Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1SF6
DownloadVisualize
BU of 1sf6 by Molmil
BINDING OF N,N',N"-TRIACETYLCHITOTRIOSE TO HEW LYSOZYME: A POWDER DIFFRACTION STUDY
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LYSOZYME
Authors:Von Dreele, R.B.
Deposit date:2004-02-19
Release date:2004-03-02
Last modified:2024-11-13
Method:POWDER DIFFRACTION
Cite:Binding of N-acetylglucosamine oligosaccharides to hen egg-white lysozyme: a powder diffraction study.
Acta Crystallogr.,Sect.D, 61, 2005
7M0G
DownloadVisualize
BU of 7m0g by Molmil
Magic Angle Spinning NMR Structure of Human Cofilin-2 Assembled on Actin Filaments
Descriptor: Cofilin-2
Authors:Kraus, J, Polenova, T, Perilla, J.P, Xu, C.
Deposit date:2021-03-10
Release date:2022-04-20
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Magic angle spinning NMR structure of human cofilin-2 assembled on actin filaments reveals isoform-specific conformation and binding mode.
Nat Commun, 13, 2022
6PD5
DownloadVisualize
BU of 6pd5 by Molmil
Crystal Structure of a H5N1 influenza virus hemagglutinin at pH 6.5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Hemagglutinin, ...
Authors:Antanasijevic, A, Durst, M.A, Lavie, A, Caffrey, M.
Deposit date:2019-06-18
Release date:2019-11-13
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Identification of a pH sensor in Influenza hemagglutinin using X-ray crystallography.
J.Struct.Biol., 209, 2020
5VI6
DownloadVisualize
BU of 5vi6 by Molmil
Crystal structure of histone deacetylase 8 in complex with trapoxin A
Descriptor: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, Histone deacetylase 8, ...
Authors:Porter, N.J, Christianson, D.W.
Deposit date:2017-04-14
Release date:2017-09-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.237 Å)
Cite:Binding of the Microbial Cyclic Tetrapeptide Trapoxin A to the Class I Histone Deacetylase HDAC8.
ACS Chem. Biol., 12, 2017
7M25
DownloadVisualize
BU of 7m25 by Molmil
Solution NMR Structure of PawL-Derived Peptide PLP-13
Descriptor: PawL-Derived Peptide PLP-13
Authors:Payne, C.D, Rosengren, K.J.
Deposit date:2021-03-16
Release date:2021-03-24
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Structural Characterization of the PawL-Derived Peptide Family, an Ancient Subfamily of Orbitides.
J.Nat.Prod., 84, 2021
5IDK
DownloadVisualize
BU of 5idk by Molmil
Crystal structure of West Nile Virus NS2B-NS3 protease in complex with a capped dipeptide boronate inhibitor
Descriptor: ((R)-1-((S)-3-(4-(aminomethyl)phenyl)-2-benzamidopropaneamido)-4-guanidinobutyl)boronic acid, cyclic double ester with glycerol, DIMETHYL SULFOXIDE, ...
Authors:Hilgenfeld, R, Zhang, L.
Deposit date:2016-02-24
Release date:2016-12-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Peptide-Boronic Acid Inhibitors of Flaviviral Proteases: Medicinal Chemistry and Structural Biology.
J. Med. Chem., 60, 2017
5VIE
DownloadVisualize
BU of 5vie by Molmil
Electrophilic probes for deciphering substrate recognition by O-GlcNAc transferase
Descriptor: 2-{[(2E)-4-chlorobut-2-enoyl]amino}-2-deoxy-beta-D-glucopyranose, 2-{[(2E)-but-2-enoyl]amino}-2-deoxy-beta-D-glucopyranose, CKII, ...
Authors:Jiang, J, Li, B, Hu, C.-W, Worth, M, Fan, D, Li, H.
Deposit date:2017-04-15
Release date:2017-10-18
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Electrophilic probes for deciphering substrate recognition by O-GlcNAc transferase.
Nat. Chem. Biol., 13, 2017
7LL7
DownloadVisualize
BU of 7ll7 by Molmil
[2]Catenane From MccJ25 Variant G12C G21C
Descriptor: GLY-GLY-ALA-GLY-HIS-VAL-PRO-GLU-TYR-PHE, VAL-CYS-ILE-GLY-THR-PRO-ILE-SER-PHE-TYR-CYS
Authors:Link, A.J, Schroeder, H.V.
Deposit date:2021-02-03
Release date:2021-08-04
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:Dynamic covalent self-assembly of mechanically interlocked molecules solely made from peptides.
Nat.Chem., 13, 2021
7LUW
DownloadVisualize
BU of 7luw by Molmil
Structural studies about ScnTx neurotoxin using Solution NMR 2D and 3D
Descriptor: Short-chain neurotoxin
Authors:del Rio-Portilla, F, Lopez-Giraldo, A.E.
Deposit date:2021-02-23
Release date:2021-04-14
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:The Three-Dimensional Structure of the Neurotoxin SCNTX
To Be Published
5IL0
DownloadVisualize
BU of 5il0 by Molmil
Crystal structural of the METTL3-METTL14 complex for N6-adenosine methylation
Descriptor: 1,2-ETHANEDIOL, BROMIDE ION, METTL14, ...
Authors:Wang, X, Guan, Z, Zou, T, Yin, P.
Deposit date:2016-03-04
Release date:2016-05-25
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.882 Å)
Cite:Structural basis of N6-adenosine methylation by the METTL3-METTL14 complex
Nature, 534, 2016
7LI2
DownloadVisualize
BU of 7li2 by Molmil
Omega ester peptide pre-fuscimiditide
Descriptor: Pre-fuscimiditide peptide
Authors:Link, A.J, Elashal, H.E.
Deposit date:2021-01-26
Release date:2022-02-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Biosynthesis and characterization of fuscimiditide, an aspartimidylated graspetide.
Nat.Chem., 14, 2022
7LNS
DownloadVisualize
BU of 7lns by Molmil
NMR solution structure of PsDef2 defensin from P. sylvestris
Descriptor: Defensin-2
Authors:Nesmelova, I.V, Kovaleva, V, Hrunyk, N.I, Yusypovych, Y.M, Shalovylo, Y.I.
Deposit date:2021-02-08
Release date:2022-03-30
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Structure, dynamics, and function of PsDef2 defensin from Pinus sylvestris.
Structure, 30, 2022
5W2I
DownloadVisualize
BU of 5w2i by Molmil
Crystal structure of the core catalytic domain of human inositol phosphate multikinase soaked with C4-analogue of PtdIns(4,5)P2 and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Inositol polyphosphate multikinase,Inositol polyphosphate multikinase, ...
Authors:Wang, H, Shears, S.B.
Deposit date:2017-06-06
Release date:2017-09-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural features of human inositol phosphate multikinase rationalize its inositol phosphate kinase and phosphoinositide 3-kinase activities.
J. Biol. Chem., 292, 2017
5IL7
DownloadVisualize
BU of 5il7 by Molmil
Leucine rich repeat domain of the Chlorobium tepidum Roco protein
Descriptor: Rab family protein
Authors:Gotthardt, K, Wittinghofer, A.
Deposit date:2016-03-04
Release date:2016-03-16
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural model of the dimeric Parkinson's protein LRRK2 reveals a compact architecture involving distant interdomain contacts.
Proc.Natl.Acad.Sci.USA, 113, 2016
7M1D
DownloadVisualize
BU of 7m1d by Molmil
Structural and functional studies about scorpine showed the presence of blocking channel and cytolytic activities as well as two different structural domains
Descriptor: Scorpine
Authors:del Rio-Portilla, F, Lopez-Giraldo, A.E.
Deposit date:2021-03-12
Release date:2022-01-19
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Structural and functional studies of scorpine: A channel blocker and cytolytic peptide.
Toxicon, 222, 2022
1SL6
DownloadVisualize
BU of 1sl6 by Molmil
Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x.
Descriptor: C-type lectin DC-SIGNR, CALCIUM ION, alpha-L-fucopyranose-(1-3)-[beta-D-galactopyranose-(1-4)]2-acetamido-2-deoxy-alpha-D-glucopyranose
Authors:Guo, Y, Feinberg, H, Conroy, E, Mitchell, D.A, Alvarez, R, Blixt, O, Taylor, M.E, Weis, W.I, Drickamer, K.
Deposit date:2004-03-05
Release date:2004-06-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for distinct ligand-binding and targeting properties of the receptors DC-SIGN and DC-SIGNR
Nat.Struct.Mol.Biol., 11, 2004
7M7X
DownloadVisualize
BU of 7m7x by Molmil
NMR Solution Structure of a CsrA-binding peptide
Descriptor: CsrA-binding peptide
Authors:Harvey, P.J, White, A.M, Durek, T, Craik, D.J.
