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3KGK
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Crystal structure of ArsD
Descriptor: Arsenical resistance operon trans-acting repressor arsD
Authors:Ye, J, Rosen, B.P.
Deposit date:2009-10-29
Release date:2010-02-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The 1.4 A crystal structure of the ArsD arsenic metallochaperone provides insights into its interaction with the ArsA ATPase.
Biochemistry, 49, 2010
3NB8
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BU of 3nb8 by Molmil
Crystal structure of oxidized H88Q Synechocystis sp. PCYA
Descriptor: 1,2-ETHANEDIOL, BILIVERDINE IX ALPHA, Phycocyanobilin:ferredoxin oxidoreductase
Authors:Gae, D.D.
Deposit date:2010-06-03
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural basis for hydration dynamics in radical stabilization of bilin reductase mutants.
Biochemistry, 49, 2010
6IRW
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BU of 6irw by Molmil
Crystal structure of the human cap-specific adenosine methyltransferase bound to SAH
Descriptor: Phosphorylated CTD-interacting factor 1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O.
Deposit date:2018-11-14
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Cap-specific terminal N 6 -methylation of RNA by an RNA polymerase II-associated methyltransferase.
Science, 363, 2019
2Q81
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Crystal Structure of the Miz-1 BTB/POZ domain
Descriptor: Miz-1 protein, TETRAETHYLENE GLYCOL
Authors:Stead, M.A, Trinh, C.H, Garnett, J.A, Carr, S.B, Edwards, T.A, Wright, S.C.
Deposit date:2007-06-08
Release date:2007-11-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Beta-Sheet Interaction Interface Directs the Tetramerisation of the Miz-1 POZ Domain
J.Mol.Biol., 373, 2007
3P8N
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BU of 3p8n by Molmil
Crystal structure of HCV NS3/NS4A protease complexed with BI 201335
Descriptor: HCV non-structural protein 4A, HCV serine protease NS3, N-[(cyclopentyloxy)carbonyl]-3-methyl-L-valyl-(4R)-4-[(8-bromo-7-methoxy-2-{2-[(2-methylpropanoyl)amino]-1,3-thiazol-4-yl}quinolin-4-yl)oxy]-N-[(1R,2S)-1-carboxy-2-ethenylcyclopropyl]-L-prolinamide, ...
Authors:Lemke, C.T.
Deposit date:2010-10-14
Release date:2011-01-26
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Combined X-ray, NMR, and kinetic analyses reveal uncommon binding characteristics of the hepatitis C virus NS3-NS4A protease inhibitor BI 201335.
J.Biol.Chem., 286, 2011
8YFL
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BU of 8yfl by Molmil
crystal structure of FIP200 claw/TNIP1_FIR_pS122pS123
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCEROL, RB1-inducible coiled-coil protein 1, ...
Authors:Lv, M.Q, Wu, S.M.
Deposit date:2024-02-24
Release date:2024-08-14
Last modified:2024-08-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis for TNIP1 binding to FIP200 during mitophagy.
J.Biol.Chem., 300, 2024
3DFX
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BU of 3dfx by Molmil
Opposite GATA DNA binding
Descriptor: DNA (5'-D(*DAP*DAP*DGP*DGP*DTP*DTP*DAP*DTP*DCP*DTP*DCP*DTP*DGP*DAP*DTP*DTP*DTP*DAP*DTP*DC)-3'), DNA (5'-D(*DTP*DTP*DGP*DAP*DTP*DAP*DAP*DAP*DTP*DCP*DAP*DGP*DAP*DGP*DAP*DTP*DAP*DAP*DCP*DC)-3'), Trans-acting T-cell-specific transcription factor GATA-3, ...
Authors:Bates, D.L, Kim, G.K, Guo, L, Chen, L.
Deposit date:2008-06-12
Release date:2008-07-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of multiple GATA zinc fingers bound to DNA reveal new insights into DNA recognition and self-association by GATA.
J.Mol.Biol., 381, 2008
2YGX
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BU of 2ygx by Molmil
Structure of the mixed-function P450 MycG in P21 space group
Descriptor: GLYCEROL, P-450-LIKE PROTEIN, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Li, S, Kells, P.M, Rutaganira, F.U, Sherman, D.H, Podust, L.M.
Deposit date:2011-04-22
Release date:2012-02-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Substrate Recognition by the Multifunctional Cytochrome P450 Mycg in Mycinamicin Hydroxylation and Epoxidation Reactions.
