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8ELC
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BU of 8elc by Molmil
Human JNK2 bound to covalent inhibitor YL2056
Descriptor: 4-(dimethylamino)-N-{4-[(3S)-3-({4-[(8R)-2-phenylpyrazolo[1,5-a]pyridin-3-yl]pyrimidin-2-yl}amino)pyrrolidine-1-carbonyl]phenyl}butanamide, Mitogen-activated protein kinase 9
Authors:Li, L, Gurbani, D, Westover, K.D.
Deposit date:2022-09-23
Release date:2023-06-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.072 Å)
Cite:Development of a Covalent Inhibitor of c-Jun N-Terminal Protein Kinase (JNK) 2/3 with Selectivity over JNK1.
J.Med.Chem., 66, 2023
8GI3
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BU of 8gi3 by Molmil
Crystal structure of RhoA mutant L69P complexed with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transforming protein RhoA
Authors:Chen, X, Qian, X, Chandravanshi, M, Lowy, D.R, Walters, K.J.
Deposit date:2023-03-13
Release date:2024-03-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Ras-like GTPases mutants structure
To be published
4QJ2
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BU of 4qj2 by Molmil
Crystal structure of inactive HIV-1 protease variant (I50V/A71V) in complex with WT p1-p6 substrate
Descriptor: GLYCEROL, PHOSPHATE ION, Protease, ...
Authors:Lin, K.H, Schiffer, C.A.
Deposit date:2014-06-03
Release date:2014-10-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structural basis and distal effects of Gag substrate coevolution in drug resistance to HIV-1 protease.
Proc.Natl.Acad.Sci.USA, 111, 2014
5D40
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BU of 5d40 by Molmil
Crystal structure of the 5-selective H176Y mutant of Cytochrome TxtE
Descriptor: CHLORIDE ION, GLYCEROL, P450-like protein, ...
Authors:Cahn, J.K.B, Dodani, S.C, Arnold, F.H.
Deposit date:2015-08-06
Release date:2016-06-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Discovery of a regioselectivity switch in nitrating P450s guided by molecular dynamics simulations and Markov models.
Nat.Chem., 8, 2016
4ZFX
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BU of 4zfx by Molmil
Siderocalin-mediated recognition and cellular uptake of actinides
Descriptor: N,N',N''-[(3S,7S,11S)-2,6,10-trioxo-1,5,9-trioxacyclododecane-3,7,11-triyl]tris(2,3-dihydroxybenzamide), Neutrophil gelatinase-associated lipocalin, SULFATE ION, ...
Authors:Allred, B.E, Rupert, P.B, Gauny, S.S, An, D.D, Ralston, C.Y, Sturzbecher-Hoehne, M, Strong, R.K, Abergel, R.J.
Deposit date:2015-04-22
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Siderocalin-mediated recognition, sensitization, and cellular uptake of actinides.
Proc.Natl.Acad.Sci.USA, 112, 2015
4QJA
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BU of 4qja by Molmil
Crystal structure of inactive HIV-1 protease in complex with p1-p6 substrate variant (P453L)
Descriptor: Protease, SULFATE ION, p1-p6 peptide
Authors:Lin, K.H, Schiffer, C.A.
Deposit date:2014-06-03
Release date:2014-10-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structural basis and distal effects of Gag substrate coevolution in drug resistance to HIV-1 protease.
Proc.Natl.Acad.Sci.USA, 111, 2014
5YAM
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BU of 5yam by Molmil
Solution structure of mice Met-CCL5/RANTES
Descriptor: C-C motif chemokine 5
Authors:Chen, Y.-C, Chen, S.-P, Lee, Y.-Z, Sue, S.-C.
Deposit date:2017-09-01
Release date:2018-09-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Integrative Model to Coordinate the Oligomerization and Aggregation Mechanisms of CCL5.
J.Mol.Biol., 432, 2020
6QY7
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BU of 6qy7 by Molmil
Human CSNK2A1 bound to ERB-041
Descriptor: 2-(3-FLUORO-4-HYDROXYPHENYL)-7-VINYL-1,3-BENZOXAZOL-5-OL, CHLORIDE ION, Casein kinase II subunit alpha
Authors:Abdul Azeez, K.R, Sorrell, F.J, Krojer, T, Bountra, C, Edwards, A.M, Arrowsmith, C, Knapp, S, Elkins, J.M.
