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2V0Y
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BU of 2v0y by Molmil
Crystal structure of apo C298S tryptophanase from E.coli
Descriptor: CHLORIDE ION, MAGNESIUM ION, TRYPTOPHANASE
Authors:Kogan, A, Gdalevsky, G.Y, Cohen-Luria, R, Goldgur, Y, Parola, A.H, Almog, O.
Deposit date:2007-05-21
Release date:2008-06-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational Changes and Loose Packing Promote E. Coli Tryptophanase Cold Lability.
Bmc Struct.Biol., 9, 2009
3F6J
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BU of 3f6j by Molmil
F17a-G lectin domain with bound GlcNAc(beta1-3)Gal
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-methyl beta-D-galactopyranoside, F17a-G
Authors:Buts, L, de Boer, A, Olsson, J.D.M, Jonckheere, W, De Kerpel, M, De Genst, E, Guerardel, Y, Willaert, R, Wyns, L, Wuhrer, M, Oscarson, S, De Greve, H, Bouckaert, J.
Deposit date:2008-11-06
Release date:2009-11-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Sampling of Glycan Interaction Profiles Reveals Mucosal Receptors for Fimbrial Adhesins of Enterotoxigenic Escherichia coli
Biology, 2, 2013
1DJ2
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BU of 1dj2 by Molmil
STRUCTURES OF ADENYLOSUCCINATE SYNTHETASE FROM TRITICUM AESTIVUM AND ARABIDOPSIS THALIANA
Descriptor: ADENYLOSUCCINATE SYNTHETASE, GUANOSINE-5'-DIPHOSPHATE
Authors:Prade, L, Cowan-Jacob, S.W, Chemla, P, Potter, S, Ward, E, Fonne-Pfister, R.
Deposit date:1999-12-01
Release date:2000-03-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of adenylosuccinate synthetase from Triticum aestivum and Arabidopsis thaliana.
J.Mol.Biol., 296, 2000
7KZG
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BU of 7kzg by Molmil
Human MBD4 glycosylase domain bound to DNA containing oxacarbenium-ion analog 1-aza-2'-deoxyribose
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Pidugu, L.S, Pozharski, E, Drohat, A.C.
Deposit date:2020-12-10
Release date:2021-11-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural Insights into the Mechanism of Base Excision by MBD4.
J.Mol.Biol., 433, 2021
1KR7
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BU of 1kr7 by Molmil
Crystal structure of the nerve tissue mini-hemoglobin from the nemertean worm Cerebratulus lacteus
Descriptor: ACETATE ION, Neural globin, OXYGEN MOLECULE, ...
Authors:Pesce, A, Nardini, M, Dewilde, S, Geuens, E, Yamauchi, k, Ascenzi, P, Riggs, A.F, Moens, L, Bolognesi, M.
Deposit date:2002-01-09
Release date:2002-05-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The 109 residue nerve tissue minihemoglobin from Cerebratulus lacteus highlights striking structural plasticity of the alpha-helical globin fold
Structure, 10, 2002
1UZV
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BU of 1uzv by Molmil
High affinity fucose binding of Pseudomonas aeruginosa lectin II: 1.0 A crystal structure of the complex
Descriptor: CALCIUM ION, PSEUDOMONAS AERUGINOSA LECTIN II, SULFATE ION, ...
Authors:Mitchell, E, Sabin, C.D, Snajdrova, L, Budova, M, Perret, S, Gautier, C, Gilboa-Garber, N, Koca, J, Wimmerova, M, Imberty, A.
Deposit date:2004-03-17
Release date:2004-12-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1 Å)
Cite:High Affinity Fucose Binding of Pseudomonas Aeruginosa Lectin Pa-Iil: 1.0 A Resolution Crystal Structure of the Complex Combined with Thermodynamics and Computational Chemistry Approaches.
Proteins, 58, 2005
7KZ1
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BU of 7kz1 by Molmil
Human MBD4 glycosylase domain bound to DNA containing an abasic site
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*CP*AP*GP*CP*GP*(ORP)P*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*GP*CP*GP*CP*TP*GP*G)-3'), ...
Authors:Pidugu, L.S, Bright, H, Pozharski, E, Drohat, A.C.
Deposit date:2020-12-09
Release date:2021-11-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structural Insights into the Mechanism of Base Excision by MBD4.
J.Mol.Biol., 433, 2021
3C44
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BU of 3c44 by Molmil
Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to paromomycin
Descriptor: CHLORIDE ION, HIV-1 subtype F genomic RNA, PAROMOMYCIN, ...
Authors:Freisz, S, Ennifar, E, Dumas, P.
Deposit date:2008-01-29
Release date:2008-05-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Binding of aminoglycoside antibiotics to the duplex form of the HIV-1 genomic RNA dimerization initiation site.
Angew.Chem.Int.Ed.Engl., 47, 2008
1DGD
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BU of 1dgd by Molmil
AN ALKALI METAL ION SIZE-DEPENDENT SWITCH IN THE ACTIVE SITE STRUCTURE OF DIALKYLGLYCINE DECARBOXYLASE
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DIALKYLGLYCINE DECARBOXYLASE, LITHIUM ION, ...
