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1Q9K
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BU of 1q9k by Molmil
S25-2 Fab Unliganded 1
Descriptor: MAGNESIUM ION, S25-2 Fab (IgG1k) heavy chain, S25-2 Fab (IgG1k) light chain
Authors:Nguyen, H.P, Seto, N.O, MacKenzie, C.R, Brade, L, Kosma, P, Brade, H, Evans, S.V.
Deposit date:2003-08-25
Release date:2004-01-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Germline antibody recognition of distinct carbohydrate epitopes.
Nat.Struct.Biol., 10, 2003
8C7K
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BU of 8c7k by Molmil
YdaS from E. coli O157:H7 cryptic prophage CP-933P
Descriptor: Phage antirepressor protein Cro
Authors:Prolic-Kalinsek, M, Volkov, A.N, Loris, R.
Deposit date:2023-01-16
Release date:2023-01-25
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structural basis of DNA binding by YdaT, a functional equivalent of the CII repressor in the cryptic prophage CP-933P from Escherichia coli O157:H7.
Acta Crystallogr D Struct Biol, 79, 2023
1NS0
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BU of 1ns0 by Molmil
Crystal structure of galactose mutarotase from Lactococcus lactis mutant E304Q complexed with galactose
Descriptor: GALACTOSE MUTAROTASE, SODIUM ION, alpha-D-galactopyranose
Authors:Holden, H.M, Thoden, J.B.
Deposit date:2003-01-27
Release date:2003-02-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Catalytic Mechanism of Galactose Mutarotase
Protein Sci., 12, 2003
7AS5
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BU of 7as5 by Molmil
126 helix bundle DNA nanostructure
Descriptor: SCAFFOLD STRAND, STAPLE STRAND
Authors:Kube, M, Kohler, F, Feigl, E, Nagel-Yuksel, B, Willner, E.M, Funke, J.J, Gerling, T, Stommer, P, Honemann, M.N, Martin, T.G, Scheres, S.H.W, Dietz, H.
Deposit date:2020-10-27
Release date:2020-11-18
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (9.8 Å)
Cite:Revealing the structures of megadalton-scale DNA complexes with nucleotide resolution.
Nat Commun, 11, 2020
2FMZ
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BU of 2fmz by Molmil
Carbonic anhydrase activators. Activation of isoforms I, II, IV, VA, VII and XIV with L- and D- phenylalanine, structure with D-Phenylalanine.
Descriptor: Carbonic anhydrase 2, D-PHENYLALANINE, MERCURY (II) ION, ...
Authors:Temperini, C, Scozzafava, A, Vullo, D, Supuran, C.T.
Deposit date:2006-01-10
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Carbonic Anhydrase Activators. Activation of Isoforms I, II, IV, VA, VII, and XIV with l- and d-Phenylalanine and Crystallographic Analysis of Their Adducts with Isozyme II: Stereospecific Recognition within the Active Site of an Enzyme and Its Consequences for the Drug Design.
J.Med.Chem., 49, 2006
5IK1
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BU of 5ik1 by Molmil
Open state of P450cam after soaking in camphor
Descriptor: CAMPHOR, Camphor 5-monooxygenase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Mahomed, M, Goodin, D.B, Lee, Y.-T.
Deposit date:2016-03-03
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Effector Roles of Putidaredoxin on Cytochrome P450cam Conformational States.
J.Am.Chem.Soc., 138, 2016
1NS7
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BU of 1ns7 by Molmil
Crystal structure of galactose mutarotase from Lactococcus lactis mutant E304A complexed with glucose
Descriptor: GALACTOSE MUTAROTASE, SODIUM ION, beta-D-glucopyranose
Authors:Holden, H.M, Thoden, J.B.
Deposit date:2003-01-27
Release date:2003-02-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Catalytic Mechanism of Galactose Mutarotase
Protein Sci., 12, 2003
1L4M
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BU of 1l4m by Molmil
Crystal Structure of CobT complexed with 2-amino-p-cresol and nicotinate mononucleotide
Descriptor: 2-AMINO-P-CRESOL, NICOTINATE MONONUCLEOTIDE, Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
Authors:Cheong, C.-G, Escalante-Semerena, J, Rayment, I.
Deposit date:2002-03-06
Release date:2002-09-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Capture of a labile substrate by expulsion of water molecules from the active site of nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) from Salmonella enterica.