Deposit date:2019-03-08
Release date:2020-03-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:CSNK2A1 bound to ERB-041
To Be Published
4ZP5
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BU of 4zp5 by Molmil
MAP4K4 in complex with inhibitor
Descriptor: 4-[5-(4-chlorophenyl)-1,3-oxazol-2-yl]benzamide, Mitogen-activated protein kinase kinase kinase kinase 4
Authors:Liu, S.
Deposit date:2015-05-07
Release date:2016-10-05
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structure of MAP4K4 complex
To Be Published
5YOZ
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BU of 5yoz by Molmil
Solution structure of truncated Rab5a from Leishmania donovani
Descriptor: Rab5a
Authors:Maheshwari, D, Yadav, R, Mukhopadhyay, A, Arora, A.
Deposit date:2017-10-31
Release date:2018-10-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and Biophysical Characterization of Rab5a from Leishmania Donovani
Biophys. J., 115, 2018
4ZIX
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BU of 4zix by Molmil
Structure of HEWL using Serial Femtosecond Crystallography of Soluble Proteins in Lipidic Cubic Phase
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Fromme, R, Ishchenko, A, Metz, M, Roy-Chowdhury, S, Basu, S, Boutet, S, Fromme, P, White, T.A, Barty, A, Spence, J.C.H, Weierstall, U, Liu, W, Cherezov, V.
Deposit date:2015-04-28
Release date:2015-08-12
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Serial Femtosecond Crystallography of Soluble Proteins in Lipidic Cubic Phase
IUCrJ, 2, 2015
6QQ7
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BU of 6qq7 by Molmil
Bovine insulin at ambient pressure
Descriptor: Insulin
Authors:Kurpiewska, K, Milaczewska, A, Lewinski, K.
Deposit date:2019-02-18
Release date:2019-02-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Insulin conformational changes under high pressure in structural studies and molecular dynamics simulations
J.Mol.Struct., 2020
5YUL
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BU of 5yul by Molmil
Native Structure of hSOD1 in P6322 space group
Descriptor: Dihydrogen tetrasulfide, GLYCEROL, Superoxide dismutase [Cu-Zn], ...
Authors:Manjula, R, Padmanabhan, B.
Deposit date:2017-11-22
Release date:2018-11-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Assessment of ligand binding at a site relevant to SOD1 oxidation and aggregation
FEBS Lett., 592, 2018
4QMS
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BU of 4qms by Molmil
MST3 in complex with DASATINIB
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, N-(2-CHLORO-6-METHYLPHENYL)-2-({6-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]-2-METHYLPYRIMIDIN-4-YL}AMINO)-1,3-THIAZOLE-5-CARBOXAMIDE, ...
Authors:Olesen, S.H, Watts, C, Zhu, J.-Y, Schonbrunn, E.
Deposit date:2014-06-16
Release date:2015-07-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.883 Å)
Cite:Discovery of Diverse Small-Molecule Inhibitors of Mammalian Sterile20-like Kinase 3 (MST3).
Chemmedchem, 11, 2016
8EKO
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BU of 8eko by Molmil
Sperm whale myoglobin mutant L29H F33W F43H (F33W CuBMb)
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ledray, A.P, Dwaraknath, S, Lu, Y.
Deposit date:2022-09-21
Release date:2022-10-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Tryptophan Can Promote Oxygen Reduction to Water in a Biosynthetic Model of Heme Copper Oxidases.
Biochemistry, 62, 2023
5YV5
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BU of 5yv5 by Molmil
Crystal structure of the complex of archaeal ribosomal stalk protein aP1 and archaeal ribosome recycling factor aABCE1.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase RIL, Archaeal ribosomal stalk protein aP1, ...
Authors:Imai, H, Abe, T, Miyoshi, T, Nishikawa, S, Ito, K, Uchiumi, T.
Deposit date:2017-11-24
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The ribosomal stalk protein is crucial for the action of the conserved ATPase ABCE1
Nucleic Acids Res., 46, 2018
6QQC
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BU of 6qqc by Molmil
Cryogenic temperature structure of Hen Egg White Lysozyme recorded after an accumulated dose of 110 kGy
Descriptor: CHLORIDE ION, Lysozyme C
Authors:Gotthard, G, Aumonier, S, Royant, A.
