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1HCJ
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BU of 1hcj by Molmil
Photoproduct of the wild-type Aequorea victoria Green Fluorescent Protein
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Van Thor, J.J, Gensch, T, Hellingwerf, K.J, Johnson, L.
Deposit date:2001-05-04
Release date:2001-12-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Phototransformation of Green Fluorescent Protein with Uv and Visible Light Leads to Decarboxylation of Glutamate 222
Nat.Struct.Biol., 9, 2002
2EU8
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BU of 2eu8 by Molmil
Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (Q199R)
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, CALCIUM ION, ...
Authors:Chen, S, Shamoo, Y.
Deposit date:2005-10-28
Release date:2006-06-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:In vivo molecular evolution reveals biophysical origins of organismal fitness.
Mol.Cell, 22, 2006
4EES
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BU of 4ees by Molmil
Crystal structure of iLOV
Descriptor: FLAVIN MONONUCLEOTIDE, Phototropin-2
Authors:Hitomi, K, Christie, J.M, Arvai, A.S, Hartfield, K.A, Pratt, A.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2012-03-28
Release date:2012-05-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.805 Å)
Cite:Structural Tuning of the Fluorescent Protein iLOV for Improved Photostability.
J.Biol.Chem., 287, 2012
8DTA
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BU of 8dta by Molmil
Metal sensitive GFP (mseGFP) complexed with phenylarsine oxide.
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Green fluorescent protein, ...
Authors:Rosenbaum, J.C, Carlson, A.E.
Deposit date:2022-07-25
Release date:2023-07-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Glutathione modulates metal binding to proteins.
TBD
8WU6
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BU of 8wu6 by Molmil
Structure of a Nerylneryl Diphosphate Synthase from Solanum lycopersicum
Descriptor: Nerylneryl diphosphate synthase CPT2, chloroplastic
Authors:Li, F.R, Wang, Q.L, Pan, X.M, Dong, L.B.
Deposit date:2023-10-20
Release date:2024-05-08
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Discovery, Structure, and Engineering of a cis-Geranylfarnesyl Diphosphate Synthase.
Angew.Chem.Int.Ed.Engl., 63, 2024
8A83
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BU of 8a83 by Molmil
rsEGFP2 with a chlorinated chromophore in the fluorescent ON-state in a crystal dehydrated after illumination
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Fadini, A, van Thor, J, Chang, J.
Deposit date:2022-06-21
Release date:2023-07-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism.
J.Am.Chem.Soc., 145, 2023
6M9X
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BU of 6m9x by Molmil
X-ray Structure of Branchiostoma floridae fluorescent protein lanFP10A
Descriptor: Fluorescent protein lanFP10A
Authors:Muslinkina, L, Pletneva, N, Pletnev, V, Pletnev, S.
Deposit date:2018-08-24
Release date:2019-03-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural Factors Enabling Successful GFP-Like Proteins with Alanine as the Third Chromophore-Forming Residue.
J. Mol. Biol., 431, 2019
7LG4
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BU of 7lg4 by Molmil
Green fluorescent protein from Aequorea macrodactyla - amacGFP
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Bozhanova, N.G, Meiler, J.
Deposit date:2021-01-19
Release date:2021-01-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Heterogeneity of the GFP fitness landscape and data-driven protein design.
Elife, 11, 2022
6QQ9
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BU of 6qq9 by Molmil
Cryogenic temperature structure of the fluorescent protein Cerulean recorded after an accumulated dose of 5.8 MGy
Descriptor: CARBON DIOXIDE, Green fluorescent protein
Authors:Gotthard, G, Aumonier, S, Royant, A.
Deposit date:2019-02-18
Release date:2019-06-19
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Specific radiation damage is a lesser concern at room temperature.
Iucrj, 6, 2019
3DKV
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BU of 3dkv by Molmil
Crystal structure of adenylate kinase variant AKlse1
Descriptor: 1,2-ETHANEDIOL, Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ...
Authors:Bannen, R.M, Bianchetti, C.M, Bingman, C.A, Bitto, E.B.
Deposit date:2008-06-26
Release date:2009-06-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of adenylate kinase variant AKlse1.
To be Published
2H9W
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BU of 2h9w by Molmil
Green fluorescent protein ground states: the influence of a second protonation site near the chromophore
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Garau, G.
Deposit date:2006-06-12
Release date:2007-04-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Green Fluorescent Protein Ground States: The Influence of a Second Protonation Site near the Chromophore.
Biochemistry, 46, 2007
7Z01
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BU of 7z01 by Molmil
Z-SBTubA4 photoswitch bound to tubulin-DARPin D1 complex
Descriptor: 2-methoxy-5-[2-(5,6,7-trimethoxy-1,3-benzothiazol-2-yl)ethyl]phenol, CALCIUM ION, Designed Ankyrin Repeat Protein (DARPIN) D1, ...
Authors:Wranik, M, Weinert, T, Standfuss, J, Steinmetz, M.
Deposit date:2022-02-21
Release date:2022-03-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:In Vivo Photocontrol of Microtubule Dynamics and Integrity, Migration and Mitosis, by the Potent GFP-Imaging-Compatible Photoswitchable Reagents SBTubA4P and SBTub2M.
J.Am.Chem.Soc., 144, 2022
2C9I
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BU of 2c9i by Molmil
Structure of the fluorescent protein asFP499 from Anemonia sulcata
Descriptor: GREEN FLUORESCENT PROTEIN ASFP499
Authors:Renzi, F, Nienhaus, K, Wiedenmann, J, Vallone, B, Nienhaus, G.U.
