PDB: 98225 resultsInfo pagesStatus searchChemie searchBIRD

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1ZLX	The apo structure of human glycinamide ribonucleotide transformylase Descriptor: GLYCEROL, Phosphoribosylglycinamide formyltransferase Authors: Dahms, T.E, Sainz, G, Giroux, E.L, Caperelli, C.A, Smith, J.L. Deposit date: 2005-05-09 Release date: 2005-08-23 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.2 Å) Cite: The apo and ternary complex structures of a chemotherapeutic target: human glycinamide ribonucleotide transformylase. Biochemistry, 44, 2005
3VYT	Crystal structure of the HypC-HypD-HypE complex (form I inward) Descriptor: CHLORIDE ION, Hydrogenase expression/formation protein HypC, Hydrogenase expression/formation protein HypD, ... Authors: Watanabe, S, Miki, K. Deposit date: 2012-10-02 Release date: 2012-11-28 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Crystal structures of the HypCD complex and the HypCDE ternary complex: transient intermediate complexes during [NiFe] hydrogenase maturation Structure, 20, 2012
6Y2S	Escherichia coli R318A RnlA endoribonuclease (single alanine mutant of RnlA) Descriptor: mRNA endoribonuclease toxin LS Authors: Garcia-Rodriguez, G, Loris, R. Deposit date: 2020-02-17 Release date: 2021-03-31 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (3.79 Å) Cite: Quaternary structure changes control ribonuclease activity of RnlA toxin. To Be Published
6DM7	NMR structure for Sp1 transcription factor duplex 5'-d(GGGGCGGGG) Descriptor: DNA (5'-D(*CP*CP*CP*CP*GP*CP*CP*CP*C)-3'), DNA (5'-D(*GP*GP*GP*GP*CP*GP*GP*GP*G)-3') Authors: Davis, E.V, Hennig, M, Arya, D.P. Deposit date: 2018-06-04 Release date: 2019-06-12 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: An NMR Structure Determination and Analysis of Four Sp1 Consensus Sequences To Be Published
3VYR	Crystal structure of the HypC-HypD complex Descriptor: CITRIC ACID, Hydrogenase expression/formation protein HypC, Hydrogenase expression/formation protein HypD, ... Authors: Watanabe, S, Miki, K. Deposit date: 2012-10-02 Release date: 2012-11-28 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Crystal structures of the HypCD complex and the HypCDE ternary complex: transient intermediate complexes during [NiFe] hydrogenase maturation Structure, 20, 2012
6DN4	Cronobacter sakazakii (Enterobacter sakazakii) Metallo-beta-lactamse HARLDQ motif Descriptor: Beta-lactamase Authors: Monteiro Pedroso, M, Waite, D, Natasa, M, McGeary, R, Guddat, L, Hugenholtz, P, Schenk, G. Deposit date: 2018-06-06 Release date: 2019-06-12 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Broad spectrum antibiotic-degrading metallo-beta-lactamases are phylogenetically diverse Protein Cell, 2020
4P74	PheRS in complex with compound 3a Descriptor: N-[(3S)-1,1-dioxidotetrahydrothiophen-3-yl]-2-[(4-methylphenoxy)methyl]-1,3-thiazole-4-carboxamide, Phenylalanine--tRNA ligase alpha subunit, Phenylalanine--tRNA ligase beta subunit Authors: Ferguson, A.D. Deposit date: 2014-03-25 Release date: 2014-06-25 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.7 Å) Cite: The role of a novel auxiliary pocket in bacterial phenylalanyl-tRNA synthetase druggability. J.Biol.Chem., 289, 2014
3NO0	Aquifex aeolicus type IIA topoisomerase C-terminal domain Descriptor: DNA gyrase subunit A, GLYCEROL, NITRATE ION Authors: Tretter, E.M, Lerman, J.C, Berger, J.M. Deposit date: 2010-06-24 Release date: 2010-12-01 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.3004 Å) Cite: A naturally chimeric type IIA topoisomerase in Aquifex aeolicus highlights an evolutionary path for the emergence of functional paralogs. Proc.Natl.Acad.Sci.USA, 107, 2010
3VYS	Crystal structure of the HypC-HypD-HypE complex (form I) Descriptor: Hydrogenase expression/formation protein HypC, Hydrogenase expression/formation protein HypD, Hydrogenase expression/formation protein HypE, ... Authors: Watanabe, S, Miki, K. Deposit date: 2012-10-02 Release date: 2012-11-28 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Crystal structures of the HypCD complex and the HypCDE ternary complex: transient intermediate complexes during [NiFe] hydrogenase maturation Structure, 20, 2012
