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6CMO
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BU of 6cmo by Molmil
Rhodopsin-Gi complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab Heavy chain, Fab light chain, ...
Authors:Kang, Y, Kuybeda, O, de Waal, P.W, Mukherjee, S, Van Eps, N, Dutka, P, Zhou, X.E, Bartesaghi, A, Erramilli, S, Morizumi, T, Gu, X, Yin, Y, Liu, P, Jiang, Y, Meng, X, Zhao, G, Melcher, K, Earnst, O.P, Kossiakoff, A.A, Subramaniam, S, Xu, H.E.
Deposit date:2018-03-05
Release date:2018-06-20
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Cryo-EM structure of human rhodopsin bound to an inhibitory G protein.
Nature, 558, 2018
6B46
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BU of 6b46 by Molmil
Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF1
Descriptor: Anti-CRISPR protein AcrF1, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy3, ...
Authors:Guo, T.W, Bartesaghi, A, Yang, H, Falconieri, V, Rao, P, Merk, A, Fox, T, Earl, L, Patel, D.J, Subramaniam, S.
Deposit date:2017-09-25
Release date:2017-10-18
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM Structures Reveal Mechanism and Inhibition of DNA Targeting by a CRISPR-Cas Surveillance Complex.
Cell, 171, 2017
6CRT
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BU of 6crt by Molmil
Arg65Gln Mutagenic E.coli PCK
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, Phosphoenolpyruvate carboxykinase (ATP)
Authors:Sokaribo, A.S, Cotelesage, J.H, Novakovski, B, Goldie, H, Sanders, D.
Deposit date:2018-03-19
Release date:2018-04-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.995 Å)
Cite:Arg65Gln Mutagenic E.coli PCK
To Be Published
6EBM
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BU of 6ebm by Molmil
The voltage-activated Kv1.2-2.1 paddle chimera channel in lipid nanodiscs, transmembrane domain of subunit alpha
Descriptor: Potassium voltage-gated channel subfamily A member 2,Potassium voltage-gated channel subfamily B member 2 chimera
Authors:Matthies, D, Bae, C, Fox, T, Bartesaghi, A, Subramaniam, S, Swartz, K.J.
Deposit date:2018-08-06
Release date:2018-08-22
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Single-particle cryo-EM structure of a voltage-activated potassium channel in lipid nanodiscs.
Elife, 7, 2018
6G2S
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Crystal structure of FimH in complex with a pentaflourinated biphenyl alpha D-mannoside
Descriptor: (2~{R},3~{S},4~{S},5~{S},6~{R})-2-(hydroxymethyl)-6-[4-[2,3,4,5,6-pentakis(fluoranyl)phenyl]phenoxy]oxane-3,4,5-triol, SULFATE ION, Type 1 fimbrin D-mannose specific adhesin
Authors:Jakob, R.P, Schoenemann, W, Cramer, J, Muehlethaler, T, Daetwyler, P, Zihlmann, P, Fiege, B, Sager, C.P, Smiesko, M, Rabbani, S, Eris, D, Schwardt, O, Maier, T, Ernst, B.
Deposit date:2018-03-23
Release date:2019-03-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Improvement of Aglycone pi-Stacking Yields Nanomolar to Sub-nanomolar FimH Antagonists.
Chemmedchem, 14, 2019
6G2R
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BU of 6g2r by Molmil
Crystal structure of FimH in complex with a tetraflourinated biphenyl alpha D-mannoside
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 4-[3-chloranyl-4-[(2~{R},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-phenyl]-2,3,5,6-tetrakis(fluoranyl)benzenecarbonitrile, SULFATE ION, ...
Authors:Jakob, R.P, Schoenemann, W, Cramer, J, Muehlethaler, T, Daetwyler, P, Zihlmann, P, Fiege, B, Sager, C.P, Smiesko, M, Rabbani, S, Eris, D, Schwardt, O, Maier, T, Ernst, B.
Deposit date:2018-03-23
Release date:2019-03-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Improvement of Aglycone pi-Stacking Yields Nanomolar to Sub-nanomolar FimH Antagonists.
Chemmedchem, 14, 2019
8YYO
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BU of 8yyo by Molmil
Crystal structure of TsaGH11 complexed with beta-D-xylopyranose (Data II)
Descriptor: ACETATE ION, Endo-1,4-beta-xylanase, beta-D-xylopyranose
Authors:Nam, K.H.