Deposit date:2005-12-12
Release date:2007-01-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Chromophore-Protein Interactions in the Anthozoan Green Fluorescent Protein Asfp499
Biophys.J., 91, 2006
6ZJB
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BU of 6zjb by Molmil
Crystal structure of human adenylate kinase 3, AK3, in complex with inhibitor Gp5A
Descriptor: GTP:AMP phosphotransferase AK3, mitochondrial, MAGNESIUM ION, ...
Authors:Grundstrom, C, Rogne, P, Wolf-Watz, M, Sauer-Eriksson, A.E.
Deposit date:2020-06-28
Release date:2020-09-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.822 Å)
Cite:Structural Basis for GTP versus ATP Selectivity in the NMP Kinase AK3.
Biochemistry, 59, 2020
4ZF4
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BU of 4zf4 by Molmil
Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(Cl1Y), H148D; circular permutant (50-51)
Descriptor: Green fluorescent protein
Authors:Oltrogge, L.M, Boxer, S.G.
Deposit date:2015-04-21
Release date:2015-06-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.823 Å)
Cite:Short Hydrogen Bonds and Proton Delocalization in Green Fluorescent Protein (GFP).
Acs Cent.Sci., 1, 2015
8SFV
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BU of 8sfv by Molmil
High affinity nanobodies to GFP
Descriptor: GLYCEROL, Green fluorescent protein, LaG19, ...
Authors:Ketaren, N.E, Rout, M.P, Bonanno, J.B, Almo, S.C.
Deposit date:2023-04-11
Release date:2024-05-22
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:High affinity nanobodies to GFP
To Be Published
7NUU
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BU of 7nuu by Molmil
Crystal structure of human AMDHD2 in complex with Zn
Descriptor: GLYCEROL, N-acetylglucosamine-6-phosphate deacetylase, ZINC ION
Authors:Ruegenberg, S, Kroef, V, Baumann, U, Denzel, M.S.
Deposit date:2021-03-14
Release date:2021-04-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.836 Å)
Cite:GFPT2/GFAT2 and AMDHD2 act in tandem to control the hexosamine pathway.
Elife, 11, 2022
8I4K
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BU of 8i4k by Molmil
Structure of Azami Red1.0, a red fluorescent protein engineered from Azami Green
Descriptor: Azami Red1.0, CALCIUM ION
Authors:Otsubo, S, Takekawa, N, Imamura, H, Imada, K.
Deposit date:2023-01-19
Release date:2023-11-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Red fluorescent proteins engineered from green fluorescent proteins.
Proc.Natl.Acad.Sci.USA, 120, 2023
2AG5
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BU of 2ag5 by Molmil
Crystal Structure of Human DHRS6
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, dehydrogenase/reductase (SDR family) member 6
Authors:Kunde, G, Lukacik, P, Papagrigoriou, E, Sundstrom, M, Arrowsmith, C, Weigelt, J, Edwards, A, Von Delft, F, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2005-07-26
Release date:2005-08-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Characterization of human DHRS6, an orphan short chain dehydrogenase/reductase enzyme: a novel, cytosolic type 2 R-beta-hydroxybutyrate dehydrogenase
J.Biol.Chem., 281, 2006
1QBA
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BU of 1qba by Molmil
BACTERIAL CHITOBIASE, GLYCOSYL HYDROLASE FAMILY 20
Descriptor: CHITOBIASE, SULFATE ION
Authors:Tews, I, Perrakis, A, Oppenheim, A, Dauter, Z, Wilson, K.S, Vorgias, C.E.
Deposit date:1996-06-06
Release date:1997-01-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Bacterial chitobiase structure provides insight into catalytic mechanism and the basis of Tay-Sachs disease.
Nat.Struct.Biol., 3, 1996
6YLN
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BU of 6yln by Molmil
mTurquoise2 SG P212121 - Directional optical properties of fluorescent proteins
Descriptor: EGFP, POTASSIUM ION
Authors:Myskova, J, Rybakova, O, Brynda, J, Lazar, J.
Deposit date:2020-04-07
Release date:2020-12-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Directionality of light absorption and emission in representative fluorescent proteins.
Proc.Natl.Acad.Sci.USA, 117, 2020
5MA5
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BU of 5ma5 by Molmil
GFP-binding DARPin fusion gc_K11
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, Green fluorescent protein, ...
Authors:Hansen, S, Stueber, J, Ernst, P, Koch, A, Bojar, D, Batyuk, A, Plueckthun, A.
Deposit date:2016-11-03
Release date:2017-11-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Design and applications of a clamp for Green Fluorescent Protein with picomolar affinity.
Sci Rep, 7, 2017
2R37
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BU of 2r37 by Molmil
Crystal structure of human glutathione peroxidase 3 (selenocysteine to glycine mutant)
Descriptor: CHLORIDE ION, Glutathione peroxidase 3, SODIUM ION
Authors:Pilka, E.S, Guo, K, Gileadi, O, Rojkowa, A, von Delft, F, Pike, A.C.W, Kavanagh, K.L, Johannson, C, Sundstrom, M, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2007-08-29
Release date:2007-09-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of human glutathione peroxidase 3 (selenocysteine to glycine mutant).
TO BE PUBLISHED
4WEO
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BU of 4weo by Molmil
Crystal Structure of a Putative acetoin(Diacetyl) Reductase Burkholderia cenocepacia
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-09-10
Release date:2014-09-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of a Putative acetoin(Diacetyl) Reductase Burkholderia cenocepacia
to be published
1E4Y
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BU of 1e4y by Molmil
Mutant P9L of adenylate kinase from E. coli, modified in the Gly-loop
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
Authors:Mueller, C.W, Schulz, G.E.
Deposit date:2000-07-12
Release date:2000-08-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of two mutants of adenylate kinase from Escherichia coli that modify the Gly-loop.
Proteins, 15, 1993

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