Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

9FS9
DownloadVisualize
BU of 9fs9 by Molmil
Self assembly domain of the surface layer protein of Viridibacillus arvi (aa 765-844)
Descriptor: BROMIDE ION, S-layer
Authors:Grininger, C, Sagmeister, T, Pavkov-Keller, T.
Deposit date:2024-06-20
Release date:2024-08-28
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:SymProFold: Structural prediction of symmetrical biological assemblies.
Nat Commun, 15, 2024
9FS7
DownloadVisualize
BU of 9fs7 by Molmil
Coxsackievirus A16 3C protease in C2 2 21 spacegroup
Descriptor: Genome polyprotein
Authors:Fairhead, M, Lithgo, R, MacLean, M, Bowesman-Jones, H, Aschenbrenner, J.C, Balcomb, B.H, Capkin, E, Chandran, A.V, Godoy, A.S, Marples, P.G, Fearon, D, von Delft, F, Koekemoer, L.
Deposit date:2024-06-20
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Coxsackievirus A16 3C protease in C2 2 21 spacegroup
To Be Published
9FR2
DownloadVisualize
BU of 9fr2 by Molmil
CDK2 in complex with WEIZ-WX-04-001
Descriptor: 4-[[6-(cyclohexylmethoxy)-7~{H}-purin-2-yl]amino]benzenesulfonyl fluoride, Cyclin-dependent kinase 2
Authors:Wang, G.Q, Liu, Y.H, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2024-06-18
Release date:2024-09-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:CDK2 in complex with WEIZ-WX-04-001
To Be Published
9FQJ
DownloadVisualize
BU of 9fqj by Molmil
E3 ligase Cbl-b in complex with a carbamate scaffold inhibitor (compound 12)
Descriptor: 2-cyclopropyl-6-methyl-~{N}-[3-[(6~{S})-6-methyl-2-oxidanylidene-1,3-oxazinan-6-yl]phenyl]pyrimidine-4-carboxamide, E3 ubiquitin-protein ligase CBL-B, SODIUM ION, ...
Authors:Schimpl, M.
Deposit date:2024-06-17
Release date:2024-07-31
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.563 Å)
Cite:Accelerated Discovery of Carbamate Cbl-b Inhibitors Using Generative AI Models and Structure-Based Drug Design.
J.Med.Chem., 67, 2024
9FQI
DownloadVisualize
BU of 9fqi by Molmil
E3 ligase Cbl-b in complex with a lactam scaffold inhibitor (compound 7)
Descriptor: 8-[3-[(4~{R})-4-methyl-2-oxidanylidene-piperidin-4-yl]phenyl]-3-[[(3~{S})-3-methylpiperidin-1-yl]methyl]-5-(trifluoromethyl)-1$l^{4},7,8-triazabicyclo[4.3.0]nona-1(6),2,4-trien-9-one, E3 ubiquitin-protein ligase CBL-B, SODIUM ION, ...
Authors:Schimpl, M.
Deposit date:2024-06-17
Release date:2024-07-31
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.954 Å)
Cite:Accelerated Discovery of Carbamate Cbl-b Inhibitors Using Generative AI Models and Structure-Based Drug Design.
J.Med.Chem., 67, 2024
9FQH
DownloadVisualize
BU of 9fqh by Molmil
E3 ligase Cbl-b in complex with a triazolone core inhibitor (compound 1)
Descriptor: 8-[3-[3-methyl-1-(4-methyl-1,2,4-triazol-3-yl)cyclobutyl]phenyl]-3-[[(3~{S})-3-methylpiperidin-1-yl]methyl]-5-(trifluoromethyl)-1$l^{4},7,8-triazabicyclo[4.3.0]nona-1(6),2,4-trien-9-one, E3 ubiquitin-protein ligase CBL-B, SODIUM ION, ...
Authors:Schimpl, M.
Deposit date:2024-06-17
Release date:2024-07-31
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.786 Å)
Cite:Accelerated Discovery of Carbamate Cbl-b Inhibitors Using Generative AI Models and Structure-Based Drug Design.
J.Med.Chem., 67, 2024
9FQA
DownloadVisualize
BU of 9fqa by Molmil
Crystal structure of SARS-CoV-2 main protease (MPro) in complex with the covalently bound inhibitor PSB-21101 (compound 30b in publication)
Descriptor: (5-chloranylpyridin-3-yl) 2-fluoranyl-4-phenylmethoxy-benzoate, BROMIDE ION, MAGNESIUM ION, ...
Authors:Strater, N, Claff, T, Sylvester, K, Oneto, A, Guetschow, M, Mueller, C.E.
Deposit date:2024-06-14
Release date:2024-08-28
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Nonpeptidic Irreversible Inhibitors of SARS-CoV-2 Main Protease with Potent Antiviral Activity.