Deposit date:2024-04-04
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of TsaGH11 complexed with beta-D-xylopyranose (Data II)
To Be Published
8YEA
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BU of 8yea by Molmil
Room temperature structure of TsaGH11 determined by macromolecular crystallography
Descriptor: Endo-1,4-beta-xylanase
Authors:Nam, K.H.
Deposit date:2024-02-22
Release date:2024-03-06
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Room temperature structure of TsaGH11 determined by macromolecular crystallography
To Be Published
8YYN
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BU of 8yyn by Molmil
Crystal structure of TsaGH11 complexed with beta-D-xylopyranose (Data I)
Descriptor: ACETATE ION, Endo-1,4-beta-xylanase, beta-D-xylopyranose
Authors:Nam, K.H.
Deposit date:2024-04-04
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of TsaGH11 complexed with beta-D-xylopyranose (Data I)
To Be Published
9FS9
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BU of 9fs9 by Molmil
Self assembly domain of the surface layer protein of Viridibacillus arvi (aa 765-844)
Descriptor: BROMIDE ION, S-layer
Authors:Grininger, C, Sagmeister, T, Pavkov-Keller, T.
Deposit date:2024-06-20
Release date:2024-08-28
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:SymProFold: Structural prediction of symmetrical biological assemblies.
Nat Commun, 15, 2024
9FSA
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BU of 9fsa by Molmil
Cell wall anchoring domain of the surface layer protein of Methanococcus voltae (aa 24-75; 484-576)
Descriptor: S-layer protein
Authors:Grininger, C, Sagmeister, T, Pavkov-Keller, T.
Deposit date:2024-06-20
Release date:2024-08-28
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:SymProFold: Structural prediction of symmetrical biological assemblies.
Nat Commun, 15, 2024
1TJS
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BU of 1tjs by Molmil
E. COLI THYMIDYLATE SYNTHASE
Descriptor: PHOSPHATE ION, THYMIDYLATE SYNTHASE
Authors:Stout, T.J, Sage, C.R, Stroud, R.M.
Deposit date:1997-06-27
Release date:1998-07-01
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The additivity of substrate fragments in enzyme-ligand binding.
Structure, 6, 1998
1TDU
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BU of 1tdu by Molmil
E. COLI THYMIDYLATE SYNTHASE IN COMPLEX WITH CB3717 AND 2'-DEOXYURIDINE (DURD)
Descriptor: 10-PROPARGYL-5,8-DIDEAZAFOLIC ACID, 2'-DEOXYURIDINE, PHOSPHATE ION, ...
Authors:Stout, T.J, Sage, C.R, Stroud, R.M.
Deposit date:1997-06-25
Release date:1998-07-01
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The additivity of substrate fragments in enzyme-ligand binding.
Structure, 6, 1998
1PWH
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BU of 1pwh by Molmil
Rat Liver L-Serine Dehydratase- Complex with PYRIDOXYL-(O-METHYL-SERINE)-5-MONOPHOSPHATE
Descriptor: L-serine dehydratase, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-O-METHYL-L-SERINE, POTASSIUM ION
Authors:Yamada, T, Komoto, J, Takata, Y, Ogawa, H, Takusagawa, F.
Deposit date:2003-07-01
Release date:2003-12-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of serine dehydratase from rat liver.
Biochemistry, 42, 2003
1P1C
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BU of 1p1c by Molmil
Guanidinoacetate Methyltransferase with Gd ion
Descriptor: GADOLINIUM ION, Guanidinoacetate N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Komoto, J, Takusagawa, F.
Deposit date:2003-04-12
Release date:2003-04-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Monoclinic guanidinoacetate methyltransferase and gadolinium ion-binding characteristics.
Acta Crystallogr.,Sect.D, 59, 2003
1OZJ
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BU of 1ozj by Molmil
Crystal structure of Smad3-MH1 bound to DNA at 2.4 A resolution
Descriptor: SMAD 3, Smad binding element, ZINC ION
Authors:Chai, J, Wu, J.-W, Yan, N, Massague, J, Pavletich, N.P, Shi, Y.
Deposit date:2003-04-09
Release date:2004-03-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Features of a Smad3 MH1-DNA complex. Roles of water and zinc in DNA binding.
J.Biol.Chem., 278, 2003
1W7S
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BU of 1w7s by Molmil
Wild-Type Aequorea victoria Green Fluorescent Protein
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Van Thor, J.J, Georgiev, G.Y, Towrie, M, Sage, J.T.