J.Biol.Chem., 277, 2002
1TF4
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BU of 1tf4 by Molmil
ENDO/EXOCELLULASE FROM THERMOMONOSPORA
Descriptor: CALCIUM ION, T. FUSCA ENDO/EXO-CELLULASE E4 CATALYTIC DOMAIN AND CELLULOSE-BINDING DOMAIN
Authors:Sakon, J, Wilson, D.B, Karplus, P.A.
Deposit date:1997-05-30
Release date:1997-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and mechanism of endo/exocellulase E4 from Thermomonospora fusca.
Nat.Struct.Biol., 4, 1997
8P5R
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BU of 8p5r by Molmil
Crystal structure of full-length, homohexameric 2-oxoglutarate dehydrogenase KGD from Mycobacterium smegmatis in complex with GarA
Descriptor: CALCIUM ION, Glycogen accumulation regulator GarA, MAGNESIUM ION, ...
Authors:Wagner, T, Mechaly, A.M, Alzari, P.M, Bellinzoni, M.
Deposit date:2023-05-24
Release date:2023-08-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (4.562 Å)
Cite:High resolution cryo-EM and crystallographic snapshots of the actinobacterial two-in-one 2-oxoglutarate dehydrogenase.
Nat Commun, 14, 2023
7VQM
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BU of 7vqm by Molmil
GH2 beta-galacturonate AqGalA in complex with galacturonide
Descriptor: CHLORIDE ION, GH2 beta-galacturonate AqGalA, beta-D-galactopyranuronic acid
Authors:Yang, J.
Deposit date:2021-10-20
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and Biochemical Basis of a Marine Bacterial Glycoside Hydrolase Family 2 beta-Glycosidase with Broad Substrate Specificity
Appl.Environ.Microbiol., 88, 2022
1AQB
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BU of 1aqb by Molmil
RETINOL-BINDING PROTEIN (RBP) FROM PIG PLASMA
Descriptor: CADMIUM ION, RETINOL, RETINOL-BINDING PROTEIN
Authors:Zanotti, G, Panzalorto, M, Marcato, A, Malpeli, G, Folli, C, Berni, R.
Deposit date:1997-07-28
Release date:1998-01-28
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of pig plasma retinol-binding protein at 1.65 A resolution.
Acta Crystallogr.,Sect.D, 54, 1998
1O16
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BU of 1o16 by Molmil
RECOMBINANT SPERM WHALE MYOGLOBIN H64D/V68S/D122N MUTANT (MET)
Descriptor: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Phillips Jr, G.N.
Deposit date:2002-10-25
Release date:2003-11-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Molecular engineering of myoglobin: influence of residue 68 on the rate and the enantioselectivity of oxidation reactions catalyzed by H64D/V68X myoglobin
Biochemistry, 42, 2003
1JS4
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BU of 1js4 by Molmil
ENDO/EXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA
Descriptor: CALCIUM ION, ENDO/EXOCELLULASE E4, beta-D-glucopyranose, ...
Authors:Sakon, J, Wilson, D.B, Karplus, P.A.
Deposit date:1997-05-30
Release date:1997-09-17
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and mechanism of endo/exocellulase E4 from Thermomonospora fusca.
Nat.Struct.Biol., 4, 1997
1QNG
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BU of 1qng by Molmil
Plasmodium falciparum Cyclophilin complexed with Cyclosporin A
Descriptor: CYCLOSPORIN A, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Authors:Peterson, M.R, Hall, D.R, Hunter, W.N.
Deposit date:1999-10-14
Release date:2000-10-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Three-Dimensional Structure of a Plasmodium Falciparum Cyclophilin in Complex with the Potent Anti-Malarial Cyclosporin A
J.Mol.Biol., 298, 2000
3BXV
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BU of 3bxv by Molmil
Crystal structure studies on sulfur oxygenase reductase from Acidianus tengchongensis
Descriptor: FE (III) ION, Sulfur oxygenase/reductase
Authors:Chang, W.R, Li, M.
Deposit date:2008-01-14
Release date:2009-01-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure studies on sulfur oxygenase reductase from Acidianus tengchongensis
Biochem.Biophys.Res.Commun., 369, 2008
2GVX
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BU of 2gvx by Molmil
Structure of diisopropyl fluorophosphatase (DFPase), mutant D229N / N175D
Descriptor: CALCIUM ION, diisopropyl fluorophosphatase
Authors:Blum, M.-M, Lohr, F, Richardt, A, Ruterjans, H, Chen, J.C.-H.
