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5KD7	Crystal Structure of Murine MHC-I H-2Dd in complex with Murine Beta2-Microglobulin and a Variant of Peptide (PV9) of HIV gp120 MN Isolate (IGPGRAFYV) Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ... Authors: Jiang, J, Natarajan, K, Margulies, D. Deposit date: 2016-06-07 Release date: 2017-10-11 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Effects of Cross-Presentation, Antigen Processing, and Peptide Binding in HIV Evasion of T Cell Immunity. J. Immunol., 200, 2018
5KD4	Crystal Structure of Murine MHC-I H-2Dd in complex with Murine Beta2-Microglobulin and a Variant of Peptide (PVI10) of HIV gp120 MN Isolate (IGPGRAFYVI) Descriptor: Beta-2-microglobulin, H-2 class I histocompatibility antigen, D-D alpha chain, ... Authors: Jiang, J, Natarajan, K, Margulies, D. Deposit date: 2016-06-07 Release date: 2017-10-11 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (3.05 Å) Cite: Effects of Cross-Presentation, Antigen Processing, and Peptide Binding in HIV Evasion of T Cell Immunity. J. Immunol., 200, 2018
6XJA	Streptococcus Pneumoniae IgA1 Protease with IgA1 substrate Descriptor: Immunoglobulin A1 protease, Immunoglobulin alpha-1 heavy chain, Immunoglobulin alpha-1 light chain, ... Authors: Eisenmesser, E.Z, Zheng, H. Deposit date: 2020-06-23 Release date: 2021-01-20 Method: ELECTRON MICROSCOPY (4 Å) Cite: Mechanism and inhibition of Streptococcus pneumoniae IgA1 protease. Nat Commun, 11, 2020
5T7G	Crystal Structure of Murine MHC-I H-2Dd in complex with Murine Beta2-Microglobulin and a Variant of Peptide (PT9) of HIV gp120 MN Isolate (IGPGRAFYT) Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ... Authors: Jiang, J, Natarajan, K, Margulies, D. Deposit date: 2016-09-04 Release date: 2017-10-11 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.961 Å) Cite: Effects of Cross-Presentation, Antigen Processing, and Peptide Binding in HIV Evasion of T Cell Immunity. J. Immunol., 200, 2018
8A05	Bacteriophage phiCjT23 spike protein penton domain Descriptor: Spike protein P13 N-terminal, capsid internal domain, Unknown vertex protein Authors: Rissanen, I, Huiskonen, J.T. Deposit date: 2022-05-26 Release date: 2022-12-14 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Cryo-EM structure of ssDNA bacteriophage Phi CjT23 provides insight into early virus evolution. Nat Commun, 13, 2022
7PMY	HsPepT2 bound to Ala-Phe in the inward facing partially occluded conformation Descriptor: ALA-PHE, Solute carrier family 15 member 2 Authors: Killer, M, Wald, J, Pieprzyk, J, Marlovits, T.C, Loew, C. Deposit date: 2021-09-04 Release date: 2021-10-20 Last modified: 2021-11-17 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Structural snapshots of human PepT1 and PepT2 reveal mechanistic insights into substrate and drug transport across epithelial membranes. Sci Adv, 7, 2021
7PMX	HsPepT1 bound to Ala-Phe in the outward facing open conformation Descriptor: ALA-PHE, Solute carrier family 15 member 1 Authors: Killer, M, Wald, J, Pieprzyk, J, Marlovits, T.C, Loew, C. Deposit date: 2021-09-03 Release date: 2021-10-20 Last modified: 2021-11-17 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Structural snapshots of human PepT1 and PepT2 reveal mechanistic insights into substrate and drug transport across epithelial membranes. Sci Adv, 7, 2021
7PMW	HsPepT1 bound to Ala-Phe in the outward facing occluded conformation Descriptor: ALA-PHE, Solute carrier family 15 member 1 Authors: Killer, M, Wald, J, Pieprzyk, J, Marlovits, T.C, Loew, C. Deposit date: 2021-09-03 Release date: 2021-10-20 Last modified: 2021-11-17 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Structural snapshots of human PepT1 and PepT2 reveal mechanistic insights into substrate and drug transport across epithelial membranes. Sci Adv, 7, 2021