J.Med.Chem., 67, 2024
9FQ9
DownloadVisualize
BU of 9fq9 by Molmil
Crystal structure of SARS-CoV-2 main protease (MPro) in complex with the covalently bound inhibitor PSB-21110 (compound 29b in publication)
Descriptor: (5-chloranylpyridin-3-yl) 4-ethoxy-2-fluoranyl-benzoate, BROMIDE ION, Non-structural protein 11
Authors:Strater, N, Claff, T, Sylvester, K, Oneto, A, Guetschow, M, Mueller, C.E.
Deposit date:2024-06-19
Release date:2024-08-28
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Nonpeptidic Irreversible Inhibitors of SARS-CoV-2 Main Protease with Potent Antiviral Activity.
J.Med.Chem., 67, 2024
9FQ2
DownloadVisualize
BU of 9fq2 by Molmil
Poliovirus 3C protease in H32 spacegroup
Descriptor: Protease 3C
Authors:Fairhead, M, Lithgo, R.M, MacLean, E.M, Bowesman-Jones, H, Aschenbrenner, J.C, Balcomb, B.H, Capkin, E, Chandran, A.V, Godoy, A.S, Marples, P.G, Fearon, D, von Delft, F, Koekemoer, L.
Deposit date:2024-06-14
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Poliovirus 3C protease in H32 spacegroup
To Be Published
9FQ0
DownloadVisualize
BU of 9fq0 by Molmil
Human NatA-NAC-MAP1 80S ribosome complex
Descriptor: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L19, ...
Authors:Klein, M.A, Wild, K, Sinning, I.
Deposit date:2024-06-14
Release date:2024-07-03
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (4.67 Å)
Cite:Multi-protein assemblies orchestrate co-translational enzymatic processing on the human ribosome.
Nat Commun, 15, 2024
9FPZ
DownloadVisualize
BU of 9fpz by Molmil
Human NatA-MAP2 80S ribosome complex
Descriptor: 28S rRNA, 5.8S rRNA (58-MER), 60S ribosomal protein L19, ...
Authors:Klein, M.A, Wild, K, Sinning, I.
Deposit date:2024-06-14
Release date:2024-07-03
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:Multi-protein assemblies orchestrate co-translational enzymatic processing on the human ribosome.
Nat Commun, 15, 2024
9FP6
DownloadVisualize
BU of 9fp6 by Molmil
Structure of the NbNRC2 hexameric resistosome
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, NRC2a
Authors:Webster, M.W, Madhuprakash, J, Kamoun, S.
Deposit date:2024-06-13
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structure of the NbNRC2 hexameric resistosome
To Be Published
9FP5
DownloadVisualize
BU of 9fp5 by Molmil
Coxsackievirus A9 bound with CL213.
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Plavec, Z, Butcher, S.J, Mitchell, C, Buckner, C.
Deposit date:2024-06-13
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:SAR Analysis of Novel Coxsackie virus A9 Capsid Binders.
J.Med.Chem., 2024
9FP2
DownloadVisualize
BU of 9fp2 by Molmil
Cryo-EM structure of the BcsEFRQ regulatory subcomplex for E. coli cellulose secretion in non-saturating c-di-GMP (local)
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), ADENOSINE-5'-TRIPHOSPHATE, Cell division protein, ...
Authors:Anso, I, Krasteva, P.V.
Deposit date:2024-06-12
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Structural basis for synthase activation and cellulose modification in the E. coli Type II Bcs secretion system.
Nat Commun, 2024
9FP0
DownloadVisualize
BU of 9fp0 by Molmil
Cryo-EM structure of the 'crown'less Bcs macrocomplex for E. coli cellulose secretion in non-saturating c-di-GMP (local)
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), ADENOSINE-5'-TRIPHOSPHATE, Cell division protein, ...
Authors:Anso, I, Krasteva, P.V.
Deposit date:2024-06-12
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Structural basis for synthase activation and cellulose modification in the E. coli Type II Bcs secretion system.
Nat Commun, 2024
9FOY
DownloadVisualize
BU of 9foy by Molmil
Ternary complex of a Mycobacterium tuberculosis DNA gyrase core fusion with DNA and the inhibitor AMK32b
Descriptor: (1~{R})-2-[4-[[4-bromanyl-3,5-bis(fluoranyl)phenyl]methylamino]cyclohexyl]-1-(6-methoxy-1,5-naphthyridin-4-yl)ethanol, (1~{S})-2-[4-[[4-bromanyl-3,5-bis(fluoranyl)phenyl]methylamino]cyclohexyl]-1-(6-methoxy-1,5-naphthyridin-4-yl)ethanol, DNA (5'-D(*AP*GP*CP*CP*GP*TP*AP*G)-3'), ...
