1S48
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![BU of 1s48 by Molmil](/molmil-images/mine/1s48) | Crystal structure of RNA-dependent RNA polymerase construct 1 (residues 71-679) from BVDV | Descriptor: | RNA-dependent RNA polymerase | Authors: | Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G. | Deposit date: | 2004-01-15 | Release date: | 2004-04-06 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation. Proc.Natl.Acad.Sci.Usa, 101, 2004
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1KIS
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2FBO
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![BU of 2fbo by Molmil](/molmil-images/mine/2fbo) | Crystal Structure of the Two Tandem V-type Regions of VCBP3 (v-region-containing chitin binding protein) to 1.85 A | Descriptor: | variable region-containing chitin-binding protein 3 | Authors: | Hernandez Prada, J.A, Haire, R.N, Jakoncic, J, Cannon, J.P, Litman, G.W, Ostrov, D.A. | Deposit date: | 2005-12-09 | Release date: | 2006-10-17 | Last modified: | 2017-10-18 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Ancient evolutionary origin of diversified variable regions demonstrated by crystal structures of an immune-type receptor in amphioxus Nat.Immunol., 7, 2006
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5T5S
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![BU of 5t5s by Molmil](/molmil-images/mine/5t5s) | A fragment of a human tRNA synthetase | Descriptor: | Alanine--tRNA ligase, cytoplasmic | Authors: | Sun, L, Schimmel, P. | Deposit date: | 2016-08-31 | Release date: | 2016-11-30 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (2.202 Å) | Cite: | Two crystal structures reveal design for repurposing the C-Ala domain of human AlaRS. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
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400D
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![BU of 400d by Molmil](/molmil-images/mine/400d) | |
7JU1
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![BU of 7ju1 by Molmil](/molmil-images/mine/7ju1) | The FARFAR-NMR Ensemble of 29-mer HIV-1 Trans-activation Response Element RNA (N=20) | Descriptor: | RNA (29-MER) | Authors: | Shi, H, Rangadurai, A, Roy, R, Yesselman, J.D, Al-Hashimi, H.M. | Deposit date: | 2020-08-18 | Release date: | 2020-10-07 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Rapid and accurate determination of atomistic RNA dynamic ensemble models using NMR and structure prediction Nat Commun, 11, 2020
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1D8H
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![BU of 1d8h by Molmil](/molmil-images/mine/1d8h) | X-RAY CRYSTAL STRUCTURE OF YEAST RNA TRIPHOSPHATASE IN COMPLEX WITH SULFATE AND MANGANESE IONS. | Descriptor: | MANGANESE (II) ION, SULFATE ION, mRNA TRIPHOSPHATASE CET1 | Authors: | Lima, C.D, Wang, L.K, Shuman, S. | Deposit date: | 1999-10-24 | Release date: | 1999-11-29 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structure and mechanism of yeast RNA triphosphatase: an essential component of the mRNA capping apparatus. Cell(Cambridge,Mass.), 99, 1999
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3CES
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![BU of 3ces by Molmil](/molmil-images/mine/3ces) | Crystal Structure of E.coli MnmG (GidA), a Highly-Conserved tRNA Modifying Enzyme | Descriptor: | tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA | Authors: | Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI) | Deposit date: | 2008-02-29 | Release date: | 2009-03-03 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.412 Å) | Cite: | Structure-function analysis of Escherichia coli MnmG (GidA), a highly conserved tRNA-modifying enzyme. J.Bacteriol., 191, 2009
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2JYF
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4C4Q
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![BU of 4c4q by Molmil](/molmil-images/mine/4c4q) | Cryo-EM map of the CSFV IRES in complex with the small ribosomal 40S subunit and DHX29 | Descriptor: | INTERNAL RIBOSOMAL ENTRY SITE | Authors: | Hashem, Y, desGeorges, A, Dhote, V, Langlois, R, Liao, H.Y, Grassucci, R.A, Pestova, T.V, Hellen, C.U.T, Frank, J. | Deposit date: | 2013-09-07 | Release date: | 2013-10-30 | Last modified: | 2024-05-08 | Method: | ELECTRON MICROSCOPY (8.5 Å) | Cite: | Hepatitis-C-Virus-Like Internal Ribosome Entry Sites Displace Eif3 to Gain Access to the 40S Subunit Nature, 503, 2013
