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4P01
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BU of 4p01 by Molmil
Crystal Structure Analysis of Macrophage Migration Inhibitory Factor in complex with N-[(4-cyanophenyl)methyl]methanethioamide
Descriptor: CHLORIDE ION, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Pantouris, G, Lolis, E.
Deposit date:2014-02-19
Release date:2014-03-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:An Analysis of MIF Structural Features that Control Functional Activation of CD74.
Chem.Biol., 22, 2015
7BBF
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BU of 7bbf by Molmil
Crystal structure of ubiquitin charged Ube2N (Ube2N~Ub) in complex with Ube2V2
Descriptor: Polyubiquitin-C, Ubiquitin-conjugating enzyme E2 N, Ubiquitin-conjugating enzyme E2 variant 2
Authors:Kiss, L, Neuhaus, D, James, L.C.
Deposit date:2020-12-17
Release date:2021-01-27
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:RING domains act as both substrate and enzyme in a catalytic arrangement to drive self-anchored ubiquitination.
Nat Commun, 12, 2021
8WQG
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BU of 8wqg by Molmil
cryo-EM structure of neddylated CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CCDC89 (conformation 1)
Descriptor: Cullin-2, E3 ubiquitin-protein ligase RBX1, N-terminally processed, ...
Authors:Chen, X, Zhang, K, Xu, C.
Deposit date:2023-10-11
Release date:2024-04-03
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (4.09 Å)
Cite:Mechanism of Psi-Pro/C-degron recognition by the CRL2 FEM1B ubiquitin ligase.
Nat Commun, 15, 2024
8VMA
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BU of 8vma by Molmil
The crystal structure of rhinovirus C15 RNA replication element sD-loop mutant in complex with Fab BL3-6
Descriptor: Heavy Chain of Fab BL3-6, Light Chain of Fab BL3-6, RNA (88-MER)
Authors:Das, N.K, Koirala, D.
Deposit date:2024-01-13
Release date:2024-07-24
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Structural basis for a highly conserved RNA-mediated enteroviral genome replication.
Nucleic Acids Res., 2024
8VOL
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BU of 8vol by Molmil
Apex domain deletion mutant of bacteriophage P2 central spike protein, membrane-piercing module
Descriptor: PHOSPHATIDYLETHANOLAMINE, Spike protein
Authors:Leiman, P.G, Miller, J.M.
Deposit date:2024-01-15
Release date:2024-08-07
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Function of the bacteriophage P2 baseplate central spike Apex domain in the infection process.
bioRxiv, 2023
8WQI
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BU of 8wqi by Molmil
Local refinement of FEM1B bound with the C-degron of CUX1
Descriptor: Protein CASP, Protein fem-1 homolog B
Authors:Chen, X, Zhang, K, Xu, C.
Deposit date:2023-10-11
Release date:2024-04-03
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Mechanism of Psi-Pro/C-degron recognition by the CRL2 FEM1B ubiquitin ligase.
Nat Commun, 15, 2024
8WQA
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BU of 8wqa by Molmil
Cryo-EM structure of CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CCDC89 (conformation 1)
Descriptor: Coiled-coil domain-containing protein 89, Cullin-2, E3 ubiquitin-protein ligase RBX1, ...
Authors:Chen, X, Zhang, K, Xu, C.
Deposit date:2023-10-11
Release date:2024-04-03
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Mechanism of Psi-Pro/C-degron recognition by the CRL2 FEM1B ubiquitin ligase.
Nat Commun, 15, 2024
8VOM
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BU of 8vom by Molmil
Double alanine Apex domain mutant of bacteriophage P2 central spike protein, membrane-piercing module
Descriptor: PHOSPHATIDYLETHANOLAMINE, Spike protein
Authors:Leiman, P.G, Miller, J.M.
Deposit date:2024-01-15
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Function of the bacteriophage P2 baseplate central spike Apex domain in the infection process.
bioRxiv, 2023
8WQB
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BU of 8wqb by Molmil
Cryo-EM structure of CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CCDC89 (conformation 2)
Descriptor: Coiled-coil domain-containing protein 89, Cullin-2, E3 ubiquitin-protein ligase RBX1, ...
Authors:Chen, X, Zhang, K, Xu, C.
Deposit date:2023-10-11
Release date:2024-04-03
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Mechanism of Psi-Pro/C-degron recognition by the CRL2 FEM1B ubiquitin ligase.
Nat Commun, 15, 2024
8VM9
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BU of 8vm9 by Molmil
The crystal structure of rhinovirus B14 RNA replication element sD-loop mutant in complex with Fab BL3-6
Descriptor: Heavy Chain of Fab BL3-6, Light Chain of Fab BL3-6, RNA (85-MER)
Authors:Das, N.K, Koirala, D.
Deposit date:2024-01-13
Release date:2024-07-24
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for a highly conserved RNA-mediated enteroviral genome replication.
Nucleic Acids Res., 2024
8WQH
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BU of 8wqh by Molmil
cryo-EM structure of neddylated CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CCDC89 (conformation 2)
Descriptor: Coiled-coil domain-containing protein 89, Cullin-2, E3 ubiquitin-protein ligase RBX1, ...
Authors:Chen, X, Zhang, K, Xu, C.
Deposit date:2023-10-11
Release date:2024-04-03
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Mechanism of Psi-Pro/C-degron recognition by the CRL2 FEM1B ubiquitin ligase.
Nat Commun, 15, 2024
8VON
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BU of 8von by Molmil
Double phenylalanine Apex domain mutant of bacteriophage P2 central spike protein, membrane-piercing module
Descriptor: PHOSPHATIDYLETHANOLAMINE, Spike protein
Authors:Leiman, P.G, Miller, J.M.
Deposit date:2024-01-15
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Function of the bacteriophage P2 baseplate central spike Apex domain in the infection process.
bioRxiv, 2023
7L1F
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BU of 7l1f by Molmil
SARS-CoV-2 RdRp in complex with 4 Remdesivir monophosphate
Descriptor: Non-structural protein 7, Non-structural protein 8, RNA (5'-R(P*AP*UP*UP*UP*UP*AP*AP*UP*AP*GP*CP*UP*UP*CP*UP*UP*AP*G)-3'), ...
Authors:Bravo, J.P.K, Taylor, D.W.
Deposit date:2020-12-14
Release date:2021-02-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.89 Å)
Cite:Remdesivir is a delayed translocation inhibitor of SARS-CoV-2 replication.
Mol.Cell, 81, 2021
4M4X
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BU of 4m4x by Molmil
Structure and Dimerization Properties of the Aryl Hydrocarbon Receptor (AHR) PAS-A Domain
Descriptor: Aryl hydrocarbon receptor
Authors:Wu, D, Potluri, N, Kim, Y, Rastinejad, F.
Deposit date:2013-08-07
Release date:2013-09-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.551 Å)
Cite:Structure and dimerization properties of the aryl hydrocarbon receptor PAS-A domain.
Mol.Cell.Biol., 33, 2013
8XB2
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BU of 8xb2 by Molmil
Structure of radafaxine-bound state of the human Norepinephrine Transporter
Descriptor: (2~{S},3~{S})-2-(3-chlorophenyl)-3,5,5-trimethyl-morpholin-2-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, GFP-MBP-solute carrier family 6 member 2,Maltose/maltodextrin-binding periplasmic protein,Sodium-dependent noradrenaline transporter,Maltose/maltodextrin-binding periplasmic protein,Sodium-dependent noradrenaline transporter
Authors:Wu, J.X, Ji, W.M.
Deposit date:2023-12-05
Release date:2024-07-10
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Substrate binding and inhibition mechanism of norepinephrine transporter.
Nature, 633, 2024
4M6S
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BU of 4m6s by Molmil
Crystal structure of the R111K:R132Y:Y134F:T54V:R59W:A32W mutant of the Cellular Retinoic Acid Binding Protein Type II in complex with All-Trans Retinal at 2.38 Angstrom Resolution
Descriptor: Cellular retinoic acid-binding protein 2, RETINAL
Authors:Nosrati, M, Geiger, J.H.
Deposit date:2013-08-10
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Rational Design of a Colorimetric pH Sensor from a Soluble Retinoic Acid Chaperone.
