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2QVR
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BU of 2qvr by Molmil
E. coli Fructose-1,6-bisphosphatase: Citrate, Fru-2,6-P2, and Mg2+ bound
Descriptor: 2,6-di-O-phosphono-beta-D-fructofuranose, CITRIC ACID, Fructose-1,6-bisphosphatase, ...
Authors:Hines, J.K, Fromm, H.J, Honzatko, R.B.
Deposit date:2007-08-08
Release date:2007-10-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structures of Mammalian and Bacterial Fructose-1,6-bisphosphatase Reveal the Basis for Synergism in AMP/Fructose 2,6-Bisphosphate Inhibition.
J.Biol.Chem., 282, 2007
5ERS
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BU of 5ers by Molmil
GephE in complex with Mg(2+) - AMP
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ADENOSINE MONOPHOSPHATE, ...
Authors:Kasaragod, V.B, Schindelin, H.
Deposit date:2015-11-15
Release date:2016-05-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Framework for Metal Incorporation during Molybdenum Cofactor Biosynthesis.
Structure, 24, 2016
6ANG
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BU of 6ang by Molmil
Crystal structure of PPK2 Class III in the complex with AMP from Cytophaga hutchinsonii ATCC 33406
Descriptor: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Polyphosphate:AMP phosphotransferase
Authors:Nocek, B, Joachimiak, A, Yakunin, A.
Deposit date:2017-08-13
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural Insights into Substrate Selectivity and Activity of Bacterial Polyphosphate Kinases
Acs Catalysis, 8, 2018
4CVM
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BU of 4cvm by Molmil
PaMurF in complex with AMP-PNP and UDP-MurNAc-tripeptide (mDAP)
Descriptor: ALANINE, GAMMA-D-GLUTAMIC ACID, MAGNESIUM ION, ...
Authors:Ruane, K.M, Majce, V.
Deposit date:2014-03-28
Release date:2015-04-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Pamurf in Complex with AMP-Pnp and Udp-Murnac-Tripeptide
To be Published
4KM5
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BU of 4km5 by Molmil
X-ray crystal structure of human cyclic GMP-AMP synthase (cGAS)
Descriptor: Cyclic GMP-AMP synthase, ZINC ION
Authors:Kranzusch, P.J, Lee, A.S.Y, Berger, J.M, Doudna, J.A.
Deposit date:2013-05-08
Release date:2013-05-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.499 Å)
Cite:Structure of Human cGAS Reveals a Conserved Family of Second-Messenger Enzymes in Innate Immunity.
Cell Rep, 3, 2013
1MF0
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BU of 1mf0 by Molmil
Structure of the Recombinant Mouse-Muscle Adenylosuccinate Synthetase Complexed with AMP, GDP, HPO4(2-), and Mg(2+)
Descriptor: ADENOSINE MONOPHOSPHATE, Adenylosuccinate Synthetase, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Iancu, C.V, Borza, T, Fromm, H.J, Honzatko, R.B.
Deposit date:2002-08-09
Release date:2002-10-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Feedback inhibition and product complexes of recombinant mouse muscle adenylosuccinate synthetase.
J.Biol.Chem., 277, 2002
1MF1
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BU of 1mf1 by Molmil
Structure of the Recombinant Mouse-Muscle Adenylosuccinate Synthetase Complexed with AMP
Descriptor: ACETATE ION, ADENOSINE MONOPHOSPHATE, Adenylosuccinate Synthetase
Authors:Iancu, C.V, Borza, T, Fromm, H.J, Honzatko, R.B.
Deposit date:2002-08-09
Release date:2002-10-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Feedback inhibition and product complexes of recombinant mouse muscle adenylosuccinate synthetase.
J.Biol.Chem., 277, 2002
2GXQ
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BU of 2gxq by Molmil
HERA N-terminal domain in complex with AMP, crystal form 1
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE MONOPHOSPHATE, heat resistant RNA dependent ATPase
Authors:Rudolph, M.G, Klostermeier, D.
Deposit date:2006-05-09
Release date:2006-08-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal Structure and Nucleotide Binding of the Thermus thermophilus RNA Helicase Hera N-terminal Domain.
J.Mol.Biol., 351, 2006
4JZ9
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BU of 4jz9 by Molmil
Carbamate kinase from Giardia lamblia bound to citric acid
Descriptor: CITRIC ACID, Carbamate kinase
Authors:Lim, K, Herzberg, O.
Deposit date:2013-04-02
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structures of Carbamate Kinase from Giardia lamblia Bound with Citric Acid and AMP-PNP.