Deposit date:2021-03-29
Release date:2022-02-09
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Phage display-based discovery of cyclic peptides against the broad spectrum bacterial anti-virulence target CsrA
Eur.J.Med.Chem., 231, 2022
7LVG
DownloadVisualize
BU of 7lvg by Molmil
Jug r 2 Leader Sequence Residues 69-111
Descriptor: Vicilin Jug r 2.0101
Authors:Mueller, G.A, Foo, A.C.Y, DeRose, E.F.
Deposit date:2021-02-25
Release date:2022-02-02
Last modified:2024-11-20
Method:SOLUTION NMR
Cite:Structure, Immunogenicity, and IgE Cross-Reactivity among Walnut and Peanut Vicilin-Buried Peptides.
J.Agric.Food Chem., 70, 2022
5ILF
DownloadVisualize
BU of 5ilf by Molmil
The X-ray structure of the adduct formed in the reaction between hen egg white lysozyme and compound 4, a platin(II) compound containing a O, S bidentate ligand
Descriptor: ACETATE ION, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Merlino, A, Ferraro, G.
Deposit date:2016-03-04
Release date:2016-12-07
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Platinum(ii) O,S complexes as potential metallodrugs against Cisplatin resistance.
Dalton Trans, 45, 2016
5ILN
DownloadVisualize
BU of 5iln by Molmil
Crystal structure of Aspartate Transcarbamoylase from Plasmodium falciparum (PfATC) with bound citrate
Descriptor: Aspartate carbamoyltransferase, CITRATE ANION, GLYCEROL, ...
Authors:Lunev, S, Bosch, S.S, Batista, F.D.A, Wrenger, C, Groves, M.R.
Deposit date:2016-03-04
Release date:2017-03-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structure of truncated Aspartate Transcarbamoylase from Plasmodium falciparum
To be published
5W3Q
DownloadVisualize
BU of 5w3q by Molmil
L28F E.coli DHFR in complex with NADPH
Descriptor: CALCIUM ION, Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Oyen, D, Wright, P.E, Wilson, I.A.
Deposit date:2017-06-08
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Defining the Structural Basis for Allosteric Product Release from E. coli Dihydrofolate Reductase Using NMR Relaxation Dispersion.
J. Am. Chem. Soc., 139, 2017
7LOI
DownloadVisualize
BU of 7loi by Molmil
Model of the HIV-1 gp41 membrane-proximal external region, transmembrane domain and cytoplasmic tail
Descriptor: Transmembrane protein gp41
Authors:Piai, A, Fu, Q, Sharp, A.K, Bighi, B, Brown, A.M, Chou, J.J.
Deposit date:2021-02-10
Release date:2021-04-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Model of the Entire Membrane-Interacting Region of the HIV-1 Fusion Protein and Its Perturbation of Membrane Morphology.
J.Am.Chem.Soc., 143, 2021
5VIP
DownloadVisualize
BU of 5vip by Molmil
Crystal structure of Pseudomonas malonate decarboxylase MdcD-MdcE hetero-dimer
Descriptor: MdcD, MdcE
Authors:Maderbocus, R, Tong, L.
Deposit date:2017-04-17
Release date:2017-08-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.857 Å)
Cite:Crystal structure of a Pseudomonas malonate decarboxylase holoenzyme hetero-tetramer.
Nat Commun, 8, 2017
7LXC
DownloadVisualize
BU of 7lxc by Molmil
Structure and Interactions of DED1 of human cFLIP
Descriptor: DED1ch
Authors:Panaitiu, A.E, Basiashvili, T, Mierke, D.F, Pellegrini, M.
Deposit date:2021-03-03
Release date:2021-12-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An engineered construct of cFLIP provides insight into DED1 structure and interactions.
Structure, 30, 2022
7LP4
DownloadVisualize
BU of 7lp4 by Molmil
Structure of Nedd4L WW3 domain
Descriptor: E3 ubiquitin-protein ligase NEDD4-like
Authors:Alam, S.L, Alian, A, Thompson, T, Rheinemann, L, Volkman, B.F, Peterson, F.C, Sundquist, W.I.
Deposit date:2021-02-11
Release date:2021-07-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Interactions between AMOT PPxY motifs and NEDD4L WW domains function in HIV-1 release.
J.Biol.Chem., 297, 2021

243531

PDB entries from 2025-10-22

PDB statisticsPDBj update infoContact PDBjnumon