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3RLC
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BU of 3rlc by Molmil
Crystal structure of the read-through domain from bacteriophage Qbeta A1 protein, hexagonal crystal form
Descriptor: A1 protein, TETRAETHYLENE GLYCOL
Authors:Rumnieks, J, Tars, K.
Deposit date:2011-04-19
Release date:2011-09-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the read-through domain from bacteriophage Qbeta A1 protein
Protein Sci., 20, 2011
3R5B
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BU of 3r5b by Molmil
Pseudomonas aeruginosa DapD (PA3666) in complex with L-2-aminopimelate
Descriptor: (2S)-2-aminoheptanedioic acid, Tetrahydrodipicolinate N-succinyletransferase
Authors:Sandalova, T, Schnell, R, Schneider, G.
Deposit date:2011-03-18
Release date:2012-01-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Tetrahydrodipicolinate N-succinyltransferase and dihydrodipicolinate synthase from Pseudomonas aeruginosa: structure analysis and gene deletion.
Plos One, 7, 2012
3Q71
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BU of 3q71 by Molmil
Human parp14 (artd8) - macro domain 2 in complex with adenosine-5-diphosphoribose
Descriptor: Poly [ADP-ribose] polymerase 14, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Karlberg, T, Siponen, M.I, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Ekblad, T, Flodin, S, Flores, A, Graslund, S, Kotenyova, T, Kouznetsova, E, Moche, M, Nordlund, P, Nyman, T, Persson, C, Sehic, A, Thorsell, A.G, Tresaugues, L, Wahlberg, E, Weigelt, J, Welin, M, Schuler, H, Structural Genomics Consortium (SGC)
Deposit date:2011-01-04
Release date:2011-01-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Recognition of Mono-ADP-Ribosylated ARTD10 Substrates by ARTD8 Macrodomains.
Structure, 21, 2013
3R5D
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BU of 3r5d by Molmil
Pseudomonas aeruginosa DapD (PA3666) apoprotein
Descriptor: GLYCEROL, Tetrahydrodipicolinate N-succinyletransferase
Authors:Sandalova, T, Schnell, R, Schneider, G.
Deposit date:2011-03-18
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Tetrahydrodipicolinate N-succinyltransferase and dihydrodipicolinate synthase from Pseudomonas aeruginosa: structure analysis and gene deletion.
Plos One, 7, 2012
3S0Q
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BU of 3s0q by Molmil
Peptidase module of the peptidoglycan hydrolase RipA (Rv1477) from Mycobacterium tuberculosis, catalytic site mutant (Cys383Ala) at 1.45 resolution
Descriptor: INVASION PROTEIN
Authors:Both, D, Schnell, R, Schneider, G.
Deposit date:2011-05-13
Release date:2011-08-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Peptidoglycan Remodeling in Mycobacterium tuberculosis: Comparison of Structures and Catalytic Activities of RipA and RipB.
J.Mol.Biol., 413, 2011
4D7Z
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BU of 4d7z by Molmil
E. coli L-aspartate-alpha-decarboxylase mutant N72Q to a resolution of 1.9 Angstroms
Descriptor: ASPARTATE 1-DECARBOXYLASE ALPHA CHAIN, ASPARTATE 1-DECARBOXYLASE BETA CHAIN, DI(HYDROXYETHYL)ETHER, ...
Authors:Bravo, J.P.K, Monteiro, D.C.F, Webb, M.E, Pearson, A.R.
Deposit date:2014-12-02
Release date:2016-01-13
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Structure of the E. Coli L-Aspartate-Alpha-Decarboxylase Mutant N72Q to a Resolution of 1.9 Angstroms
To be Published
9F19
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BU of 9f19 by Molmil
Human USP30 chimera in complex with NK036 inhibitor
Descriptor: 4-fluoranyl-~{N}-[(2~{S})-1-[[4-[(2-methyl-1-oxidanyl-propan-2-yl)sulfamoyl]phenyl]amino]-1-oxidanylidene-3-phenyl-propan-2-yl]benzamide, Ubiquitin carboxyl-terminal hydrolase 30,Ubiquitin carboxyl-terminal hydrolase 14,Ubiquitin carboxyl-terminal hydrolase 35
Authors:Kazi, N.H, Gersch, M.
Deposit date:2024-04-18
Release date:2025-03-19
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Chimeric deubiquitinase engineering reveals structural basis for specific inhibition of the mitophagy regulator USP30.
Nat.Struct.Mol.Biol., 2025
9F6G
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BU of 9f6g by Molmil
Human USP30 chimera bound to Ubiquitin-PA
Descriptor: Polyubiquitin-B, Ubiquitin carboxyl-terminal hydrolase 30,Ubiquitin carboxyl-terminal hydrolase 14,Ubiquitin carboxyl-terminal hydrolase 35, prop-2-en-1-amine
Authors:Kazi, N.H, Gersch, M.
