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2ZSH
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BU of 2zsh by Molmil
Structural basis of gibberellin(GA3)-induced DELLA recognition by the gibberellin receptor
Descriptor: DELLA protein GAI, GIBBERELLIN A3, Probable gibberellin receptor GID1L1
Authors:Murase, K, Hirano, Y, Sun, T.P, Hakoshima, T.
Deposit date:2008-09-10
Release date:2008-11-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Gibberellin-induced DELLA recognition by the gibberellin receptor GID1
Nature, 456, 2008
2ZSI
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BU of 2zsi by Molmil
Structural basis of gibberellin(GA4)-induced DELLA recognition by the gibberellin receptor
Descriptor: DELLA protein GAI, GIBBERELLIN A4, Probable gibberellin receptor GID1L1
Authors:Murase, K, Hirano, Y, Sun, T.P, Hakoshima, T.
Deposit date:2008-09-10
Release date:2008-11-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Gibberellin-induced DELLA recognition by the gibberellin receptor GID1
Nature, 456, 2008
2DQ5
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BU of 2dq5 by Molmil
solution structure of the Mid1 B Box2 Chc(D/C)C2H2 Zinc-Binding Domain: insights into an evolutionary conserved ring fold
Descriptor: Midline-1, ZINC ION
Authors:Massiah, M.A, Matts, J.A.B, Short, K.M, Simmons, B.N, Singireddy, S, Zou, J, Cox, T.C.
Deposit date:2006-05-20
Release date:2007-04-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of the MID1 B-box2 CHC(D/C)C(2)H(2) Zinc-binding Domain: Insights into an Evolutionarily Conserved RING Fold
J.Mol.Biol., 369, 2007
2FFW
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BU of 2ffw by Molmil
Solution structure of the RBCC/TRIM B-box1 domain of human MID1: B-box with a RING
Descriptor: Midline-1, ZINC ION
Authors:Massiah, M.A, Simmons, B.N, Short, K.M, Cox, T.C.
Deposit date:2005-12-20
Release date:2006-05-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of the RBCC/TRIM B-box1 Domain of Human MID1: B-box with a RING.
J.Mol.Biol., 358, 2006
2L9S
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BU of 2l9s by Molmil
Solution structure of Pf1 SID1-mSin3A PAH2 Complex
Descriptor: PHD finger protein 12, Paired amphipathic helix protein Sin3a
Authors:Senthil Kumar, G, Xie, T, Zhang, Y, Radhakrishnan, I.
Deposit date:2011-02-23
Release date:2011-05-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of the mSin3A PAH2-Pf1 SID1 Complex: A Mad1/Mxd1-Like Interaction Disrupted by MRG15 in the Rpd3S/Sin3S Complex.
J.Mol.Biol., 408, 2011
2JUN
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BU of 2jun by Molmil
Structure of the MID1 tandem B-boxes reveals an interaction reminiscent of intermolecular RING heterodimers
Descriptor: Midline-1, ZINC ION
Authors:Tao, H, Singireddy, S, Jakkidi, M, Simmons, B.N, Short, K.M, Cox, T.C, Massiah, M.A.
Deposit date:2007-08-31
Release date:2008-03-04
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of the MID1 Tandem B-Boxes Reveals an Interaction Reminiscent of Intermolecular Ring Heterodimers
Biochemistry, 47, 2008
7X89
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BU of 7x89 by Molmil
Tid1
Descriptor: DnaJ homolog subfamily A member 3, mitochondrial
Authors:Jang, J, Lee, S.H, Kang, D.H, Sim, D.W, Jo, K.S, Ryu, H, Kim, E.H, Ryu, K.S, Lee, J.H, Kim, J.H, Won, H.S.
Deposit date:2022-03-11
Release date:2023-03-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural studies on the J-domain and GF-motif of the mitochondrial Hsp40, Tid1
To Be Published
6MGN
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BU of 6mgn by Molmil
mouse Id1 (51-104) - human hE47 (348-399) complex
Descriptor: DNA-binding protein inhibitor ID-1, Transcription factor E2-alpha
Authors:Benezra, R, Pavletich, N.P, Gall, A.-L, Goldgur, Y.
Deposit date:2018-09-14
Release date:2019-09-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:A Small-Molecule Pan-Id Antagonist Inhibits Pathologic Ocular Neovascularization.
Cell Rep, 29, 2019
7SMD
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BU of 7smd by Molmil
p107 pocket domain complexed with EID1 peptide
Descriptor: EP300-interacting inhibitor of differentiation 1, Retinoblastoma-like protein 1, SULFATE ION
Authors:Putta, S, Fernandez, S.M, Tripathi, S.M, Muller, G.A, Rubin, S.M.
Deposit date:2021-10-25
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for tunable affinity and specificity of LxCxE-dependent protein interactions with the retinoblastoma protein family.
Structure, 30, 2022
4NUF
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BU of 4nuf by Molmil
Crystal Structure of SHP/EID1
Descriptor: EID1 peptide, Maltose ABC transporter periplasmic protein, Nuclear receptor subfamily 0 group B member 2 chimeric construct, ...
Authors:Zhi, X, Zhou, X.E, He, Y, Zechner, C, Suino-Powell, K.M, Kliewer, S.A, Melcher, K, Mangelsdorf, D.J, Xu, H.E.
Deposit date:2013-12-03
Release date:2014-01-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into gene repression by the orphan nuclear receptor SHP.
Proc.Natl.Acad.Sci.USA, 111, 2014
4E80
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BU of 4e80 by Molmil
Structural Basis for the Activity of a Cytoplasmic RNA Terminal U-transferase
Descriptor: Poly(A) RNA polymerase protein cid1, URIDINE 5'-TRIPHOSPHATE
Authors:Yates, L.A, Fleurdepine, S, Rissland, O.S, DeColibus, L, Harlos, K, Norbury, C.J, Gilbert, R.J.C.
Deposit date:2012-03-19
Release date:2012-07-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Structural basis for the activity of a cytoplasmic RNA terminal uridylyl transferase.
Nat.Struct.Mol.Biol., 19, 2012
4E8F
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BU of 4e8f by Molmil
Structural Basis for the Activity of a Cytoplasmic RNA Terminal U-transferase
Descriptor: ACETATE ION, GLYCEROL, Poly(A) RNA polymerase protein cid1
Authors:Yates, L.A, Fleurdepine, S, Rissland, O.S, DeColibus, L, Harlos, K, Norbury, C.J, Gilbert, R.J.C.
Deposit date:2012-03-20
Release date:2012-07-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the activity of a cytoplasmic RNA terminal uridylyl transferase.
Nat.Struct.Mol.Biol., 19, 2012
4E7X
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BU of 4e7x by Molmil
Structural Basis for the Activity of a Cytoplasmic RNA Terminal U-transferase
Descriptor: ACETATE ION, Poly(A) RNA polymerase protein cid1
Authors:Yates, L.A, Fleurdepine, S, Rissland, O.S, DeColibus, L, Harlos, K, Norbury, C.J, Gilbert, R.J.C.
Deposit date:2012-03-19
Release date:2012-07-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for the activity of a cytoplasmic RNA terminal uridylyl transferase.
Nat.Struct.Mol.Biol., 19, 2012
2P57
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BU of 2p57 by Molmil
GAP domain of ZNF289, an ID1-regulated zinc finger protein
Descriptor: GTPase-activating protein ZNF289, UNKNOWN ATOM OR ION, ZINC ION
Authors:Tong, Y, Dimov, S, Shen, L, Zhu, H, Tempel, W, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2007-03-14
Release date:2007-03-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:GAP domain of ZNF289, an ID1-regulated zinc finger protein
To be Published
3I34
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BU of 3i34 by Molmil
Proteinase K by LB Nanotemplate Method after high X-Ray dose on ID14-2 Beamline at ESRF
Descriptor: CALCIUM ION, MERCURY (II) ION, Proteinase K
Authors:Pechkova, E, Tripathi, S.K, Ravelli, R, McSweeney, S, Nicolini, C.
Deposit date:2009-06-30
Release date:2010-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1 Å)
Cite:Radiation damage study of Proteinase K at ID14-2 beamline at ESRF
To be Published
5E6H
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BU of 5e6h by Molmil
A Linked Jumonji Domain of the KDM5A Lysine Demethylase
Descriptor: 2-OXOGLUTARIC ACID, GLYCEROL, Lysine-specific demethylase 5A, ...
Authors:Horton, J.R, Cheng, X.
Deposit date:2015-10-09
Release date:2015-12-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.238 Å)
Cite:Characterization of a Linked Jumonji Domain of the KDM5/JARID1 Family of Histone H3 Lysine 4 Demethylases.
J.Biol.Chem., 291, 2016
7QRY
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BU of 7qry by Molmil
Crystal structure of B30.2 PRYSPRY domain of MID1
Descriptor: E3 ubiquitin-protein ligase Midline-1
Authors:Chaikuad, A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2022-01-12
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of B30.2 PRYSPRY domain of MID1
To Be Published
4XH3
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BU of 4xh3 by Molmil
Mechanistic insights into anchorage of the contractile ring from yeast to humans
Descriptor: Actin-binding protein anillin
Authors:Sun, L.F, Guan, R.F, Chen, Z.C.
Deposit date:2015-01-04
Release date:2015-07-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanistic insights into the anchorage of the contractile ring by anillin and mid1
Dev.Cell, 33, 2015
4XOI
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BU of 4xoi by Molmil
Structure of hsAnillin bound with RhoA(Q63L) at 2.1 Angstroms resolution
Descriptor: Actin-binding protein anillin, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Sun, L, Guan, R, Lee, I.-J, Liu, Y, Chen, M, Wang, J, Wu, J, Chen, Z.
Deposit date:2015-01-16
Release date:2015-07-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.092 Å)
Cite:Mechanistic insights into the anchorage of the contractile ring by anillin and mid1
Dev.Cell, 33, 2015
8K12
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BU of 8k12 by Molmil
SID1 transmembrane family member 2
Descriptor: SID1 transmembrane family member 2
Authors:Guo, H, Qi, C, Lu, Y, Yang, H, Zhu, Y, Sun, F, Ji, X.
Deposit date:2023-07-10
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of human SID-1 transmembrane family proteins and implications for their low-pH-dependent RNA transport activity.
Cell Res., 34, 2024
8K1D
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BU of 8k1d by Molmil
SID1 transmembrane family member 1
Descriptor: SID1 transmembrane family member 1
Authors:Guo, H, Qi, C, Lu, Y, Yang, H, Zhu, Y, Sun, F, Ji, X.
Deposit date:2023-07-10
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Cryo-EM structures of human SID-1 transmembrane family proteins and implications for their low-pH-dependent RNA transport activity.
Cell Res., 34, 2024
6THH
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BU of 6thh by Molmil
Crystal structure of type I-D CRISPR-Cas nuclease Cas10d in complex with the SIRV3 AcrID1 (gp02) anti-CRISPR protein
Descriptor: CRISPR-associated protein, CscA, PHOSPHATE ION, ...
Authors:Manav, M.C, Brodersen, D.E.
Deposit date:2019-11-20
Release date:2020-10-28
Last modified:2021-06-30
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:Structural basis for inhibition of an archaeal CRISPR-Cas type I-D large subunit by an anti-CRISPR protein.
Nat Commun, 11, 2020
6IWS
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BU of 6iws by Molmil
Solution structure of the J-domain of Tid1, a Mitochondrial Hsp40/DnaJ Protein
Descriptor: DnaJ homolog subfamily A member 3, mitochondrial
Authors:Sim, D.W, Jo, K.S, Won, H.S, Kim, J.H.
Deposit date:2018-12-06
Release date:2019-12-11
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the J-domain of Tid1, a Mitochondrial Hsp40/DnaJ Protein
To Be Published
5LWB
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BU of 5lwb by Molmil
Crystal structure of human JARID1B in complex with S40650a
Descriptor: 1,2-ETHANEDIOL, 5-[1-[2-(dimethylamino)ethyl]pyrazol-4-yl]-7-oxidanylidene-6-propan-2-yl-6~{H}-pyrazolo[1,5-a]pyrimidine-3-carbonitrile, DIMETHYL SULFOXIDE, ...
Authors:Srikannathasan, V, Le Bihan, Y.V, Szykowska, A, Johansson, C, Gileadi, C, Arrowsmith, C.H, Edwards, A.M, Bountra, C, von Delft, F, Oppermann, U, Huber, K.
Deposit date:2016-09-15
Release date:2016-10-26
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Crystal structure of human JARID1B in complex with S40650a
to be published
6EXP
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BU of 6exp by Molmil
Crystal structure of the SIRV3 AcrID1 (gp02) anti-CRISPR protein
Descriptor: SIRV3 AcrID1 (gp02) anti-CRISPR protein
Authors:He, F, Bhoobalan-Chitty, Y, Van, L.B, Kjeldsen, A.L, Dedola, M, Makarova, K.S, Koonin, E.V, Brodersen, D.E, Peng, X.
Deposit date:2017-11-08
Release date:2018-01-31
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Anti-CRISPR proteins encoded by archaeal lytic viruses inhibit subtype I-D immunity.
Nat Microbiol, 3, 2018

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PDB entries from 2024-10-16

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