6DXM	NMR structure for Sp1 transcription factor duplex 5'-d(TGGGCGGGG) Descriptor: DNA (5'-D(*CP*CP*CP*CP*GP*CP*CP*CP*A)-3'), DNA (5'-D(*TP*GP*GP*GP*CP*GP*GP*GP*G)-3') Authors: Davis, E.V, Hennig, M, Arya, D.P. Deposit date: 2018-06-29 Release date: 2019-07-03 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: An NMR Structure Determination and Analysis of Four Sp1 Consensus Sequences To Be Published
6DVT	NMR structure for Sp1 transcription factor duplex 5'-d(GGGGCGGGA) Descriptor: DNA (5'-D(*GP*GP*GP*GP*CP*GP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*CP*GP*CP*CP*CP*C)-3') Authors: Davis, E.V, Hennig, M, Arya, D.P. Deposit date: 2018-06-25 Release date: 2019-07-03 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: An NMR Structure Determination and Analysis of Four Sp1 Consensus Sequences To Be Published
5XOA	Thanatin M21F in complex with LPS Descriptor: Thanatin Authors: Sinha, S, Bhattacharyya, S. Deposit date: 2017-05-27 Release date: 2018-06-27 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Thanatin M21F in complex with LPS To Be Published
1A69	PURINE NUCLEOSIDE PHOSPHORYLASE IN COMPLEX WITH FORMYCIN B AND SULPHATE (PHOSPHATE) Descriptor: FORMYCIN B, PURINE NUCLEOSIDE PHOSPHORYLASE, SULFATE ION Authors: Koellner, G, Luic, M, Shugar, D, Saenger, W, Bzowska, A. Deposit date: 1998-03-08 Release date: 1998-10-14 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal structure of the ternary complex of E. coli purine nucleoside phosphorylase with formycin B, a structural analogue of the substrate inosine, and phosphate (Sulphate) at 2.1 A resolution. J.Mol.Biol., 280, 1998
3IRX	Crystal Structure of HIV-1 reverse transcriptase (RT) in complex with the Non-nucleoside RT Inhibitor (E)-S-Methyl 5-(1-(3,7-Dimethyl-2-oxo-2,3-dihydrobenzo[d]oxazol-5-yl)-5-(5-methyl-1,3,4-oxadiazol-2-yl)pent-1-enyl)-2-methoxy-3-methylbenzothioate. Descriptor: (E)-S-Methyl 5-(1-(3,7-Dimethyl-2-oxo-2,3-dihydrobenzo[d]oxazol-5-yl)-5-(5-methyl-1,3,4-oxadiazol-2-yl)pent-1-enyl)-2-methoxy-3-methy lbenzothioate, Reverse transcriptase, Reverse transcriptase/ribonuclease H Authors: Ho, W.C, Arnold, E. Deposit date: 2009-08-24 Release date: 2010-04-07 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Crystal Structure of HIV-1 reverse transcriptase (RT) in complex with the alkenyldiarylmethane (ADAM) Non-nucleoside RT Inhibitor (E)-S-Methyl 5-(1-(3,7-Dimethyl-2-oxo-2,3-dihydrobenzo[d]oxazol-5-yl)-5-(5-methyl-1,3,4-oxadiazol-2-yl)pent-1-enyl)-2-methoxy-3-methylbenzothioate. J.Med.Chem., 52, 2009
6EN6	Crystal structure B of the Angiotensin-1 converting enzyme N-domain in complex with a diprolyl inhibitor. Descriptor: (2~{S})-1-[(2~{S})-2-[[(1~{S})-1-[(2~{S})-1-[(2~{S})-2-azanyl-4-oxidanyl-4-oxidanylidene-butanoyl]pyrrolidin-2-yl]-2-oxidanyl-2-oxidanylidene-ethyl]amino]propanoyl]pyrrolidine-2-carboxylic acid, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Cozier, G.E, Acharya, K.R, Fienberg, S, Chibale, K, Sturrock, E.D. Deposit date: 2017-10-04 Release date: 2018-03-07 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.8 Å) Cite: The Design and Development of a Potent and Selective Novel Diprolyl Derivative That Binds to the N-Domain of Angiotensin-I Converting Enzyme. J. Med. Chem., 61, 2018
3VYU	Crystal structure of the HypC-HypD-HypE complex (form II) Descriptor: Hydrogenase expression/formation protein HypC, Hydrogenase expression/formation protein HypD, Hydrogenase expression/formation protein HypE, ... Authors: Watanabe, S, Miki, K. Deposit date: 2012-10-02 Release date: 2012-11-28 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (2.75 Å) Cite: Crystal structures of the HypCD complex and the HypCDE ternary complex: transient intermediate complexes during [NiFe] hydrogenase maturation Structure, 20, 2012
5WDO	H-Ras bound to GMP-PNP at 277K Descriptor: CALCIUM ION, GTPase HRas, MAGNESIUM ION, ... Authors: Cofsky, J.C, Bandaru, P, Gee, C.L, Kuriyan, J. Deposit date: 2017-07-05 Release date: 2017-07-19 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Deconstruction of the Ras switching cycle through saturation mutagenesis. Elife, 6, 2017