Authors:Hohenester, E, Jansonius, J.N.
Deposit date:1994-06-29
Release date:1994-09-30
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:An alkali metal ion size-dependent switch in the active site structure of dialkylglycine decarboxylase.
Biochemistry, 33, 1994
2PGQ
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BU of 2pgq by Molmil
Human thrombin mutant C191A-C220A in complex with the inhibitor PPACK
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, Thrombin heavy chain, ...
Authors:Bush-Pelc, L.A, Marino, F, Chen, Z, Pineda, A.O, Mathews, F.S, Di Cera, E.
Deposit date:2007-04-10
Release date:2007-07-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Important role of the cys-191 cys-220 disulfide bond in thrombin function and allostery
J.Biol.Chem., 282, 2007
1PHO
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BU of 1pho by Molmil
CRYSTAL STRUCTURES EXPLAIN FUNCTIONAL PROPERTIES OF TWO E. COLI PORINS
Descriptor: PHOSPHOPORIN
Authors:Schirmer, T, Cowan, S.W, Jansonius, J.N.
Deposit date:1993-01-15
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures explain functional properties of two E. coli porins.
Nature, 358, 1992
7JYM
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BU of 7jym by Molmil
CRYSTAL STRUCTURE OF RAR-RELATED ORPHAN RECEPTOR C (NHIS-RORGT(244-487)-L6-SRC1(678-692)) IN COMPLEX WITH A TRICYCLIC SULFONE INVERSE AGONIST
Descriptor: (3R,5S)-3-fluoro-5-[(3aR,9bR)-9b-[(4-fluorophenyl)sulfonyl]-7-(1,1,1,2,3,3,3-heptafluoropropan-2-yl)-1,2,3a,4,5,9b-hexahydro-3H-benzo[e]indole-3-carbonyl]-1-(2-hydroxy-2-methylpropyl)pyrrolidin-2-one, Nuclear receptor ROR-gamma, Nuclear receptor coactivator 1
Authors:Sack, J.
Deposit date:2020-08-31
Release date:2020-11-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.051 Å)
Cite:Novel Tricyclic Pyroglutamide Derivatives as Potent ROR gamma t Inverse Agonists Identified using a Virtual Screening Approach.
Acs Med.Chem.Lett., 11, 2020
2W5W
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BU of 2w5w by Molmil
Structure of TAB5 alkaline phosphatase mutant His 135 Asp with Zn bound in the M3 site.
Descriptor: ALKALINE PHOSPHATASE, ZINC ION
Authors:Koutsioulis, D, Lyskowski, A, Maki, S, Guthrie, E, Feller, G, Bouriotis, V, Heikinheimo, P.
Deposit date:2008-12-15
Release date:2009-11-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Coordination Sphere of the Third Metal Site is Essential to the Activity and Metal Selectivity of Alkaline Phosphatases.
Protein Sci., 19, 2010
7DFN
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BU of 7dfn by Molmil
Crystal structure of glycoside hydrolase family 11 beta-xylanase from Streptomyces olivaceoviridis E-86 in complex with alpha-L-arabinofuranosyl xylotetraose
Descriptor: CHLORIDE ION, Endo-1,4-beta-xylanase, SODIUM ION, ...
Authors:Fujimoto, Z, Kishine, N, Kaneko, S.
Deposit date:2020-11-09
Release date:2020-12-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-based substrate specificity analysis of GH11 xylanase from Streptomyces olivaceoviridis E-86.
Appl.Microbiol.Biotechnol., 105, 2021
4IXM
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BU of 4ixm by Molmil
Crystal structure of Zn(II)-bound YjiA GTPase from E. coli
Descriptor: SULFATE ION, Uncharacterized GTP-binding protein YjiA, ZINC ION
Authors:Jost, M, Ryan, K.S, Turo, K.E, Drennan, C.L.
Deposit date:2013-01-26
Release date:2013-02-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Metal binding properties of Escherichia coli YjiA, a member of the metal homeostasis-associated COG0523 family of GTPases.
Biochemistry, 52, 2013
3BNQ
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BU of 3bnq by Molmil
Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the Presence of SrCl2 (A1555G mutant, Br-derivative)
Descriptor: A site of human mitochondrial ribosome, A chain, B chain, ...
Authors:Kondo, J, Westhof, E.
Deposit date:2007-12-14
Release date:2008-06-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:The bacterial and mitochondrial ribosomal A-site molecular switches possess different conformational substates
Nucleic Acids Res., 36, 2008
2AX9
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BU of 2ax9 by Molmil
Crystal Structure Of The Androgen Receptor Ligand Binding Domain In Complex With R-3
Descriptor: (R)-3-BROMO-2-HYDROXY-2-METHYL-N-[4-NITRO-3-(TRIFLUOROMETHYL)PHENYL]PROPANAMIDE, Androgen receptor
Authors:Bohl, C.E, Miller, D.D, Chen, J, Bell, C.E, Dalton, J.T.