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2PJD
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![BU of 2pjd by Molmil](/molmil-images/mine/2pjd) | Crystal structure of 16S rRNA methyltransferase RsmC | Descriptor: | Ribosomal RNA small subunit methyltransferase C | Authors: | Sunita, S, Purta, E, Durawa, M, Tkaczuk, K.L, Bujnicki, J.M, Sivaraman, J. | Deposit date: | 2007-04-16 | Release date: | 2007-07-03 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Functional specialization of domains tandemly duplicated within 16S rRNA methyltransferase RsmC Nucleic Acids Res., 35, 2007
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2LC8
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3DDK
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![BU of 3ddk by Molmil](/molmil-images/mine/3ddk) | Coxsackievirus B3 3Dpol RNA Dependent RNA Polymerase | Descriptor: | RNA polymerase B3 3Dpol, SODIUM ION, SULFATE ION | Authors: | Campagnola, G, Weygandt, M.H, Scoggin, K.E, Peersen, O.B. | Deposit date: | 2008-06-05 | Release date: | 2008-09-23 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (2.25 Å) | Cite: | Crystal Structure of Coxsackievirus B3 3Dpol Highlights Functional Importance of Residue 5 in Picornaviral Polymerases J.Virol., 82, 2008
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2JYH
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6LY6
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![BU of 6ly6 by Molmil](/molmil-images/mine/6ly6) | PylRS C-terminus domain mutant bound with 3-(1-Naphthyl)-L-alanine and AMPNP | Descriptor: | MAGNESIUM ION, NAPHTHALEN-2-YL-3-ALANINE, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... | Authors: | Weng, J.H, Tsai, M.D, Wang, Y.S. | Deposit date: | 2020-02-13 | Release date: | 2020-07-08 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.5001328 Å) | Cite: | Probing the Active Site of Deubiquitinase USP30 with Noncanonical Tryptophan Analogues. Biochemistry, 59, 2020
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6LY3
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![BU of 6ly3 by Molmil](/molmil-images/mine/6ly3) | PylRS C-terminus domain mutant bound with 3-Benzothienyl-L-alanine and AMPNP | Descriptor: | 3-(1-benzothiophen-3-yl)-L-alanine, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... | Authors: | Weng, J.H, Tsai, M.D, Wang, Y.S. | Deposit date: | 2020-02-13 | Release date: | 2020-07-08 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.89590144 Å) | Cite: | Probing the Active Site of Deubiquitinase USP30 with Noncanonical Tryptophan Analogues. Biochemistry, 59, 2020
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6LYA
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![BU of 6lya by Molmil](/molmil-images/mine/6lya) | PylRS C-terminus domain mutant bound with 1-Methyl-L-tryptophan and AMPNP | Descriptor: | 1,2-ETHANEDIOL, 1-Methyl-L-tryptophan, MAGNESIUM ION, ... | Authors: | Weng, J.H, Tsai, M.D, Wang, Y.S. | Deposit date: | 2020-02-13 | Release date: | 2020-07-08 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.590702 Å) | Cite: | Probing the Active Site of Deubiquitinase USP30 with Noncanonical Tryptophan Analogues. Biochemistry, 59, 2020
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8UYG
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![BU of 8uyg by Molmil](/molmil-images/mine/8uyg) | BtCoV-HKU5 5' proximal stem-loop 5, conformation 2 | Descriptor: | RNA (135-MER) | Authors: | Kretsch, R.C, Xu, L, Zheludev, I.N, Zhou, X, Huang, R, Nye, G, Li, S, Zhang, K, Chiu, W, Das, R. | Deposit date: | 2023-11-13 | Release date: | 2023-12-06 | Last modified: | 2024-03-13 | Method: | ELECTRON MICROSCOPY (6.4 Å) | Cite: | Tertiary folds of the SL5 RNA from the 5' proximal region of SARS-CoV-2 and related coronaviruses. Proc.Natl.Acad.Sci.USA, 121, 2024
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6LY7