5WF6	Agonist bound human A2a adenosine receptor with S91A mutation at 2.90 A resolution Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 6-(2,2-diphenylethylamino)-9-[(2R,3R,4S,5S)-5-(ethylcarbamoyl)-3,4-dihydroxy-oxolan-2-yl]-N-[2-[(1-pyridin-2-ylpiperidin-4-yl)carbamoylamino]ethyl]purine-2-carboxamide, Human A2a adenosine receptor T4L chimera Authors: White, K.L, Eddy, M.T, Gao, Z, Han, G.W, Hanson, M.A, Lian, T, Deary, A, Patel, N, Jacobson, K.A, Katritch, V, Stevens, R.C. Deposit date: 2017-07-11 Release date: 2018-02-21 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Structural Connection between Activation Microswitch and Allosteric Sodium Site in GPCR Signaling. Structure, 26, 2018
6ED9	NMR structure for Sp1 transcription factor duplex 5'-d(TGGGCGGGA) Descriptor: DNA (5'-D(*TP*CP*CP*CP*GP*CP*CP*CP*A)-3'), DNA (5'-D(*TP*GP*GP*GP*CP*GP*GP*GP*A)-3') Authors: Davis, E.V, Hennig, M, Arya, D.P. Deposit date: 2018-08-09 Release date: 2019-08-14 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: An NMR Structure Determination and Analysis of Four Sp1 Consensus Sequences To Be Published
3KF5	Structure of invertase from Schwanniomyces occidentalis Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Invertase Authors: Sanz-Aparicio, J, Polo, A. Deposit date: 2009-10-27 Release date: 2010-02-23 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Structural and kinetic analysis of Schwanniomyces occidentalis invertase reveals a new oligomerization pattern and the role of its supplementary domain in substrate binding J.Biol.Chem., 285, 2010
5YR5	Human methionine aminopeptidase type 1b (F309L mutant) in complex with Ovalicin Descriptor: 3,4-DIHYDROXY-2-METHOXY-4-METHYL-3-[2-METHYL-3-(3-METHYL-BUT-2-ENYL) -OXIRANYL]-CYCLOHEXANONE, COBALT (II) ION, Methionine aminopeptidase 1, ... Authors: Pillalamarri, V, Arya, T, Addlagatta, A. Deposit date: 2017-11-08 Release date: 2018-11-14 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Discovery of natural product ovalicin sensitive type 1 methionine aminopeptidases: molecular and structural basis. Biochem. J., 476, 2019
4I36	Crystal Structure of the Bacillus stearothermophilus Phosphofructokinase Mutant D12A Descriptor: 6-phosphofructokinase Authors: Mosser, R, Reddy, M, Bruning, J.B, Sacchettini, J.C, Reinhart, G.D. Deposit date: 2012-11-25 Release date: 2013-07-31 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Redefining the Role of the Quaternary Shift in Bacillus stearothermophilus Phosphofructokinase. Biochemistry, 52, 2013
3KDM	Crystal Structure of Human Anti-steroid Fab 5F2 in Complex with Testosterone Descriptor: Immunoglobulin heavy chain, Immunoglobulin light chain, TESTOSTERONE Authors: Niemi, M.H, Rouvinen, J. Deposit date: 2009-10-23 Release date: 2010-05-26 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.5 Å) Cite: The testosterone binding mechanism of an antibody derived from a naive human scFv library J.Mol.Recognit., 24, 2010
3KF3	Structure of fructofuranosidase from Schwanniomyces occidentalis complexed with fructose Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Invertase, beta-D-fructofuranose Authors: Sanz-Aparicio, J, Polo, A. Deposit date: 2009-10-27 Release date: 2010-02-23 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural and kinetic analysis of Schwanniomyces occidentalis invertase reveals a new oligomerization pattern and the role of its supplementary domain in substrate binding J.Biol.Chem., 285, 2010
3KDZ	X-ray crystal structure of a tyrosine aminomutase mutant construct with bound ligand Descriptor: Histidine ammonia-lyase, TYROSINE Authors: Cooke, H.A, Bruner, S.D. Deposit date: 2009-10-23 Release date: 2010-07-07 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Probing the active site of MIO-dependent aminomutases, key catalysts in the biosynthesis of beta-amino acids incorporated in secondary metabolites Biopolymers, 93, 2010

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