Deposit date:2004-09-09
Release date:2005-07-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Ultrafast and Low Barrier Motions in the Photoreactions of the Green Fluorescent Protein
J.Biol.Chem., 280, 2005
1W7U
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BU of 1w7u by Molmil
Photoproduct of the Wild-Type Aequorea victoria Green Fluorescent Protein after structural annealing at 170K
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Van Thor, J.J, Georgiev, G.Y, Towrie, M, Sage, J.T.
Deposit date:2004-09-09
Release date:2005-07-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Ultrafast and Low Barrier Motions in the Photoreactions of the Green Fluorescent Protein
J.Biol.Chem., 280, 2005
1W7T
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BU of 1w7t by Molmil
Photoproduct of the Wild-Type Aequorea victoria Green Fluorescent Protein at 100 K
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Van Thor, J.J, Georgiev, G.Y, Towrie, M, Sage, J.T.
Deposit date:2004-09-09
Release date:2005-07-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Ultrafast and Low Barrier Motions in the Photoreactions of the Green Fluorescent Protein
J.Biol.Chem., 280, 2005
1PWE
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BU of 1pwe by Molmil
Rat Liver L-Serine Dehydratase Apo Enzyme
Descriptor: L-serine dehydratase
Authors:Yamada, T, Komoto, J, Takata, Y, Ogawa, H, Takusagawa, F.
Deposit date:2003-07-01
Release date:2003-12-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of serine dehydratase from rat liver.
Biochemistry, 42, 2003
1UXD
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BU of 1uxd by Molmil
Fructose repressor DNA-binding domain, NMR, 34 structures
Descriptor: FRUCTOSE REPRESSOR
Authors:Penin, F, Geourjon, C, Montserret, R, Bockmann, A, Lesage, A, Yang, Y, Bonod-Bidaud, C, Cortay, J.C, Negre, D, Cozzone, A.J, Deleage, G.
Deposit date:1996-12-26
Release date:1997-04-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Three-dimensional structure of the DNA-binding domain of the fructose repressor from Escherichia coli by 1H and 15N NMR.
J.Mol.Biol., 270, 1997
1AAF
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BU of 1aaf by Molmil
NUCLEOCAPSID ZINC FINGERS DETECTED IN RETROVIRUSES: EXAFS STUDIES ON INTACT VIRUSES AND THE SOLUTION-STATE STRUCTURE OF THE NUCLEOCAPSID PROTEIN FROM HIV-1
Descriptor: HIV-1 NUCLEOCAPSID PROTEIN, ZINC ION
Authors:Summers, M.F, Henderson, L.E, Chance, M.R, Bess Junior, J.W, South, T.L, Blake, P.R, Sagi, I, Perez-Alvarado, G, Sowder, R.C, Hare, D.R, Arthur, L.O.
Deposit date:1992-04-06
Release date:1994-01-31
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Nucleocapsid zinc fingers detected in retroviruses: EXAFS studies of intact viruses and the solution-state structure of the nucleocapsid protein from HIV-1.
Protein Sci., 1, 1992
1VB6
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BU of 1vb6 by Molmil
Crystal Structure of the heme PAS sensor domain of Ec DOS (oxygen-bound form)
Descriptor: Heme pas sensor protein, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kurokawa, H, Watanabe, M, Sagami, I, Mikami, B, Shimizu, T.
Deposit date:2004-02-24
Release date:2005-04-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structure of oxygen-bound form of a Heme PAS domain of Ec DOS
To be Published
1TRG
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BU of 1trg by Molmil
E. COLI THYMIDYLATE SYNTHASE IN SYMMETRIC COMPLEX WITH CB3717 AND 2'-DEOXYURIDINE 5'-MONOPHOSPHATE (DUMP)
Descriptor: 10-PROPARGYL-5,8-DIDEAZAFOLIC ACID, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE
Authors:Stout, T.J, Sage, C.R, Stroud, R.M.
Deposit date:1998-05-21
Release date:1998-08-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The additivity of substrate fragments in enzyme-ligand binding.
Structure, 6, 1998
1P1B
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BU of 1p1b by Molmil
Guanidinoacetate methyltransferase
Descriptor: Guanidinoacetate N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Komoto, J, Takusagawa, F.
Deposit date:2003-04-12
Release date:2003-04-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Monoclinic guanidinoacetate methyltransferase and gadolinium ion-binding characteristics.
Acta Crystallogr.,Sect.D, 59, 2003

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