Plos One, 8, 2013
4JZ8
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BU of 4jz8 by Molmil
Carbamate kinase from Giardia lamblia bound to citric acid
Descriptor: CITRIC ACID, Carbamate kinase
Authors:Lim, K, Herzberg, O.
Deposit date:2013-04-02
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of Carbamate Kinase from Giardia lamblia Bound with Citric Acid and AMP-PNP.
Plos One, 8, 2013
1FJ9
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BU of 1fj9 by Molmil
FRUCTOSE-1,6-BISPHOSPHATASE (MUTANT Y57W) PRODUCTS/ZN/AMP COMPLEX (T-STATE)
Descriptor: 6-O-phosphono-beta-D-fructofuranose, ADENOSINE MONOPHOSPHATE, FRUCTOSE-1,6-BISPHOSPHATASE, ...
Authors:Iancu, C.V, Choe, J.Y, Honzatko, R.B.
Deposit date:2000-08-07
Release date:2000-10-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Tryptophan fluorescence reveals the conformational state of a dynamic loop in recombinant porcine fructose-1,6-bisphosphatase.
Biochemistry, 39, 2000
5U7V
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BU of 5u7v by Molmil
Crystal structure of a nucleoside triphosphate diphosphohydrolase (NTPDase) from the legume Trifolium repens in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Apyrase
Authors:Cumming, M.H, Summers, E.L, Oulavallickal, T, Roberts, N, Arcus, V.L.
Deposit date:2016-12-12
Release date:2017-05-31
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structures and kinetics for plant nucleoside triphosphate diphosphohydrolases support a domain motion catalytic mechanism.
Protein Sci., 26, 2017
8XBK
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BU of 8xbk by Molmil
Crystal Structure of Human Liver Fructose-1,6-bisphosphatase Complexed with a Covalent Inhibitor
Descriptor: 1,2-ETHANEDIOL, Fructose-1,6-bisphosphatase 1, MAGNESIUM ION, ...
Authors:Cao, H, Zhang, X, Ren, Y, Wan, J.
Deposit date:2023-12-06
Release date:2024-11-20
Last modified:2024-12-11
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Structure-Guided Design of Affinity/Covalent-Bond Dual-Driven Inhibitors Targeting the AMP Site of FBPase.
J.Med.Chem., 67, 2024
5VN4
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BU of 5vn4 by Molmil
Crystal structure of adenine phosphoribosyl transferase from Trypanosoma brucei in complex with AMP, pyrophosphate, and ribose-5-phosphate
Descriptor: 5-O-phosphono-alpha-D-ribofuranose, ADENINE, Adenine phosphoribosyltransferase, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-04-28
Release date:2017-05-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of adenine phosphoribosyl transferase from Trypanosoma brucei in complex with AMP, pyrophosphate, and ribose-5-phosphate
to be published
7CTV
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BU of 7ctv by Molmil
Crystal structure of Arabidopsis thaliana SOBIR1 kinase domain D489A mutant in complex with AMP-PNP and magnesium
Descriptor: Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Wei, X, Wang, Y.L, Gu, T.Y, Xin, F.J.
Deposit date:2020-08-20
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8856113 Å)
Cite:Crystal structure of Arabidopsis thaliana SOBIR1 kinase domain D489A mutant in complex with AMP-PNP and magnesium
To Be Published
7CTX
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BU of 7ctx by Molmil
Crystal structure of Arabidopsis thaliana SOBIR1 kinase domain(residues 388-401 deleted) in complex with AMP-PNP and magnesium
Descriptor: Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Wei, X, Wang, Y.L, Gu, T.Y, Xin, F.J.
Deposit date:2020-08-20
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.907 Å)
Cite:Crystal structure of Arabidopsis thaliana SOBIR1 kinase domain(residues 388-401 deleted) in complex with AMP-PNP and magnesium
To Be Published
4HE1
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BU of 4he1 by Molmil
Crystal structure of human muscle fructose-1,6-bisphosphatase Q32R mutant complex with fructose-6-phosphate and phosphate
Descriptor: 6-O-phosphono-beta-D-fructofuranose, CHLORIDE ION, Fructose-1,6-bisphosphatase isozyme 2, ...
Authors:Shi, R, Zhu, D.W, Lin, S.X.
Deposit date:2012-10-03
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Crystal Structures of Human Muscle Fructose-1,6-Bisphosphatase: Novel Quaternary States, Enhanced AMP Affinity, and Allosteric Signal Transmission Pathway.
Plos One, 8, 2013
3L2B
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BU of 3l2b by Molmil
Crystal structure of the CBS and DRTGG domains of the regulatory region of Clostridium perfringens pyrophosphatase complexed with activator, diadenosine tetraphosphate
Descriptor: BIS(ADENOSINE)-5'-TETRAPHOSPHATE, Probable manganase-dependent inorganic pyrophosphatase
Authors:Tuominen, H, Salminen, A, Oksanen, E, Jamsen, J, Heikkila, O, Lehtio, L, Magretova, N.N, Goldman, A, Baykov, A.A, Lahti, R.
Deposit date:2009-12-15
Release date:2010-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Crystal Structures of the CBS and DRTGG Domains of the Regulatory Region of Clostridiumperfringens Pyrophosphatase Complexed with the Inhibitor, AMP, and Activator, Diadenosine Tetraphosphate.
J.Mol.Biol., 2010
2QRK
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BU of 2qrk by Molmil
Crystal Structure of AMP-bound Saccharopine Dehydrogenase (L-Lys Forming) from Saccharomyces cerevisiae
Descriptor: ADENOSINE MONOPHOSPHATE, Saccharopine dehydrogenase [NAD+, L-lysine-forming
Authors:Andi, B, Xu, H, Cook, P.F, West, A.H.
Deposit date:2007-07-28
Release date:2007-10-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structures of Ligand-Bound Saccharopine Dehydrogenase from Saccharomyces cerevisiae
Biochemistry, 46, 2007
6EA9
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BU of 6ea9 by Molmil
Structure of VACV Poxin in post-reactive state with Gp[2'-5']Ap[3']
Descriptor: 2',5'-GpAp, Protein B2
Authors:Eaglesham, J.B, Kranzusch, P.J.
Deposit date:2018-08-02
Release date:2019-02-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Viral and metazoan poxins are cGAMP-specific nucleases that restrict cGAS-STING signalling.
Nature, 566, 2019
7VGF
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BU of 7vgf by Molmil
cryo-EM structure of AMP-PNP bound human ABCB7
Descriptor: Iron-sulfur clusters transporter ABCB7, mitochondrial, MAGNESIUM ION, ...
Authors:Yan, Q, Yang, X, Shen, Y.
Deposit date:2021-09-16
Release date:2022-02-16
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of AMP-PNP-bound human mitochondrial ATP-binding cassette transporter ABCB7.
J.Struct.Biol., 214, 2022
7ELT
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BU of 7elt by Molmil
Crystal structure of Mycobacterium tuberculosis tryptophanyl-tRNA synthetase complexed with Trp-AMP
Descriptor: TRYPTOPHANYL-5'AMP, Tryptophan--tRNA ligase
Authors:Xu, M, Chen, S.
Deposit date:2021-04-12
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Investigate Natural Product Indolmycin and the Synthetically Improved Analogue Toward Antimycobacterial Agents.
Acs Chem.Biol., 17, 2022
6Z0Z
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BU of 6z0z by Molmil
Human wtSTING in complex with 3',3'-c-(2'FdAMP-2'FdAMP)
Descriptor: 2'-fluoro-,3',3'-c-di-AMP, Stimulator of interferon protein
Authors:Boura, E, Smola, M.
Deposit date:2020-05-11
Release date:2021-05-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.499 Å)
Cite:Ligand Strain and Its Conformational Complexity Is a Major Factor in the Binding of Cyclic Dinucleotides to STING Protein.
Angew.Chem.Int.Ed.Engl., 60, 2021
1Z6S
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BU of 1z6s by Molmil
Ribonuclease A- AMP complex
Descriptor: ADENOSINE MONOPHOSPHATE, Ribonuclease pancreatic
Authors:Hatzopoulos, G.N, Leonidas, D.D, Kardakaris, R, Kobe, J, Oikonomakos, N.G.
Deposit date:2005-03-23
Release date:2005-08-16
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The binding of IMP to Ribonuclease A
Febs J., 272, 2005
3BA6
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BU of 3ba6 by Molmil
Structure of the Ca2E1P phosphoenzyme intermediate of the SERCA Ca2+-ATPase
Descriptor: AMP PHOSPHORAMIDATE, CALCIUM ION, POTASSIUM ION, ...
Authors:Picard, M, Winther, A.M.L, Olesen, C, Gyrup, C, Morth, J.P, Oxvig, C, Moller, J.V, Nissen, P.
Deposit date:2007-11-07
Release date:2007-12-18
Last modified:2025-06-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The structural basis of calcium transport by the calcium pump.
Nature, 450, 2007

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