J.Biol.Chem., 287, 2012
2JX8
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Solution structure of hPCIF1 WW domain
Descriptor: Phosphorylated CTD-interacting factor 1
Authors:Kouno, T, Iwamoto, Y, Hirose, Y, Aizawa, T, Demura, M, Kawano, K, Ohkuma, Y, Mizuguchi, M.
Deposit date:2007-11-09
Release date:2008-11-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:1H, 13C, and 15N resonance assignments of hPCIF1 WW domain
To be Published
6M62
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BU of 6m62 by Molmil
Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.
Descriptor: 60S ribosomal protein L11-A, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ...
Authors:Li, Y, Micic, J.
Deposit date:2020-03-12
Release date:2020-08-26
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Coupling of 5S RNP rotation with maturation of functional centers during large ribosomal subunit assembly.
Nat Commun, 11, 2020
2YCA
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BU of 2yca by Molmil
Mixed-function P450 MycG in complex with mycinamicin III in P21212 space group
Descriptor: GLYCEROL, MYCINAMICIN III, P-450-LIKE PROTEIN, ...
Authors:Li, S, Kells, P.M, Sherman, D.H, Podust, L.M.
Deposit date:2011-03-12
Release date:2012-03-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Substrate Recognition by the Multifunctional Cytochrome P450 Mycg in Mycinamicin Hydroxylation and Epoxidation Reactions.
J.Biol.Chem., 287, 2012
2ITK
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BU of 2itk by Molmil
human Pin1 bound to D-PEPTIDE
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, D-Peptide, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Noel, J.P, Zhang, Y.
Deposit date:2006-10-19
Release date:2007-05-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural basis for high-affinity peptide inhibition of human Pin1.
Acs Chem.Biol., 2, 2007
2ZYD
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BU of 2zyd by Molmil
Dimeric 6-phosphogluconate dehydrogenase complexed with glucose
Descriptor: 6-phosphogluconate dehydrogenase, decarboxylating, D-glucose
Authors:Chen, Y.-Y, Ko, T.-P, Lo, L.-P, Lin, C.-H, Wang, A.H.-J.
Deposit date:2009-01-19
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conformational changes associated with cofactor/substrate binding of 6-phosphogluconate dehydrogenase from Escherichia coli and Klebsiella pneumoniae: Implications for enzyme mechanism
J.Struct.Biol., 169, 2010
4Q4N
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BU of 4q4n by Molmil
Structure of the Resuscitation Promoting Factor Interacting protein RipA mutated at H432
Descriptor: Peptidoglycan endopeptidase RipA
Authors:Squeglia, F, Ruggiero, A, Romano, M, Vitagliano, L, Berisio, R.
Deposit date:2014-04-15
Release date:2014-09-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Mutational and structural study of RipA, a key enzyme in Mycobacterium tuberculosis cell division: evidence for the L-to-D inversion of configuration of the catalytic cysteine.
Acta Crystallogr.,Sect.D, 70, 2014
4Q4T
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BU of 4q4t by Molmil
Structure of the Resuscitation Promoting Factor Interacting protein RipA mutated at E444
Descriptor: FORMIC ACID, GLYCEROL, Peptidoglycan endopeptidase RipA
Authors:Squeglia, F, Ruggiero, A, Romano, M, Vitagliano, L, Berisio, R.
Deposit date:2014-04-15
Release date:2014-09-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Mutational and structural study of RipA, a key enzyme in Mycobacterium tuberculosis cell division: evidence for the L-to-D inversion of configuration of the catalytic cysteine.
Acta Crystallogr.,Sect.D, 70, 2014
2ZYG
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BU of 2zyg by Molmil
Apo-form of dimeric 6-phosphogluconate dehydrogenase
Descriptor: 6-phosphogluconate dehydrogenase, decarboxylating
Authors:Chen, Y.-Y, Ko, T.-P, Lo, L.-P, Lin, C.-H, Wang, A.H.-J.
Deposit date:2009-01-21
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conformational changes associated with cofactor/substrate binding of 6-phosphogluconate dehydrogenase from Escherichia coli and Klebsiella pneumoniae: Implications for enzyme mechanism
J.Struct.Biol., 169, 2010
4Q4G
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BU of 4q4g by Molmil
Structure of the Resuscitation Promoting Factor Interacting protein RipA mutated at C383
Descriptor: Peptidoglycan endopeptidase RipA
Authors:Berisio, R.