Deposit date:2005-09-03
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Basis for Accommodation of Nonsteroidal Ligands in the Androgen Receptor
J.Biol.Chem., 280, 2005
6G24
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BU of 6g24 by Molmil
X-ray structure of NSD3-PWWP1 in complex with compound 3
Descriptor: 2-[(~{E})-2-thiophen-2-ylethenyl]benzoic acid, Histone-lysine N-methyltransferase NSD3
Authors:Boettcher, J, Muellauer, B.J, Weiss-Puxbaum, A, Zoephel, A.
Deposit date:2018-03-22
Release date:2019-06-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Fragment-based discovery of a chemical probe for the PWWP1 domain of NSD3.
Nat.Chem.Biol., 15, 2019
1LMP
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BU of 1lmp by Molmil
THE CRYSTAL STRUCTURES OF THREE COMPLEXES BETWEEN CHITOOLIGOSACCHARIDES AND LYSOZYME FROM THE RAINBOW TROUT
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, LYSOZYME
Authors:Karlsen, S, Hough, E.
Deposit date:1994-10-25
Release date:1996-01-01
Last modified:2023-07-26
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of three complexes between chito-oligosaccharides and lysozyme from the rainbow trout. How distorted is the NAG sugar in site D?
Acta Crystallogr.,Sect.D, 51, 1995
3NXY
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BU of 3nxy by Molmil
Preferential Selection of Isomer Binding from Chiral Mixtures: Alernate Binding Modes Observed fro the E- and Z-isomers of a Series of 5-Substituted 2,4-Diaminofuro[2,3-d]pyrimidines as Ternary Complexes with NADPH and Human Dihydrofolate Reductase
Descriptor: 5-[(1E,3R)-2-(2-methoxyphenyl)-3-methylpent-1-en-1-yl]furo[2,3-d]pyrimidine-2,4-diamine, Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Cody, V.
Deposit date:2010-07-14
Release date:2010-12-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Preferential selection of isomer binding from chiral mixtures: alternate binding modes observed for the E and Z isomers of a series of 5-substituted 2,4-diaminofuro[2,3-d]pyrimidines as ternary complexes with NADPH and human dihydrofolate reductase.
Acta Crystallogr.,Sect.D, 66, 2010
1LCW
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BU of 1lcw by Molmil
streptavidin-homobiotin complex
Descriptor: HOMOBIOTIN, Streptavidin
Authors:Livnah, O, Pazy, Y, Bayer, E.A, Wilchek, M.
Deposit date:2002-04-07
Release date:2002-11-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Ligand exchange between proteins: exchange of biotin and biotin derivatives between avidin and streptavidin
J.Biol.Chem., 277, 2002
2AX8
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BU of 2ax8 by Molmil
Crystal Structure Of The Androgen Receptor Ligand Binding Domain W741L Mutant In Complex With S-1
Descriptor: Androgen receptor, S-3-(4-FLUOROPHENOXY)-2-HYDROXY-2-METHYL-N-[4-NITRO-3-(TRIFLUOROMETHYL)PHENYL]PROPANAMIDE
Authors:Bohl, C.E, Miller, D.D, Chen, J, Bell, C.E, Dalton, J.T.
Deposit date:2005-09-03
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Basis for Accommodation of Nonsteroidal Ligands in the Androgen Receptor
J.Biol.Chem., 280, 2005
4KG2
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BU of 4kg2 by Molmil
Crystal Structure of AmpC beta-lactamase from E. coli in Complex with Cefotaxime
Descriptor: Beta-lactamase, CEFOTAXIME, C3' cleaved, ...
Authors:Docter, B.E, Baggett, V.L, Powers, R.A, Wallar, B.J.
Deposit date:2013-04-28
Release date:2014-10-29
Last modified:2018-09-19
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Complexed structures of AmpC beta-lactamase
To be Published
5FEE
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BU of 5fee by Molmil
EGFR kinase domain T790M mutant in complex with a covalent aminobenzimidazole inhibitor.
Descriptor: Epidermal growth factor receptor, ~{N}-[7-methyl-1-[(3~{R})-1-propanoylazepan-3-yl]benzimidazol-2-yl]-3-(trifluoromethyl)benzamide
Authors:DiDonato, M, Spraggon, G.
Deposit date:2015-12-16
Release date:2016-07-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Discovery of (R,E)-N-(7-Chloro-1-(1-[4-(dimethylamino)but-2-enoyl]azepan-3-yl)-1H-benzo[d]imidazol-2-yl)-2-methylisonicotinamide (EGF816), a Novel, Potent, and WT Sparing Covalent Inhibitor of Oncogenic (L858R, ex19del) and Resistant (T790M) EGFR Mutants for the Treatment of EGFR Mutant Non-Small-Cell Lung Cancers.
J.Med.Chem., 59, 2016
3UQS
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BU of 3uqs by Molmil
Crystal structures of murine norovirus RNA-dependent RNA polymerase
Descriptor: RNA-dependent RNA polymerase, SULFATE ION
Authors:Milani, M, Mastrangelo, E, Bolognesi, M.
Deposit date:2011-11-21
Release date:2012-05-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-Based Inhibition of Norovirus RNA-Dependent RNA Polymerases.
J.Mol.Biol., 419, 2012

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