J.Am.Chem.Soc., 135, 2013
7KXT
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BU of 7kxt by Molmil
Crystal structure of human EED
Descriptor: 1-[(4-fluorophenyl)methyl]-N-{1-[2-(4-methoxyphenyl)ethyl]piperidin-4-yl}-1H-benzimidazol-2-amine, Polycomb protein EED, UNKNOWN ATOM OR ION
Authors:Zhu, L, Dong, A, Du, D, Liu, Y, Luo, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2020-12-04
Release date:2021-02-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure-Guided Development of Small-Molecule PRC2 Inhibitors Targeting EZH2-EED Interaction.
J.Med.Chem., 64, 2021
7T2X
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BU of 7t2x by Molmil
Estrogen Receptor Alpha Ligand Binding Domain Y537S in Complex with 2-chloro-4-((4-hydroxybenzyl)amino)-5-phenylthieno[2,3-d]pyrimidin-6-ol and GRIP Peptide
Descriptor: Estrogen receptor, Nuclear receptor coactivator 2, S-(2-chloro-6-{[(4-hydroxyphenyl)methyl]amino}pyrimidin-4-yl) phenylethanethioate
Authors:Joiner, C, Sammeta, V.K.R, Norris, J.D, McDonnell, D.P, Wilson, T.M, Fanning, S.W.
Deposit date:2021-12-06
Release date:2022-06-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A New Chemotype of Chemically Tractable Nonsteroidal Estrogens Based on a Thieno[2,3- d ]pyrimidine Core.
Acs Med.Chem.Lett., 13, 2022
7TFB
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BU of 7tfb by Molmil
P. polymyxa GS(14)-Q-GlnR peptide
Descriptor: GLUTAMINE, GlnR C-tail peptide, Glutamine synthetase, ...
Authors:Travis, B.A, Peck, J, Schumacher, M.A.
Deposit date:2022-01-06
Release date:2022-06-29
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (2.28 Å)
Cite:Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria.
Nat Commun, 13, 2022
7TFA
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BU of 7tfa by Molmil
P. polymyxa GS(12)-Q-GlnR peptide
Descriptor: GLUTAMINE, GlnR C-tail peptide, Glutamine synthetase, ...
Authors:Travis, B.A, Peck, J, Schumacher, M.A.
Deposit date:2022-01-06
Release date:2022-06-29
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (2.07 Å)
Cite:Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria.
Nat Commun, 13, 2022
7TF6
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BU of 7tf6 by Molmil
S. aureus GS(12)-Q-GlnR peptide
Descriptor: GLUTAMINE, Glutamine synthetase, MAGNESIUM ION, ...
Authors:Travis, B.A, Peck, J, Schumacher, M.A.
Deposit date:2022-01-06
Release date:2022-06-29
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (2.15 Å)
Cite:Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria.
Nat Commun, 13, 2022
7TFE
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BU of 7tfe by Molmil
L. monocytogenes GS(12) - apo
Descriptor: Glutamine synthetase, MAGNESIUM ION
Authors:Travis, B.A, Peck, J, Schumacher, M.A.
Deposit date:2022-01-06
Release date:2022-06-29
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria.
Nat Commun, 13, 2022
7TDP
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BU of 7tdp by Molmil
Structure of Paenibacillus polymyxa GS bound to Met-Sox-P-ADP (Transition state complex) to 1.98 Angstom
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Glutamine synthetase, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, ...
Authors:Schumacher, M.A.
Deposit date:2022-01-02
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria.
Nat Commun, 13, 2022
7TF9
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BU of 7tf9 by Molmil
L. monocytogenes GS(14)-Q-GlnR peptide
Descriptor: C-tail peptide of Glutamine synthetase repressor, GLUTAMINE, Glutamine synthetase, ...
Authors:Travis, B.A, Peck, J, Schumacher, M.A.
Deposit date:2022-01-06
Release date:2022-06-29
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (2.61 Å)
Cite:Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria.
Nat Commun, 13, 2022
7TDV
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BU of 7tdv by Molmil
Crystal structure of S. aureus glutamine synthetase in Met-Sox-P/ADP transition state complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Glutamine synthetase, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, ...
Authors:Schumacher, M.A.
Deposit date:2022-01-03
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria.
Nat Commun, 13, 2022

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PDB entries from 2024-10-16

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