Deposit date:2014-04-14
Release date:2014-09-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Mutational and structural study of RipA, a key enzyme in Mycobacterium tuberculosis cell division: evidence for the L-to-D inversion of configuration of the catalytic cysteine.
Acta Crystallogr.,Sect.D, 70, 2014
2ZYA
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BU of 2zya by Molmil
Dimeric 6-phosphogluconate dehydrogenase complexed with 6-phosphogluconate
Descriptor: 6-PHOSPHOGLUCONIC ACID, 6-phosphogluconate dehydrogenase, decarboxylating
Authors:Chen, Y.-Y, Ko, T.-P, Lo, L.-P, Lin, C.-H, Wang, A.H.-J.
Deposit date:2009-01-19
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Conformational changes associated with cofactor/substrate binding of 6-phosphogluconate dehydrogenase from Escherichia coli and Klebsiella pneumoniae: Implications for enzyme mechanism
J.Struct.Biol., 169, 2010
2J4O
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BU of 2j4o by Molmil
Structure of TAB1
Descriptor: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-INTERACTING PROTEIN 1
Authors:van Aalten, D.
Deposit date:2006-09-01
Release date:2006-09-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Tak1-Binding Protein 1 is a Pseudophosphatase.
Biochem.J., 399, 2006
2J5D
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BU of 2j5d by Molmil
NMR structure of BNIP3 transmembrane domain in lipid bicelles
Descriptor: BCL2/ADENOVIRUS E1B 19 KDA PROTEIN-INTERACTING PROTEIN 3
Authors:Bocharov, E.V, Pustovalova, Y.E, Volynsky, P.E, Maslennikov, I.V, Goncharuk, M.V, Ermolyuk, Y.S, Arseniev, A.S.
Deposit date:2006-09-14
Release date:2007-04-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Unique dimeric structure of BNip3 transmembrane domain suggests membrane permeabilization as a cell death trigger.
J. Biol. Chem., 282, 2007
2IO5
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BU of 2io5 by Molmil
Crystal structure of the CIA- histone H3-H4 complex
Descriptor: ASF1A protein, Histone H3.1, Histone H4
Authors:Natsume, R, Akai, Y, Horikoshi, M, Senda, T.
Deposit date:2006-10-10
Release date:2007-02-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure and function of the histone chaperone CIA/ASF1 complexed with histones H3 and H4.
Nature, 446, 2007
3MMW
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BU of 3mmw by Molmil
Crystal structure of endoglucanase Cel5A from the hyperthermophilic Thermotoga maritima
Descriptor: CADMIUM ION, Endoglucanase
Authors:Pereira, J.H, Chen, Z, McAndrew, R.P, Sapra, R, Chhabra, S.R, Sale, K.L.
Deposit date:2010-04-20
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Biochemical characterization and crystal structure of endoglucanase Cel5A from the hyperthermophilic Thermotoga maritima.
J.Struct.Biol., 172, 2010
2Y98
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Structure of the mixed-function P450 MycG in complex with mycinamicin IV in P21212 space group
Descriptor: CHLORIDE ION, GLYCEROL, MYCINAMICIN IV, ...
Authors:Li, S, Kells, P.M, Sherman, D.H, Podust, L.M.
Deposit date:2011-02-12
Release date:2012-02-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Substrate Recognition by the Multifunctional Cytochrome P450 Mycg in Mycinamicin Hydroxylation and Epoxidation Reactions.
J.Biol.Chem., 287, 2012
3MMU
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BU of 3mmu by Molmil
Crystal structure of endoglucanase Cel5A from the hyperthermophilic Thermotoga maritima
Descriptor: CADMIUM ION, Endoglucanase, NICKEL (II) ION
Authors:Pereira, J.H, Chen, Z, McAndrew, R.P, Sapra, R, Chhabra, S.R, Sale, K.L, Simmons, B.A, Adams, P.D.
Deposit date:2010-04-20
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Biochemical characterization and crystal structure of endoglucanase Cel5A from the hyperthermophilic Thermotoga maritima.
J.Struct.Biol., 172, 2010
4R6I
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AtxA protein, a virulence regulator from Bacillus anthracis.
Descriptor: Anthrax toxin expression trans-acting positive regulator, DODECYL-BETA-D-MALTOSIDE
Authors:Osipiuk, J, Horton, L.B, Koehler, T.M, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-08-25
Release date:2014-10-22
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of Bacillus anthracis virulence regulator AtxA and effects of phosphorylated histidines on multimerization and activity.
Mol.Microbiol., 95, 2015

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