Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3C63
DownloadVisualize
BU of 3c63 by Molmil
Tetrameric Cytochrome cb562 (K34/H59/D62/H63/H73/A74/H77) Assembly Stabilized by Interprotein Zinc Coordination
Descriptor: CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, Soluble cytochrome b562, ...
Authors:Tezcan, F.A, Salgado, E.N, Lewis, R.A, Faraone-Mennella, J.
Deposit date:2008-02-02
Release date:2008-05-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Metal-mediated self-assembly of protein superstructures: influence of secondary interactions on protein oligomerization and aggregation.
J.Am.Chem.Soc., 130, 2008
3C62
DownloadVisualize
BU of 3c62 by Molmil
Tetrameric Cytochrome cb562 (H59/D62/H63/H73/A74/H77) Assembly Stabilized by Interprotein Zinc Coordination
Descriptor: CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, Soluble cytochrome b562, ...
Authors:Tezcan, F.A, Salgado, E.N, Lewis, R.A, Faraone-Mennella, J.
Deposit date:2008-02-02
Release date:2008-05-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Metal-mediated self-assembly of protein superstructures: influence of secondary interactions on protein oligomerization and aggregation.
J.Am.Chem.Soc., 130, 2008
8TJU
DownloadVisualize
BU of 8tju by Molmil
Tetrahymena Ribozyme scaffolded TABV xrRNA
Descriptor: DNA/RNA (416-MER), MAGNESIUM ION
Authors:Langeberg, C.J, Kieft, J.S.
Deposit date:2023-07-24
Release date:2023-11-01
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:A generalizable scaffold-based approach for structure determination of RNAs by cryo-EM.
Nucleic Acids Res., 51, 2023
6VE3
DownloadVisualize
BU of 6ve3 by Molmil
Tetradecameric PilQ from Pseudomonas aeruginosa
Descriptor: Fimbrial assembly protein PilQ
Authors:McCallum, M, Tammam, S, Rubinstein, J.L, Burrows, L.L, Howell, P.L.
Deposit date:2019-12-28
Release date:2020-12-23
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:CryoEM map of Pseudomonas aeruginosa PilQ enables structural characterization of TsaP.
Structure, 29, 2021
8X5N
DownloadVisualize
BU of 8x5n by Molmil
Tetramer Gabija with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Endonuclease GajA, Gabija protein GajB, ...
Authors:Li, J, Wang, Z, Wang, L.
Deposit date:2023-11-17
Release date:2024-02-28
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structures and activation mechanism of the Gabija anti-phage system.
Nature, 629, 2024
5D19
DownloadVisualize
BU of 5d19 by Molmil
Crystal structure of Mycobacterium tuberculosis Rv0302, form II
Descriptor: TetR family transcriptional regulator
Authors:Chou, T.-H, Delmar, J, Su, C.-C, Yu, E.
Deposit date:2015-08-04
Release date:2015-10-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.655 Å)
Cite:Crystal structure of the Mycobacterium tuberculosis transcriptional regulator Rv0302.
Protein Sci., 2015
4OBI
DownloadVisualize
BU of 4obi by Molmil
Crystal structure of a DUF1312 family protein (EF3258) from Enterococcus faecalis V583 at 1.73 A resolution
Descriptor: TETRAETHYLENE GLYCOL, Uncharacterized protein, ZINC ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-01-07
Release date:2014-02-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.734 Å)
Cite:Crystal structure of a hypothetical protein (EF3258) from Enterococcus faecalis V583 at 1.73 A resolution
To be published
7PQ8
DownloadVisualize
BU of 7pq8 by Molmil
Crystal structure of Campylobacter jejuni DsbA1
Descriptor: TETRAETHYLENE GLYCOL, Thiol:disulfide interchange protein DsbA
Authors:Orlikowska, M, Bocian-Ostrzycka, K.M, Banas, A.M, Jagusztyn-Krynicka, E.K.
Deposit date:2021-09-16
Release date:2021-12-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.329 Å)
Cite:Interplay between DsbA1, DsbA2 and C8J_1298 Periplasmic Oxidoreductases of Campylobacter jejuni and Their Impact on Bacterial Physiology and Pathogenesis.
Int J Mol Sci, 22, 2021
7PQ7
DownloadVisualize
BU of 7pq7 by Molmil
Crystal structure of Campylobacter jejuni DsbA1
Descriptor: TETRAETHYLENE GLYCOL, TRIETHYLENE GLYCOL, Thiol:disulfide interchange protein DsbA
Authors:Wilk, P, Orlikowska, M, Banas, A.M, Bocian-Ostrzycka, K.M, Jagusztyn-Krynicka, E.K.