Deposit date:2006-05-03
Release date:2006-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Binding of a Designed Substrate Analogue to Diisopropyl Fluorophosphatase: Implications for the Phosphotriesterase Mechanism
J.Am.Chem.Soc., 128, 2006
7K96
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BU of 7k96 by Molmil
Human DNA polymerase beta ternary complex with templating cytosine and incoming deoxyguanosine diphosphate
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYGUANOSINE-5'-DIPHOSPHATE, CALCIUM ION, ...
Authors:Varela, F.A, Freudenthal, B.D.
Deposit date:2020-09-28
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanism of Deoxyguanosine Diphosphate Insertion by Human DNA Polymerase beta.
Biochemistry, 60, 2021
7DTY
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BU of 7dty by Molmil
Structural basis of ligand selectivity conferred by the human glucose-dependent insulinotropic polypeptide receptor
Descriptor: CHOLESTEROL, Gastric inhibitory polypeptide, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Zhao, F.H, Zhang, C, Zhou, Q.T, Hang, K.N, Zou, X.Y, Chen, Y, Wu, F, Rao, Q.D, Dai, A.T, Yin, W.C, Shen, D.D, Zhang, Y, Xia, T, Stevens, R.C, Xu, H.E, Yang, D.H, Zhao, L.H, Wang, M.W.
Deposit date:2021-01-06
Release date:2021-08-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Structural insights into hormone recognition by the human glucose-dependent insulinotropic polypeptide receptor.
Elife, 10, 2021
1Q9L
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BU of 1q9l by Molmil
S25-2 Fab Unliganded 2
Descriptor: MAGNESIUM ION, S25-2 Fab (IgG1k) heavy chain, S25-2 Fab (IgG1k) light chain, ...
Authors:Nguyen, H.P, Seto, N.O, MacKenzie, C.R, Brade, L, Kosma, P, Brade, H, Evans, S.V.
Deposit date:2003-08-25
Release date:2004-01-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Germline antibody recognition of distinct carbohydrate epitopes.
Nat.Struct.Biol., 10, 2003
1V8Q
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BU of 1v8q by Molmil
Crystal structure of ribosomal protein L27 from Thermus thermophilus HB8
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, TT0826
Authors:Wang, H, Takemoto-Hori, C, Murayama, K, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-13
Release date:2004-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of ribosomal protein L27 from Thermus thermophilus HB8
Protein Sci., 13, 2004
5MBY
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BU of 5mby by Molmil
Crystal Structure of Arg184Gln mutant of Human Prolidase with Mn ions and GlyPro ligand
Descriptor: GLYCEROL, GLYCINE, HYDROXIDE ION, ...
Authors:Wilk, P, Piwowarczyk, R, Mueller, U, Dobbek, H, Weiss, M.S.
Deposit date:2016-11-09
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for prolidase deficiency disease mechanisms.
FEBS J., 285, 2018
5O9Q
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Crystal structure of ScGas2 in complex with compound 6
Descriptor: (2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{R},3~{R},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{R},3~{R},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-3,5-bis(oxidanyl)-6-[4-(phenylmethoxymethyl)-1,2,3-triazol-1-yl]oxan-4-yl]oxy-3,5-bis(oxidanyl)oxan-4-yl]oxy-oxane-3,4,5-triol, 1,3-beta-glucanosyltransferase GAS2, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose
Authors:Delso, I, Valero-Gonzalez, J, Gomollon-Bel, F, Castro-Lopez, J, Fang, W, Navratilova, I, Van Aalten, D, Tejero, T, Merino, P, Hurtado-Guerrero, R.
Deposit date:2017-06-20
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Inhibitors against Fungal Cell Wall Remodeling Enzymes.
ChemMedChem, 13, 2018
1VAH
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BU of 1vah by Molmil
Crystal structure of the pig pancreatic-amylase complexed with r-nitrophenyl-a-D-maltoside
Descriptor: Alpha-amylase, pancreatic, CALCIUM ION, ...
Authors:Zhuo, H, Payan, F, Qian, M.
Deposit date:2004-02-17
Release date:2005-04-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the pig pancreatic alpha-amylase complexed with rho-nitrophenyl-alpha-D-maltoside-flexibility in the active site
Protein J., 23, 2004
5MPT
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BU of 5mpt by Molmil
Structure of the citrinin polyketide synthase CMeT domain
Descriptor: 1,2-ETHANEDIOL, Citrinin polyketide synthase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Herbst, D.A, Storm, P.A, Townsend, C.A, Maier, T.
Deposit date:2016-12-19
Release date:2017-02-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.648 Å)
Cite:Functional and Structural Analysis of Programmed C-Methylation in the Biosynthesis of the Fungal Polyketide Citrinin.
Cell Chem Biol, 24, 2017

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