Deposit date:2024-05-01
Release date:2025-03-19
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Chimeric deubiquitinase engineering reveals structural basis for specific inhibition of the mitophagy regulator USP30.
Nat.Struct.Mol.Biol., 2025
1I6M
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BU of 1i6m by Molmil
1.7 HIGH RESOLUTION EXPERIMENTAL PHASES FOR TRYPTOPHANYL-TRNA SYNTHETASE COMPLEXED WITH TRYPTOPHANYL-5'AMP
Descriptor: AMMONIUM ION, GLYCEROL, SULFATE ION, ...
Authors:Retailleau, P, Carter, C.W.
Deposit date:2001-03-02
Release date:2001-11-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:High-resolution experimental phases for tryptophanyl-tRNA synthetase (TrpRS) complexed with tryptophanyl-5'AMP.
Acta Crystallogr.,Sect.D, 57, 2001
9EUX
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BU of 9eux by Molmil
Glycoside hydrolase familiy 191 enzyme from Thermotoga maritima
Descriptor: Uncharacterized protein TM_1410
Authors:Roth, C.
Deposit date:2024-03-28
Release date:2025-04-09
Last modified:2025-04-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of alpha-galactosaminidases from the GH114 family
To Be Published
9FBU
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BU of 9fbu by Molmil
X-ray structure of the iGluSnFR3 in complex with L-glutamate
Descriptor: GLUTAMIC ACID, Periplasmic binding transport protein,Green fluorescent protein
Authors:Tarnawski, M, Hiblot, J, Leippe, P.
Deposit date:2024-05-14
Release date:2025-04-02
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray structure of the iGluSnFR3 in complex with L-glutamate
To Be Published
9EUZ
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BU of 9euz by Molmil
Glycoside hydrolase family 191 enzyme from Thermotoga maritima
Descriptor: Uncharacterized protein TM_1410
Authors:Roth, C.
Deposit date:2024-03-28
Release date:2025-04-09
Last modified:2025-04-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Glycoside hydrolase family 191 enzyme from Thermotoga maritima
To Be Published
8OZB
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BU of 8ozb by Molmil
Crystal structure of Nup35-Nb complex
Descriptor: Nucleoporin NUP35, Nup35 nanobody
Authors:Srinivasan, V.
Deposit date:2023-05-08
Release date:2024-02-28
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:A checkpoint function for Nup98 in nuclear pore formation suggested by novel inhibitory nanobodies.
Embo J., 43, 2024
9F0P
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BU of 9f0p by Molmil
VIM-2 in complex with GKV61 (5c) - dynamically chiral phosphonic acid-type metallo-beta-lactamase inhibitors
Descriptor: FORMIC ACID, Metallo-beta-lactamase type 2, ZINC ION, ...
Authors:Bartels, K, Prester, A, Bosman, R, Gulyas, K.V, Erdelyi, M, Schulz, E.C.
Deposit date:2024-04-17
Release date:2025-04-30
Last modified:2025-05-07
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Dynamically chiral phosphonic acid-type metallo-beta-lactamase inhibitors.
Commun Chem, 8, 2025
9F0R
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BU of 9f0r by Molmil
VIM-2 in complex with GKV65 (5g) - dynamically chiral phosphonic acid-type metallo-beta-lactamase inhibitors
Descriptor: FORMIC ACID, MAGNESIUM ION, Metallo-beta-lactamase type 2, ...
Authors:Bosman, R, Prester, A, Bartels, K, Gulyas, K.V, Erdelyi, M, Schulz, E.C.
Deposit date:2024-04-17
Release date:2025-04-30
Last modified:2025-05-07
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Dynamically chiral phosphonic acid-type metallo-beta-lactamase inhibitors.
Commun Chem, 8, 2025
9F0Q
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BU of 9f0q by Molmil
VIM-2 in complex with GKV53 (5d) - dynamically chiral phosphonic acid-type metallo-beta-lactamase inhibitors
Descriptor: FORMIC ACID, Metallo-beta-lactamase type 2, ZINC ION, ...
Authors:Bartels, K, Prester, A, Bosman, R, Gulyas, K.V, Erdelyi, M, Schulz, E.C.
Deposit date:2024-04-17
Release date:2025-04-30
Last modified:2025-05-07
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Dynamically chiral phosphonic acid-type metallo-beta-lactamase inhibitors.
Commun Chem, 8, 2025
1IGX
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BU of 1igx by Molmil
Crystal Structure of Eicosapentanoic Acid Bound in the Cyclooxygenase Channel of Prostaglandin Endoperoxide H Synthase-1.
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5,8,11,14,17-EICOSAPENTAENOIC ACID, ...
Authors:Malkowski, M.G, Thuresson, E.D, Smith, W.L, Garavito, R.M.
Deposit date:2001-04-18
Release date:2001-12-12
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of eicosapentaenoic and linoleic acids in the cyclooxygenase site of prostaglandin endoperoxide H synthase-1.
J.Biol.Chem., 276, 2001
9F0S
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BU of 9f0s by Molmil
VIM-2 in complex with GKV63 (5j) - dynamically chiral phosphonic acid-type metallo-beta-lactamase inhibitors
Descriptor: FORMIC ACID, Metallo-beta-lactamase type 2, ZINC ION, ...
Authors:Bosman, R, Prester, A, Bartels, K, Gulyas, K.V, Erdelyi, M, Schulz, E.C.
Deposit date:2024-04-17
Release date:2025-04-30
Last modified:2025-05-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Dynamically chiral phosphonic acid-type metallo-beta-lactamase inhibitors.
Commun Chem, 8, 2025
4D09
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BU of 4d09 by Molmil
PDE2a catalytic domain in complex with a brain penetrant inhibitor
Descriptor: CGMP-DEPENDENT 3', 5'-CYCLIC PHOSPHODIESTERASE, MAGNESIUM ION, ...
Authors:Buijnsters, P, Andres, J.I, DeAngelis, M, Langlois, X, Rombouts, F, Sanderson, W, Tresadern, G, Trabanco, A, VanHoof, G, VanRoosbroeck, Y.
Deposit date:2014-04-24
Release date:2014-08-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-Based Design of a Potent, Selective, and Brain Penetrating Pde2 Inhibitor with Demonstrated Target Engagement.
Acs Med.Chem.Lett., 5, 2014
9G8N
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BU of 9g8n by Molmil
80S-bound human Ski2-exosome complex
Descriptor: CrPV-IRES RNA, DIS3-like exonuclease 1, Exosome complex component CSL4, ...
Authors:Koegel, A, Keidel, A, Loukeri, M.J, Kuhn, C.C, Langer, L.M, Schaefer, I.B, Conti, E.
Deposit date:2024-07-23
Release date:2024-10-16
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of mRNA decay by the human exosome-ribosome supercomplex.
Nature, 635, 2024
9G8Q
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BU of 9g8q by Molmil
40S-bound human SKI238 complex in the open state (Gatekeeping module)
Descriptor: Helicase SKI2W, Superkiller complex protein 3, WD repeat-containing protein 61
Authors:Koegel, A, Keidel, A, Loukeri, M.J, Kuhn, C.C, Langer, L.M, Schaefer, I.B, Conti, E.
Deposit date:2024-07-23
Release date:2024-10-16
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural basis of mRNA decay by the human exosome-ribosome supercomplex.
Nature, 635, 2024
9G8P
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BU of 9g8p by Molmil
40S-bound human SKI2-exosome complex
Descriptor: CrPV-IRES RNA, DIS3-like exonuclease 1, Exosome complex component CSL4, ...
Authors:Koegel, A, Keidel, A, Loukeri, M.J, Kuhn, C.C, Langer, L.M, Schaefer, I.B, Conti, E.
Deposit date:2024-07-23
Release date:2024-10-16
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structural basis of mRNA decay by the human exosome-ribosome supercomplex.
Nature, 635, 2024
9G8R
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BU of 9g8r by Molmil
human SKI7-SKI238 complex in the open state
Descriptor: Isoform 2 of HBS1-like protein, Superkiller complex protein 2, Superkiller complex protein 3, ...
Authors:Koegel, A, Keidel, A, Loukeri, M.J, Kuhn, C.C, Langer, L.M, Schaefer, I.B, Conti, E.
Deposit date:2024-07-23
Release date:2024-10-16
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of mRNA decay by the human exosome-ribosome supercomplex.
Nature, 635, 2024
9G2J
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BU of 9g2j by Molmil
Thaumatin structure determined using SoS chip at ID29 (serial crystallography)
Descriptor: L(+)-TARTARIC ACID, Thaumatin I
Authors:Doak, R.B, Shoeman, R.L, Gorel, A, Barends, T.R.M, Schlichting, I.
Deposit date:2024-07-11
Release date:2024-12-18
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Sheet-on-sheet fixed target data collection devices for serial crystallography at synchrotron and XFEL sources.
J.Appl.Crystallogr., 57, 2024
8PSM
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BU of 8psm by Molmil
Asymmetric unit of the yeast fatty acid synthase in the non-rotated state with ACP at the malonyl/palmitoyl transferase domain (FASx sample)
Descriptor: 4'-PHOSPHOPANTETHEINE, FLAVIN MONONUCLEOTIDE, Fatty acid synthase subunit alpha, ...
Authors:Singh, K, Bunzel, G, Graf, B, Yip, K.M, Stark, H, Chari, A.
Deposit date:2023-07-13
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Reconstruction of a fatty acid synthesis cycle from acyl carrier protein and cofactor structural snapshots.
Cell, 186, 2023

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PDB entries from 2025-07-09

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