Deposit date:2019-02-18
Release date:2019-06-19
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Specific radiation damage is a lesser concern at room temperature.
Iucrj, 6, 2019
6BO2
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BU of 6bo2 by Molmil
Adducts formed after 1 month in the reaction of dichlorido(1,3-dimethylbenzimidazol-2-ylidene)(eta6-p-cymene)ruthenium(II) with HEWL
Descriptor: CHLORIDE ION, Lysozyme C, RUTHENIUM ION, ...
Authors:Sullivan, M.P, Hartinger, C.G, Goldstone, D.C.
Deposit date:2017-11-17
Release date:2018-05-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Unexpected arene ligand exchange results in the oxidation of an organoruthenium anticancer agent: the first X-ray structure of a protein-Ru(carbene) adduct.
Chem. Commun. (Camb.), 54, 2018
6QQG
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BU of 6qqg by Molmil
High pressure structure of bovine insulin (60 MPa)
Descriptor: Insulin
Authors:Kurpiewska, K, Milaczewska, A, Lewinski, K.
Deposit date:2019-02-18
Release date:2019-03-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.149 Å)
Cite:Insulin conformational changes under high pressure in structural studies and molecular dynamics simulations
J.Mol.Struct., 2020
6C94
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BU of 6c94 by Molmil
Structure Of Cytochrome P450 4B1 (CYP4B1) Complexed with the Inhibitor HET0016
Descriptor: Cytochrome P450 4B1, N-(4-butyl-2-methylphenyl)-N'-hydroxyimidoformamide, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hsu, M.-H, Johnson, E.F.
Deposit date:2018-01-25
Release date:2018-06-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Noncovalent interactions dominate dynamic heme distortion in cytochrome P450 4B1.
J. Biol. Chem., 293, 2018
7UQU
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BU of 7uqu by Molmil
Crystal Structure of Mouse Cadherin-23 EC9
Descriptor: CALCIUM ION, Cadherin-23
Authors:Sandhu, J.S, De La Torre, P, Sotomayor, M.
Deposit date:2022-04-20
Release date:2023-05-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.976 Å)
Cite:Crystal Structure of Mouse Cadherin-23 EC9
To be published
5D8J
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BU of 5d8j by Molmil
Development of a therapeutic monoclonal antibody targeting secreted aP2 to treat type 2 diabetes.
Descriptor: Fatty acid-binding protein, adipocyte, HA3 Fab Heavy Chain, ...
Authors:Doyle, C, Birrane, G.
Deposit date:2015-08-17
Release date:2016-01-13
Last modified:2017-08-02
Method:X-RAY DIFFRACTION (3 Å)
Cite:Development of a therapeutic monoclonal antibody that targets secreted fatty acid-binding protein aP2 to treat type 2 diabetes.
Sci Transl Med, 7, 2015
8G1V
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BU of 8g1v by Molmil
Crystal Structure Matriptase (C731S) in Complex with Inhibitor MM1132-2
Descriptor: CHLORIDE ION, GLYCEROL, N~2~-{[3-(acetamidomethyl)phenyl]acetyl}-N-[(2S)-1-(1,3-benzothiazol-2-yl)-5-carbamimidamido-1,1-dihydroxypentan-2-yl]-L-leucinamide, ...
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Janetka, J.W.
Deposit date:2023-02-03
Release date:2024-07-10
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Use of protease substrate specificity screening in the rational design of selective protease inhibitors with unnatural amino acids: Application to HGFA, matriptase, and hepsin.
Protein Sci., 33, 2024
4QO9
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BU of 4qo9 by Molmil
MST3 IN COMPLEX WITH Danusertib
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Olesen, S.H, Watts, C, Zhu, J.-Y, Schonbrunn, E.
Deposit date:2014-06-19
Release date:2015-07-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of Diverse Small-Molecule Inhibitors of Mammalian Sterile20-like Kinase 3 (MST3).
Chemmedchem, 11, 2016
6BOF
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BU of 6bof by Molmil
Crystal structure of KRAS A146T-GDP demonstrating open switch 1 conformation
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE
Authors:Bera, A.K, Yan, W, Westover, K.D.
Deposit date:2017-11-20
Release date:2019-05-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Tissue-Specific Oncogenic Activity of KRASA146T.
Cancer Discov, 9, 2019

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PDB entries from 2024-10-16

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