7PN1	Apo HsPepT1 in the outward facing open conformation Descriptor: Solute carrier family 15 member 1 Authors: Killer, M, Wald, J, Pieprzyk, J, Marlovits, T.C, Loew, C. Deposit date: 2021-09-04 Release date: 2021-10-20 Last modified: 2021-11-17 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Structural snapshots of human PepT1 and PepT2 reveal mechanistic insights into substrate and drug transport across epithelial membranes. Sci Adv, 7, 2021
8FWH	Crystal structure of bivalent antibody Fab fragment of Anti-human LAG3 (22D2) Descriptor: 1,2-ETHANEDIOL, Anti-human LAG3 (22D2) heavy chain, Anti-human LAG3 (22D2) light chain Authors: Mishra, A.K, Agnihotri, P, Mariuzza, R.A. Deposit date: 2023-01-22 Release date: 2023-09-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.833 Å) Cite: CryoEM structure of a therapeutic antibody (favezelimab) bound to human LAG3 determined using a bivalent Fab as fiducial marker. Structure, 31, 2023
6S8U	Structure of the PfEMP1 IT4var13 DBLbeta domain bound to ICAM-1 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Erythrocyte membrane protein 1, ... Authors: Lennartz, F, Higgins, M.K. Deposit date: 2019-07-10 Release date: 2019-09-25 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (3.67 Å) Cite: Structural insights into diverse modes of ICAM-1 binding byPlasmodium falciparum-infected erythrocytes. Proc.Natl.Acad.Sci.USA, 116, 2019
6PPG	Crystal structure of IL17FF bound to Fab fragments of MCAF5352A Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CADMIUM ION, Fab MCAF5352A heavy chain, ... Authors: Huang, C.S, Yin, J.P, Hymowitz, S.G. Deposit date: 2019-07-06 Release date: 2019-12-11 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.75 Å) Cite: Dissecting the molecular basis of high viscosity of monospecific and bispecific IgG antibodies. Mabs, 12
7RP3	Crystal structure of GNE-1952 alkylated KRAS G12C in complex with 2H11 CLAMP Descriptor: 1,2-ETHANEDIOL, 1-[4-[6-chloranyl-7-(5-methyl-1~{H}-indazol-4-yl)quinazolin-4-yl]piperazin-1-yl]propan-1-one, GLYCEROL, ... Authors: Oh, A, Tam, C, Wang, W. Deposit date: 2021-08-03 Release date: 2022-03-16 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2 Å) Cite: Conformation-locking antibodies for the discovery and characterization of KRAS inhibitors. Nat.Biotechnol., 40, 2022
7RP2	Crystal structure of Kas G12C in complex with 2H11 CLAMP Descriptor: 1,2-ETHANEDIOL, CACODYLATE ION, GTPase KRas, ... Authors: Oh, A, Tam, C, Wang, W. Deposit date: 2021-08-03 Release date: 2022-03-16 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Conformation-locking antibodies for the discovery and characterization of KRAS inhibitors. Nat.Biotechnol., 40, 2022
6WKM	Fab Fragment of Anti-human LAG3 antibody (22D2) Descriptor: 22D2 Fab Heavy Chain, 22D2 Fab Light Chain Authors: Agnihotri, P, Mishra, A.K, Mariuzza, R.A. Deposit date: 2020-04-16 Release date: 2021-04-21 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.1 Å) Cite: CryoEM structure of a therapeutic antibody (favezelimab) bound to human LAG3 determined using a bivalent Fab as fiducial marker. Structure, 2023
8HPK	Crystal structure of the bacterial oxalate transporter OxlT in an oxalate-bound occluded form Descriptor: Fab fragment Heavy chein, Fab fragment Light chain, OXALATE ION, ... Authors: Shimamura, T, Hirai, T, Yamashita, A. Deposit date: 2022-12-12 Release date: 2023-02-15 Last modified: 2023-04-12 Method: X-RAY DIFFRACTION (3 Å) Cite: Structure and mechanism of oxalate transporter OxlT in an oxalate-degrading bacterium in the gut microbiota. Nat Commun, 14, 2023
4Q65	Structure of the E. coli Peptide Transporter YbgH Descriptor: Dipeptide permease D Authors: Zhang, C, Zhao, Y, Mao, G, Liu, M, Wang, X. Deposit date: 2014-04-21 Release date: 2014-08-13 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (3.4 Å) Cite: Crystal structure of the E. coli peptide transporter YbgH. Structure, 22, 2014
3IVK	Crystal Structure of the Catalytic Core of an RNA Polymerase Ribozyme Complexed with an Antigen Binding Antibody Fragment Descriptor: CADMIUM ION, CHLORIDE ION, Fab heavy chain, ... Authors: Koldobskaya, Y, Duguid, E.M, Shechner, D.M, Koide, S, Kossiakoff, A.A, Bartel, D.P, Piccirilli, J.A. Deposit date: 2009-09-01 Release date: 2010-03-02 Last modified: 2017-11-01 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Crystal structure of the catalytic core of an RNA-polymerase ribozyme. Science, 326, 2009
7JGJ	IgA1 Protease in complex with neutralizing mAb Descriptor: Immunoglobulin A1 protease, mAB Heavy Chain, mAB Light Chain Authors: Eisenmesser, E.Z, Zheng, H. Deposit date: 2020-07-19 Release date: 2020-12-09 Method: ELECTRON MICROSCOPY (4.8 Å) Cite: Mechanism and inhibition of Streptococcus pneumoniae IgA1 protease Nat Commun, 11, 2020
1ES0	CRYSTAL STRUCTURE OF THE MURINE CLASS II ALLELE I-A(G7) COMPLEXED WITH THE GLUTAMIC ACID DECARBOXYLASE (GAD65) PEPTIDE 207-220 Descriptor: 65 KD GLUTAMIC ACID DECARBOXYLASE+H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN, H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN Authors: Corper, A.L, Teyton, L, Wilson, I.A. Deposit date: 2000-04-07 Release date: 2000-06-28 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.6 Å) Cite: A structural framework for deciphering the link between I-Ag7 and autoimmune diabetes. Science, 288, 2000
7KPB	Human TNF-alpha TNFR1 complex bound to conformationally selective antibody Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-(1-{[2-(difluoromethoxy)phenyl]methyl}-2-{[3-(2-oxopyrrolidin-1-yl)phenoxy]methyl}-1H-benzimidazol-6-yl)pyridin-2(1H)-one, Fab1974 - Heavy Chain, ... Authors: Fox III, D, Conrady, D.G, Lowe, M, Ceska, T. Deposit date: 2020-11-10 Release date: 2021-01-13 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (3 Å) Cite: A conformation-selective monoclonal antibody against a small molecule-stabilised signalling-deficient form of TNF Nat Commun, 12, 2021
8RBX	Structure of Integrator-PP2A bound to a paused RNA polymerase II-DSIF-NELF-nucleosome complex Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... Authors: Fianu, I, Ochmann, M, Walshe, J.L, Cramer, P. Deposit date: 2023-12-05 Release date: 2024-02-07 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Structural basis of Integrator-dependent RNA polymerase II termination. Nature, 629, 2024
8S5N	RNA polymerase II core initially transcribing complex with an ordered RNA of 12 nt Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... Authors: Zhan, Y, Grabbe, F, Oberbeckmann, E, Dienemann, C, Cramer, P. Deposit date: 2024-02-24 Release date: 2024-04-10 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Three-step mechanism of promoter escape by RNA polymerase II. Mol.Cell, 84, 2024
8S55	RNA polymerase II early elongation complex bound to TFIIE and TFIIF - state a (composite structure) Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... Authors: Zhan, Y, Grabbe, F, Oberbeckmann, E, Dienemann, C, Cramer, P. Deposit date: 2024-02-22 Release date: 2024-04-17 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Three-step mechanism of promoter escape by RNA polymerase II. Mol.Cell, 84, 2024
8S54	RNA polymerase II early elongation complex bound to TFIIE and TFIIF - state b (composite structure) Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... Authors: Zhan, Y, Grabber, F, Oberbeckmann, E, Dienemann, C, Cramer, P. Deposit date: 2024-02-22 Release date: 2024-04-17 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Three-step mechanism of promoter escape by RNA polymerase II. Mol.Cell, 84, 2024

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