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![BU of 6ly7 by Molmil](/molmil-images/mine/6ly7) | PylRS C-terminus domain mutant bound with 1-Formyl-L-tryptophan and AMPNP | Descriptor: | MAGNESIUM ION, N1-FORMYL-TRYPTOPHAN, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... | Authors: | Weng, J.H, Tsai, M.D, Wang, Y.S. | Deposit date: | 2020-02-13 | Release date: | 2020-07-08 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.09447265 Å) | Cite: | Probing the Active Site of Deubiquitinase USP30 with Noncanonical Tryptophan Analogues. Biochemistry, 59, 2020
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6LYB
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![BU of 6lyb by Molmil](/molmil-images/mine/6lyb) | PylRS C-terminus domain mutant in complex with 3-Benzothienyl-D-alanine and AMPNP | Descriptor: | (2R)-2-azanyl-3-(1-benzothiophen-3-yl)propanoic acid, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... | Authors: | Weng, J.H, Tsai, M.D, Wang, Y.S. | Deposit date: | 2020-02-13 | Release date: | 2020-07-08 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.90366471 Å) | Cite: | Probing the Active Site of Deubiquitinase USP30 with Noncanonical Tryptophan Analogues. Biochemistry, 59, 2020
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1YVS
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![BU of 1yvs by Molmil](/molmil-images/mine/1yvs) | Trimeric domain swapped barnase | Descriptor: | BARNASE, SULFATE ION | Authors: | Zegers, I, Wyns, L. | Deposit date: | 1998-12-10 | Release date: | 1999-02-02 | Last modified: | 2024-05-22 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Trimeric domain-swapped barnase. Proc.Natl.Acad.Sci.USA, 96, 1999
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6JRE
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![BU of 6jre by Molmil](/molmil-images/mine/6jre) | Structure of N-terminal domain of Plasmodium vivax p43 (PfNTD) solved by Co-SAD phasing | Descriptor: | Aminoacyl-tRNA synthetase-interacting multifunctional protein p43, COBALT (II) ION | Authors: | Manickam, Y, Harlos, K, Sharma, M, Gupta, S, Sharma, A. | Deposit date: | 2019-04-03 | Release date: | 2020-03-11 | Method: | X-RAY DIFFRACTION (2.59 Å) | Cite: | Crystal structures of the two domains that constitute the Plasmodium vivax p43 protein. Acta Crystallogr D Struct Biol, 76, 2020
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2LSN
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![BU of 2lsn by Molmil](/molmil-images/mine/2lsn) | Solution structure of PFV RNase H domain | Descriptor: | RNase H | Authors: | Leo, B, Schweimer, K, Woehrl, B. | Deposit date: | 2012-05-03 | Release date: | 2012-10-17 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | The solution structure of the prototype foamy virus RNase H domain indicates an important role of the basic loop in substrate binding. Retrovirology, 9, 2012
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1QMH
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![BU of 1qmh by Molmil](/molmil-images/mine/1qmh) | Crystal structure of RNA 3'-terminal phosphate cyclase, an ubiquitous enzyme with unusual topology | Descriptor: | 1-HYDROXYSULFANYL-4-MERCAPTO-BUTANE-2,3-DIOL, CITRIC ACID, RNA 3'-TERMINAL PHOSPHATE CYCLASE | Authors: | Palm, G.J, Billy, E, Filipowicz, W, Wlodawer, A. | Deposit date: | 1999-09-28 | Release date: | 2000-01-11 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Crystal Structure of RNA 3'-Terminal Phosphate Cyclase, a Ubiquitous Enzyme with Unusual Topology Structure, 8, 2000
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1EIK
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![BU of 1eik by Molmil](/molmil-images/mine/1eik) | Solution Structure of RNA Polymerase Subunit RPB5 from Methanobacterium Thermoautotrophicum | Descriptor: | RNA POLYMERASE SUBUNIT RPB5 | Authors: | Yee, A, Booth, V, Dharamsi, A, Engel, A, Edwards, A.M, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG) | Deposit date: | 2000-02-25 | Release date: | 2000-06-21 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution structure of the RNA polymerase subunit RPB5 from Methanobacterium thermoautotrophicum. Proc.Natl.Acad.Sci.USA, 97, 2000
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