Deposit date:2021-09-16
Release date:2021-12-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Interplay between DsbA1, DsbA2 and C8J_1298 Periplasmic Oxidoreductases of Campylobacter jejuni and Their Impact on Bacterial Physiology and Pathogenesis.
Int J Mol Sci, 22, 2021
8CBX
DownloadVisualize
BU of 8cbx by Molmil
Crystal Structure of Anti-Cortisol Fab fragment
Descriptor: TETRAETHYLENE GLYCOL, anti-cortisol (17) Fab (heavy chain), anti-cortisol (17) Fab (light chain)
Authors:Eronen, V, Rouvinen, J, Hakulinen, N.
Deposit date:2023-01-26
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insight to elucidate the binding specificity of the anti-cortisol Fab fragment with glucocorticoids.
J.Struct.Biol., 215, 2023
7NH2
DownloadVisualize
BU of 7nh2 by Molmil
Crystal structure of Toxoplasma CPSF4-YTH domain bound to m6A
Descriptor: TETRAETHYLENE GLYCOL, Zinc finger (CCCH type) motif-containing protein, ~{N},9-dimethylpurin-6-amine
Authors:Swale, C, Bowler, M.W.
Deposit date:2021-02-09
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:A plant-like mechanism coupling m6A reading to polyadenylation safeguards transcriptome integrity and developmental gene partitioning in Toxoplasma .
Elife, 10, 2021
6VE2
DownloadVisualize
BU of 6ve2 by Molmil
Tetradecameric PilQ bound by TsaP heptamer from Pseudomonas aeruginosa
Descriptor: Fimbrial assembly protein PilQ, LysM domain-containing protein
Authors:McCallum, M, Tammam, S, Rubinstein, J.L, Burrows, L.L, Howell, P.L.
Deposit date:2019-12-28
Release date:2020-12-23
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:CryoEM map of Pseudomonas aeruginosa PilQ enables structural characterization of TsaP.
Structure, 29, 2021
8WC5
DownloadVisualize
BU of 8wc5 by Molmil
Cryo-EM structure of the TMA-bound mTAAR1-Gs complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
Authors:Rong, N.K, Guo, L.L, Zhang, M.H, Li, Q, Yang, F, Sun, J.P.
Deposit date:2023-09-11
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural and signaling mechanisms of TAAR1 enabled preferential agonist design.
Cell, 186, 2023
8INI
DownloadVisualize
BU of 8ini by Molmil
vaccinia H2 protein without the transmembrane region
Descriptor: TETRAETHYLENE GLYCOL, vaccinia h2 protein
Authors:Liu, C.Y, Ko, T.P, Wang, H.C, Chang, W.
Deposit date:2023-03-10
Release date:2023-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and functional analyses of viral H2 protein of the vaccinia virus entry fusion complex.
J.Virol., 97, 2023
6N4Z
DownloadVisualize
BU of 6n4z by Molmil
Tetragonal thermolysin (with 50% xylose) plunge cooled in liquid nitrogen to 77 K
Descriptor: CALCIUM ION, Thermolysin, ZINC ION, ...
Authors:Juers, D.H, Harrison, K, Wu, B.
Deposit date:2018-11-20
Release date:2019-10-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A comparison of gas stream cooling and plunge cooling of macromolecular crystals.
J.Appl.Crystallogr., 52, 2019
3QC0
DownloadVisualize
BU of 3qc0 by Molmil
Crystal structure of a sugar isomerase (SMc04130) from SINORHIZOBIUM MELILOTI 1021 at 1.45 A resolution
Descriptor: TETRAETHYLENE GLYCOL, UNKNOWN LIGAND, ZINC ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2011-01-14
Release date:2011-04-06
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of a sugar isomerase (SMc04130) from SINORHIZOBIUM MELILOTI 1021 at 1.45 A resolution
To be published
6N4W
DownloadVisualize
BU of 6n4w by Molmil
Tetragonal thermolysin (with 50% xylose) cryocooled in a nitrogen gas stream to 100 K
Descriptor: CALCIUM ION, Thermolysin, ZINC ION, ...
Authors:Juers, D.H, Harrison, K, Wu, B.
Deposit date:2018-11-20
Release date:2019-10-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A comparison of gas stream cooling and plunge cooling of macromolecular crystals.
J.Appl.Crystallogr., 52, 2019
5EYY
DownloadVisualize
BU of 5eyy by Molmil
Tetragonal Form of Centrolobium tomentosum seed lectin (CTL) complexed with Man1-3Man-OMe.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Centrolobium tomentosum lectin, ...
Authors:Pinto-Junior, V.R, Osterne, V.J.S, Santiago, M.Q, Almeida, A.C, Lossio, C.F, Silva-Filho, J.C, Almeida, R.P.H, Teixeira, C.S, Delatorre, P, Rocha, B.A.M, Nascimento, K.S, Cavada, B.S.
Deposit date:2015-11-25
Release date:2016-03-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Structural analysis of Centrolobium tomentosum seed lectin with inflammatory activity.
Arch.Biochem.Biophys., 596, 2016
6BJX
DownloadVisualize
BU of 6bjx by Molmil
Group I self-splicing intron P4-P6 domain mutant U131A (with isopropanol soaking)
Descriptor: Group I self-splicing intron P4-P6 domain, MAGNESIUM ION
Authors:Shoffner, G.M.
Deposit date:2017-11-07
Release date:2018-07-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:In Crystallo Selection to Establish New RNA Crystal Contacts.
Structure, 26, 2018
6FZZ
DownloadVisualize
BU of 6fzz by Molmil
Crystal structure of BSE31 (BSPA14S_RS05060 gene product) from Lyme disease agent Borrelia (Borreliella) spielmanii
Descriptor: TETRAETHYLENE GLYCOL, Virulent strain associated lipoprotein
Authors:Brangulis, K, Akopjana, I, Kazaks, A, Tars, K.
Deposit date:2018-03-15
Release date:2019-03-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:BBE31 from the Lyme disease agent Borrelia burgdorferi, known to play an important role in successful colonization of the mammalian host, shows the ability to bind glutathione.
Biochim Biophys Acta Gen Subj, 1864, 2019
6D8M
DownloadVisualize
BU of 6d8m by Molmil
Group I self-splicing intron P4-P6 domain mutant A125U/G126U
Descriptor: Group I self-splicing intron, MAGNESIUM ION
Authors:Shoffner, G.M.
Deposit date:2018-04-26
Release date:2018-07-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:In Crystallo Selection to Establish New RNA Crystal Contacts.
Structure, 26, 2018
4R4G
DownloadVisualize
BU of 4r4g by Molmil
Crystal structure of a putative lipoprotein (ycdA) from Bacillus subtilis subsp. subtilis str. 168 at 2.62 A resolution
Descriptor: TETRAETHYLENE GLYCOL, putative lipoprotein YcdA
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-08-19
Release date:2014-09-17
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Crystal structure of a putative lipoprotein (ycdA) from Bacillus subtilis subsp. subtilis str. 168 at 2.62 A resolution
To be published
4FYC
DownloadVisualize
BU of 4fyc by Molmil
Structural and functional characterizations of a thioredoxin-fold protein from Helicobacter pylori
Descriptor: TETRAETHYLENE GLYCOL, Thiol:disulfide interchange protein (DsbC)
Authors:Yoon, J.Y, Kim, J, Lee, S.J, Im, H.N, Kim, H.S, Yoon, H, An, D.R, Kim, J.Y, Kim, S, Han, B.W, Suh, S.W.
Deposit date:2012-07-04
Release date:2013-05-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural and functional characterization of HP0377, a thioredoxin-fold protein from Helicobacter pylori
Acta Crystallogr.,Sect.D, 69, 2013
4JBU
DownloadVisualize
BU of 4jbu by Molmil
1.65A structure of the T3SS tip protein LcrV (G28-D322, C273S) from Yersinia pestis
Descriptor: TETRAETHYLENE GLYCOL, Virulence-associated V antigen
Authors:Lovell, S, Chaudhury, S, Battaile, K.P, Plano, G, De Guzman, R.N.
Deposit date:2013-02-20
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of the Yersinia pestis tip protein LcrV refined to 1.65A resolution
Acta Crystallogr.,Sect.F, 69, 2013
2Q7D
DownloadVisualize
BU of 2q7d by Molmil
Crystal Structure of Human Inositol 1,3,4-Trisphosphate 5/6-kinase (ITPK1) in complex with AMPPNP and Mn2+
Descriptor: Inositol-tetrakisphosphate 1-kinase, MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Chamberlain, P.P, Lesley, S.A, Spraggon, G.
Deposit date:2007-06-06
Release date:2007-07-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Integration of inositol phosphate signaling pathways via human ITPK1.
J.Biol.Chem., 282, 2007

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon