DNA sequence
Descriptor: DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Wang, H, Cramer, P.
Deposit date:2021-05-10
Release date:2021-07-28
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structures and implications of TBP-nucleosome complexes.
Proc.Natl.Acad.Sci.USA, 118, 2021
2Z8U
DownloadVisualize
BU of 2z8u by Molmil
Methanococcus jannaschii TBP
Descriptor: TATA-box-binding protein
Authors:Adachi, N, Senda, T, Horikoshi, M.
Deposit date:2007-09-10
Release date:2008-08-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Methanococcus jannaschii TATA box-binding protein.
Genes Cells, 13, 2008
6MZC
DownloadVisualize
BU of 6mzc by Molmil
Human TFIID BC core
Descriptor: Transcription initiation factor TFIID subunit 10, Transcription initiation factor TFIID subunit 12, Transcription initiation factor TFIID subunit 2, ...
Authors:Patel, A.B, Louder, R.K, Greber, B.J, Grunberg, S, Luo, J, Fang, J, Liu, Y, Ranish, J, Hahn, S, Nogales, E.
Deposit date:2018-11-05
Release date:2018-11-28
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structure of human TFIID and mechanism of TBP loading onto promoter DNA.
Science, 362, 2018
7EGD
DownloadVisualize
BU of 7egd by Molmil
SCP promoter-bound TFIID-TFIIA in initial TBP-loading state
Descriptor: DNA (72-MER), TATA-box-binding protein, Transcription initiation factor IIA subunit 1, ...
Authors:Chen, X, Wu, Z, Li, J, Zhao, D, Xu, Y.
Deposit date:2021-03-24
Release date:2021-05-12
Method:ELECTRON MICROSCOPY (6.75 Å)
Cite:Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021
7EGJ
DownloadVisualize
BU of 7egj by Molmil
SCP promoter-bound TFIID-TFIIA in post TBP-loading state
Descriptor: DNA (74-MER), TATA-box-binding protein, Transcription initiation factor IIA subunit 1, ...
Authors:Chen, X, Wu, Z, Li, J, Zhao, D, Xu, Y.
Deposit date:2021-03-24
Release date:2021-05-12
Method:ELECTRON MICROSCOPY (8.64 Å)
Cite:Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021
5M4S
DownloadVisualize
BU of 5m4s by Molmil
Transcription factor TFIIA as a single chain protein
Descriptor: Transcription initiation factor IIA subunit 2,Transcription initiation factor IIA subunit 1,Transcription initiation factor IIA subunit 1
Authors:Kandiah, E, Gupta, K.
Deposit date:2016-10-19
Release date:2017-11-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Architecture of TAF11/TAF13/TBP complex suggests novel regulation properties of general transcription factor TFIID.
Elife, 6, 2017
5N9G
DownloadVisualize
BU of 5n9g by Molmil
TFIIIB -TBP/Brf2/DNA and SANT domain of Bdp1-
Descriptor: DNA/RNA (25-MER), DNA/RNA (27-MER), SODIUM ION, ...
Authors:Gouge, J, Vannini, A, Guthertz, N.
Deposit date:2017-02-24
Release date:2017-06-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular mechanisms of Bdp1 in TFIIIB assembly and RNA polymerase III transcription initiation.
Nat Commun, 8, 2017

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon