PDB: 45853 resultsInfo pagesStatus searchChemie searchBIRD

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6Q55	Crystal structure of Cryptosporidium hominis CPSF3 in complex with Compound 61 Descriptor: 3-[7,7-bis(oxidanyl)-8-oxa-7-boranuidabicyclo[4.3.0]nona-1(6),2,4-trien-5-yl]propanoic acid, Cleavage and Polyadenylation Specificity Factor 3 (CPSF3), GLYCEROL, ... Authors: Palencia, A, Swale, C. Deposit date: 2018-12-07 Release date: 2019-11-20 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2 Å) Cite: Metal-captured inhibition of pre-mRNA processing activity by CPSF3 controls Cryptosporidium infection. Sci Transl Med, 11, 2019
6M29	Sirohydrochlorin nickelochelatase CfbA in complex with Co2+ and formate Descriptor: COBALT (II) ION, FORMIC ACID, Sirohydrochlorin cobaltochelatase Authors: Fujishiro, T. Deposit date: 2020-02-26 Release date: 2021-01-13 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.9 Å) Cite: The nickel-sirohydrochlorin formation mechanism of the ancestral class II chelatase CfbA in coenzyme F430 biosynthesis. Chem Sci, 12, 2021
6XLX	Crystal structure of cancer-associated G301D mutant of U2AF65 bound to AdML splice site Descriptor: DNA/RNA (5'-R(P*UP*UP*(UD)P*UP*U)-D(P*(BRU))-R(P*CP*C)-3'), Splicing factor U2AF 65 kDa subunit Authors: Maji, D, Jenkins, J.L, Kielkopf, C.L. Deposit date: 2020-06-29 Release date: 2020-10-07 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Representative cancer-associated U2AF2 mutations alter RNA interactions and splicing. J.Biol.Chem., 295, 2020
7RQQ	Structure of chimeric antibody F10heavy_L9light with PfCSP peptide NANPNVDP Descriptor: 1,2-ETHANEDIOL, F10 Heavy Chain, L9 Kappa Chain, ... Authors: Hurlburt, N.K, Pancera, M. Deposit date: 2021-08-06 Release date: 2022-03-02 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (1.89 Å) Cite: The light chain of the L9 antibody is critical for binding circumsporozoite protein minor repeats and preventing malaria. Cell Rep, 38, 2022
8S4A	CdaA-B04 complex Descriptor: 2-[cyanomethyl(methyl)amino]-N-(6-methylpyridin-2-yl)ethanamide, CHLORIDE ION, Diadenylate cyclase Authors: Neumann, P, Ficner, R. Deposit date: 2024-02-21 Release date: 2024-06-19 Last modified: 2024-07-03 Method: X-RAY DIFFRACTION (2.23 Å) Cite: CdaA-B04 complex To Be Published
8S45	CdaA-E05 complex Descriptor: (1~{R},2~{S},3~{S},4~{R},5~{S})-2-azanyl-4-phenylsulfanyl-6,8-dioxabicyclo[3.2.1]octan-3-ol, Diadenylate cyclase Authors: Neumann, P, Ficner, R. Deposit date: 2024-02-21 Release date: 2024-06-19 Method: X-RAY DIFFRACTION (1.69 Å) Cite: CdaA-E05 complex To Be Published
7SHG	Polysaccharide ribofuranosyl transferase from Thermobacillus composti Descriptor: CHLORIDE ION, MAGNESIUM ION, Ribofuranosyl transferase Authors: Kimber, M.S, Kelly, S.D. Deposit date: 2021-10-08 Release date: 2022-03-02 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.5 Å) Cite: The biosynthetic origin of ribofuranose in bacterial polysaccharides. Nat.Chem.Biol., 18, 2022
6YYM	Structure of S. pombe Mei2 RRM3 domain bound to RNA Descriptor: Meiosis protein mei2, RNA (5'-R(*GP*CP*UP*UP*UP*UP*UP*GP*UP*UP*CP*G)-3') Authors: Hazra, D, Graille, M. Deposit date: 2020-05-05 Release date: 2020-12-23 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.63 Å) Cite: A scaffold lncRNA shapes the mitosis to meiosis switch. Nat Commun, 12, 2021
6NTV	SFTSV L endonuclease domain Descriptor: RNA polymerase Authors: Wang, W, Amarasinghe, G.K. Deposit date: 2019-01-30 Release date: 2020-01-08 Last modified: 2024-11-06 Method: X-RAY DIFFRACTION (2.4 Å) Cite: The Cap-Snatching SFTSV Endonuclease Domain Is an Antiviral Target. Cell Rep, 30, 2020
8S48	CdaA-C11 complex Descriptor: 2-(1H-indol-3-yl)-N-[(1-methyl-1H-pyrrol-2-yl)methyl]ethanamine, Diadenylate cyclase Authors: Neumann, P, Ficner, R. Deposit date: 2024-02-21 Release date: 2024-06-19 Method: X-RAY DIFFRACTION (1.65 Å) Cite: CdaA-C11 complex To Be Published
8S4B	CdaA-C08 complex Descriptor: (4-methoxycarbonylphenyl)methylazanium, Diadenylate cyclase Authors: Neumann, P, Ficner, R. Deposit date: 2024-02-21 Release date: 2024-06-19 Method: X-RAY DIFFRACTION (2.15 Å) Cite: CdaA-C08 complex To Be Published
6YTD	CLK1 V324A mutant bound with benzothiazole Tg003 (Cpd 2) Descriptor: (1~{Z})-1-(3-ethyl-5-methoxy-1,3-benzothiazol-2-ylidene)propan-2-one, Dual specificity protein kinase CLK1 Authors: Schroeder, M, Chaikuad, A, Knapp, S, Structural Genomics Consortium (SGC) Deposit date: 2020-04-24 Release date: 2020-07-15 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2 Å) Cite: DFG-1 Residue Controls Inhibitor Binding Mode and Affinity, Providing a Basis for Rational Design of Kinase Inhibitor Selectivity. J.Med.Chem., 63, 2020
7SCP	The crystal structure of ScoE in complex with intermediate Descriptor: (3R)-3-(oxaloamino)butanoic acid, 1,2-ETHANEDIOL, FE (II) ION, ... Authors: Cha, L, Chen, J, Zhou, J, Chang, W. Deposit date: 2021-09-28 Release date: 2022-03-23 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Deciphering the Reaction Pathway of Mononuclear Iron Enzyme-Catalyzed N-C Triple Bond Formation in Isocyanide Lipopeptide and Polyketide Biosynthesis Acs Catalysis, 12, 2022
8RUN	Structure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+, and ARN25850 Descriptor: 2-[2,6-bis(bromanyl)-3,4,5-tris(oxidanyl)phenyl]carbonyl-~{N}-(2-pyrrolidin-1-ylethyl)-1-benzofuran-5-carboxamide, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Domains 1-5, ... Authors: Silvestri, I, Marcia, M. Deposit date: 2024-01-31 Release date: 2024-06-19 Last modified: 2024-07-03 Method: X-RAY DIFFRACTION (3.73 Å) Cite: Targeting the conserved active site of splicing machines with specific and selective small molecule modulators. Nat Commun, 15, 2024
8S4C	CdaA-H04 complex Descriptor: DAMINOZIDE, Diadenylate cyclase Authors: Neumann, P, Ficner, R. Deposit date: 2024-02-21 Release date: 2024-06-19 Method: X-RAY DIFFRACTION (1.8 Å) Cite: CdaA-H04 complex To Be Published
6Z1D	Crystal structure of the AAA domain of Rubisco Activase from Nostoc sp. (strain PCC 7120), Gadolinium complex Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, GADOLINIUM ATOM, ... Authors: Popilka, L, Bracher, A. Deposit date: 2020-05-13 Release date: 2020-09-23 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (2.705 Å) Cite: Dual Functions of a Rubisco Activase in Metabolic Repair and Recruitment to Carboxysomes. Cell, 183, 2020
8R1O	Structure of C. thermophilum RNA exosome core Descriptor: Exoribonuclease phosphorolytic domain-containing protein, Exoribonuclease-like protein, Exosome complex component MTR3, ... Authors: Lazzaretti, D, Liebau, J, Pilsl, M, Sprangers, R. Deposit date: 2023-11-02 Release date: 2024-07-17 Method: ELECTRON MICROSCOPY (3.19 Å) Cite: Beyond static structures: quantitative dynamics in the eukaryotic RNA exosome complex Biorxiv, 2024
6NYW	Structure of spastin AAA domain N527C mutant in complex with 8-fluoroquinazoline-based inhibitor Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, N-(5-tert-butyl-1H-pyrazol-3-yl)-8-fluoro-2-[(2R)-2-methylpiperazin-1-yl]quinazolin-4-amine, ... Authors: Pisa, R, Cupido, T, Kapoor, T.M. Deposit date: 2019-02-12 Release date: 2019-03-27 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.189 Å) Cite: Designing Allele-Specific Inhibitors of Spastin, a Microtubule-Severing AAA Protein. J. Am. Chem. Soc., 141, 2019
6Z53	Crystal structure of CLK3 in complex with macrocycle ODS2003128 Descriptor: 1,2-ETHANEDIOL, 6-(2-methoxyethoxy)-11,15-dimethyl-8-oxa-2,11,15,19,21,23-hexazatetracyclo[15.6.1.13,7.020,24]pentacosa-1(23),3(25),4,6,17,20(24),21-heptaen-10-one, Dual specificity protein kinase CLK3, ... Authors: Chaikuad, A, Benderitter, P, Hoflack, J, Denis, A, Knapp, S, Structural Genomics Consortium (SGC) Deposit date: 2020-05-26 Release date: 2020-06-03 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Crystal structure of CLK3 in complex with macrocycle ODS2003128 To Be Published
6NE7	Structure of G810A mutant of RET protein tyrosine kinase domain. Descriptor: ADENOSINE MONOPHOSPHATE, FORMIC ACID, Proto-oncogene tyrosine-protein kinase receptor Ret Authors: Terzyan, S.S, Shen, T, Wu, J, Mooers, B.H.M. Deposit date: 2018-12-17 Release date: 2019-06-05 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Structural basis of resistance of mutant RET protein-tyrosine kinase to its inhibitors nintedanib and vandetanib. J.Biol.Chem., 294, 2019
6Z9K	CAP domain of Enterococcal PrgA Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MAGNESIUM ION, PrgA Authors: Berntsson, R.P.A, Schmitt, A. Deposit date: 2020-06-04 Release date: 2020-09-16 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Enterococcal PrgA Extends Far Outside the Cell and Provides Surface Exclusion to Protect against Unwanted Conjugation. J.Mol.Biol., 432, 2020
6YU1	CLK3 bound with beta-carboline KH-CARB13 (Cpd 3) Descriptor: (4~{S})-7,8-bis(chloranyl)-9-methyl-1-oxidanylidene-spiro[2,4-dihydropyrido[3,4-b]indole-3,4'-piperidine]-4-carbonitrile, 1,2-ETHANEDIOL, Dual specificity protein kinase CLK3, ... Authors: Schroeder, M, Chaikuad, A, Knapp, S, Structural Genomics Consortium (SGC) Deposit date: 2020-04-25 Release date: 2020-07-15 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.9 Å) Cite: DFG-1 Residue Controls Inhibitor Binding Mode and Affinity, Providing a Basis for Rational Design of Kinase Inhibitor Selectivity. J.Med.Chem., 63, 2020
6YW0	Lysine-N,N-Dimethylated HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with BB-287 Descriptor: 4-(isoquinolin-3-ylamino)-4-oxobutanoic acid, BICARBONATE ION, Egl nine homolog 1, ... Authors: Chowdhury, R, Schofield, C.J. Deposit date: 2020-04-29 Release date: 2020-12-30 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Use of cyclic peptides to induce crystallization: case study with prolyl hydroxylase domain 2. Sci Rep, 10, 2020
6ZA0	Structure of the transcriptional repressor Atu1419 (VanR) in complex with a fortuitous citrate from agrobacterium fabrum (P21212 space group) Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ... Authors: Morera, S, Vigouroux, A, Legrand, P. Deposit date: 2020-06-04 Release date: 2020-12-02 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum. Nucleic Acids Res., 49, 2021
6ZA3	Structure of the transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum in complex a palindromic DNA (C2221 space group) Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ... Authors: Morera, S, Vigouroux, A, Legrand, P. Deposit date: 2020-06-04 Release date: 2020-12-02 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum. Nucleic Acids Res., 49, 2021

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