Authors:Kokot, M, Hrast, M, Feng, L, Mitchenall, L.A, Lawson, D.M, Maxwell, A, Minovski, N, Anderluh, M.
Deposit date:2024-06-12
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Unraveling the Mycobacterium tuberculosis DNA gyrase-DNA-NBTI complex
To be published
9FOW
DownloadVisualize
BU of 9fow by Molmil
GPR180 N-terminal domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, GLYCEROL, ...
Authors:Mitrovic, S.A, Reindl, S, Nar, H.
Deposit date:2024-06-12
Release date:2024-10-16
Method:X-RAY DIFFRACTION (1.878 Å)
Cite:GPR180 a new member of the Golgi-dynamics domain seven-transmembrane helix protein family
To Be Published
9FOR
DownloadVisualize
BU of 9for by Molmil
Structure of heteromeric amyloid filament of TDP-43 and AXNA11 from FTLD-TDP Type C (variant 1)
Descriptor: Annexin A11, TAR DNA-binding protein 43
Authors:Arseni, D, Ryskeldi-Falcon, B.
Deposit date:2024-06-12
Release date:2024-07-24
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:Heteromeric amyloid filaments of ANXA11 and TDP-43 in FTLD-TDP Type C.
Nature, 2024
9FOF
DownloadVisualize
BU of 9fof by Molmil
Structure of heteromeric amyloid filament of TDP-43 and AXNA11 from FTLD-TDP Type C (variant 2)
Descriptor: Annexin A11, TAR DNA-binding protein 43
Authors:Arseni, D, Ryskeldi-Falcon, B.
Deposit date:2024-06-11
Release date:2024-07-24
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Heteromeric amyloid filaments of ANXA11 and TDP-43 in FTLD-TDP Type C.
Nature, 2024
9FO7
DownloadVisualize
BU of 9fo7 by Molmil
Cryo-EM structure of the BcsE2F2 regulatory subcomplex from the E. coli Bcs macrocomplex for cellulose secretion (local refinement)
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Cellulose biosynthesis protein BcsF, Cyclic di-GMP binding protein BcsE
Authors:Anso, I, Krasteva, P.V.
Deposit date:2024-06-11
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structural basis for synthase activation and cellulose modification in the E. coli Type II Bcs secretion system.
Nat Commun, 2024
9FO5
DownloadVisualize
BU of 9fo5 by Molmil
Coxsackievirus A9 bound with compound 19 (CL313)
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Plavec, Z, Butcher, S.J, Mitchell, C, Buckner, C.
Deposit date:2024-06-11
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:SAR Analysis of Novel Coxsackie virus A9 Capsid Binders.
J.Med.Chem., 2024
9FO3
DownloadVisualize
BU of 9fo3 by Molmil
Structure of a gp140 SpyTag-SpyCatcher mi3 nanoparticle including mi3 density only.
Descriptor: CAP255 gp140 SpyTag-SpyCatcher mi3,2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase,2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
Authors:Woodward, J.D, Malebo, K, Chapman, R.
Deposit date:2024-06-11
Release date:2024-10-09
Method:ELECTRON MICROSCOPY (5.3 Å)
Cite:Development of a Two-Component Nanoparticle Vaccine Displaying an HIV-1 Envelope Glycoprotein that Elicits Tier 2 Neutralising Antibodies.
Vaccines (Basel), 12, 2024
9FO2
DownloadVisualize
BU of 9fo2 by Molmil
Coxsackievirus A9 bound with compound 15 (CL278)
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Plavec, Z, Butcher, S.J, Mitchell, C, Buckner, C.
Deposit date:2024-06-11
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:SAR Analysis of Novel Coxsackie virus A9 Capsid Binders.
J.Med.Chem., 2024
9FNN
DownloadVisualize
BU of 9fnn by Molmil
Cryo-EM structure of the c-di-GMP-saturated 'crown'less Bcs macrocomplex for cellulose secretion in E. coli
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), ADENOSINE-5'-TRIPHOSPHATE, Cell division protein, ...
Authors:Anso, I, Krasteva, P.V.
Deposit date:2024-06-10
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structural basis for synthase activation and cellulose modification in the E. coli Type II Bcs secretion system.
Nat Commun, 2024
9FMZ
DownloadVisualize
BU of 9fmz by Molmil
Cryo-EM structure of the c-di-GMP-bound synthase:pEtN transferase complex (BcsA-Bct-G3) from the E. coli cellulose secretion macrocomplex
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Cellulose biosynthesis protein BcsG, Cellulose synthase catalytic subunit [UDP-forming], ...
Authors:Anso, I, Krasteva, P.V.
Deposit date:2024-06-07
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis for synthase activation and cellulose modification in the E. coli Type II Bcs secretion system.
Nat Commun, 2024

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon