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PDB: 123 results

2UKD
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BU of 2ukd by Molmil
UMP/CMP KINASE FROM SLIME MOLD COMPLEXED WITH ADP, CMP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CYTIDINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ...
Authors:Schlichting, I, Reinstein, J.
Deposit date:1997-05-20
Release date:1998-05-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of active conformations of UMP kinase from Dictyostelium discoideum suggest phosphoryl transfer is associative.
Biochemistry, 36, 1997
5XRU
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BU of 5xru by Molmil
Crystal structure of Notothenia coriiceps adenylate kinase variant
Descriptor: BIS(ADENOSINE)-5'-PENTAPHOSPHATE, SULFATE ION, adenylate kinase
Authors:Bae, E, Kim, J, Moon, S.
Deposit date:2017-06-09
Release date:2018-06-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analyses of adenylate kinases from Antarctic and tropical fishes for understanding cold adaptation of enzymes
Sci Rep, 7, 2017
2XB4
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BU of 2xb4 by Molmil
Crystal structures of zinc containing Adenylate kinase from Desulfovibrio gigas
Descriptor: ADENYLATE KINASE, S,R MESO-TARTARIC ACID, ZINC ION
Authors:Mukhopadhyay, A, Kladova, A.V, Gavel, O.Y, Calvete, J.J, Shnyrov, V.L, Moura, I, Moura, J.J.G, Bursakov, S.A, Romao, M.J, Trincao, J.
Deposit date:2010-04-05
Release date:2010-09-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the Zinc-, Cobalt-, and Iron-Containing Adenylate Kinase from Desulfovibrio Gigas: A Novel Metal-Containing Adenylate Kinase from Gram-Negative Bacteria.
J.Biol.Inorg.Chem., 16, 2011
5X6K
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BU of 5x6k by Molmil
Crystal structure of adenylate kinase
Descriptor: BIS(ADENOSINE)-5'-PENTAPHOSPHATE, SULFATE ION, adenylate kinase isoenzyme 1
Authors:Moon, S, Bae, E.
Deposit date:2017-02-22
Release date:2018-02-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural analyses of adenylate kinases from Antarctic and tropical fishes for understanding cold adaptation of enzymes
Sci Rep, 7, 2017
5X6L
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BU of 5x6l by Molmil
Crystal structure of Notothenia coriiceps adenylate kinase variant
Descriptor: BIS(ADENOSINE)-5'-PENTAPHOSPHATE, SULFATE ION, adenylate kinase
Authors:Bae, E, Moon, S, Kim, J.
Deposit date:2017-02-22
Release date:2018-02-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.862 Å)
Cite:TBD
To Be Published
4NTZ
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BU of 4ntz by Molmil
Crystal structure of Adenylate kinase from Streptococcus pneumoniae
Descriptor: Adenylate kinase, SULFATE ION
Authors:Thach, T.T, Luong, T.T, Lee, S.H, Rhee, D.K.
Deposit date:2013-12-03
Release date:2014-07-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Adenylate kinase from Streptococcus pneumoniae is essential for growth through its catalytic activity
FEBS Open Bio, 4, 2014
4NU0
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BU of 4nu0 by Molmil
Crystal structure of Adenylate kinase from Streptococcus pneumoniae with Ap5A
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION
Authors:Thach, T.T, Luong, T.T, Lee, S.H, Rhee, D.K.
Deposit date:2013-12-03
Release date:2014-07-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.485 Å)
Cite:Adenylate kinase from Streptococcus pneumoniae is essential for growth through its catalytic activity
FEBS Open Bio, 4, 2014
1UKE
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BU of 1uke by Molmil
UMP/CMP KINASE FROM SLIME MOLD
Descriptor: MAGNESIUM ION, P1-(ADENOSINE-5'-P5-(URIDINE-5')PENTAPHOSPHATE, URIDYLMONOPHOSPHATE/CYTIDYLMONOPHOSPHATE KINASE
Authors:Scheffzek, K, Kliche, W, Wiesmueller, L, Reinstein, J.
Deposit date:1998-01-07
Release date:1998-04-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the complex of UMP/CMP kinase from Dictyostelium discoideum and the bisubstrate inhibitor P1-(5'-adenosyl) P5-(5'-uridyl) pentaphosphate (UP5A) and Mg2+ at 2.2 A: implications for water-mediated specificity.
Biochemistry, 35, 1996
1UKZ
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SUBSTRATE SPECIFICITY AND ASSEMBLY OF CATALYTIC CENTER DERIVED FROM TWO STRUCTURES OF LIGATED URIDYLATE KINASE
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, URIDYLATE KINASE
Authors:Mueller-Dieckmann, H.-J, Schulz, G.E.
Deposit date:1994-07-13
Release date:1995-01-26
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Substrate specificity and assembly of the catalytic center derived from two structures of ligated uridylate kinase.
J.Mol.Biol., 246, 1995
1Z83
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Crystal structure of human AK1A in complex with AP5A
Descriptor: Adenylate kinase 1, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, SULFATE ION, ...
Authors:Filippakopoulos, P, Bunkoczi, G, Jansson, A, Schreurs, A, Knapp, S, Edwards, A, von Delft, F, Sundstrom, M, Structural Genomics Consortium (SGC)
Deposit date:2005-03-29
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of human AK1A in complex with AP5A
To be Published
1ZAK
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BU of 1zak by Molmil
ADENYLATE KINASE FROM MAIZE IN COMPLEX WITH THE INHIBITOR P1,P5-BIS(ADENOSINE-5'-)PENTAPHOSPHATE (AP5A)
Descriptor: ADENYLATE KINASE, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
Authors:Wild, K, Schulz, G.E.
Deposit date:1997-05-31
Release date:1998-04-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure, catalysis and supramolecular assembly of adenylate kinase from maize.
Eur.J.Biochem., 250, 1997
2CDN
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BU of 2cdn by Molmil
Crystal structure of Mycobacterium tuberculosis adenylate kinase complexed with two molecules of ADP and Mg
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENYLATE KINASE, MAGNESIUM ION
Authors:Bellinzoni, M, Haouz, A, Grana, M, Munier-Lehmann, H, Alzari, P.M.
Deposit date:2006-01-25
Release date:2006-05-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Crystal Structure of Mycobacterium Tuberculosis Adenylate Kinase in Complex with Two Molecules of Adp and Mg2+ Supports an Associative Mechanism for Phosphoryl Transfer.
Protein Sci., 15, 2006
2BWJ
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BU of 2bwj by Molmil
Structure of adenylate kinase 5
Descriptor: ADENOSINE MONOPHOSPHATE, ADENYLATE KINASE 5, CHLORIDE ION, ...
Authors:Bunkoczi, G, Filippakopoulos, P, Fedorov, O, Jansson, A, Longman, E, Ugochukwu, E, Knapp, S, von Delft, F, Arrowsmith, C, Edwards, A, Sundstrom, M, Weigelt, J.
Deposit date:2005-07-14
Release date:2005-07-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of Adenylate Kinase 5
To be Published
2C95
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BU of 2c95 by Molmil
Structure of adenylate kinase 1 in complex with P1,P4-di(adenosine) tetraphosphate
Descriptor: ADENYLATE KINASE 1, BIS(ADENOSINE)-5'-TETRAPHOSPHATE, MALONATE ION
Authors:Bunkoczi, G, Filippakopoulos, P, Jansson, A, Longman, E, von Delft, F, Edwards, A, Arrowsmith, C, Sundstrom, M, Knapp, S.
Deposit date:2005-12-09
Release date:2007-02-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structure of Adenylate Kinase 1 in Complex with P1, P4-Di(Adenosine)Tetraphosphate
To be Published
4IKE
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BU of 4ike by Molmil
Crystal Structure of a partly open ATP-lid of liganded Adenylate kinase
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Kern, D.
Deposit date:2012-12-26
Release date:2014-07-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:The ATP-Lid Opened Adenylate Kinase with Fully Occupied Substrates
To be Published
4JL8
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BU of 4jl8 by Molmil
A various kinds of ADP conformations in the Adenylate kinase active site
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JLA
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BU of 4jla by Molmil
Crystal Structure of Adenylate kinase with 2 ADP's in the active site
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JLD
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BU of 4jld by Molmil
Crystal Structures of adenylate kinase with 2 ADP's
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.552 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JLP
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BU of 4jlp by Molmil
Crystal structure of R150K aquifex adenylate kinase mutant
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Phung, L, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.433 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JLO
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BU of 4jlo by Molmil
Crystal structure of Aquifex adenylate kinase R150K mutant
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Phung, L, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JKY
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BU of 4jky by Molmil
Cobalt between two ADP's in the active site of adenylate kinase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase, COBALT (II) ION
Authors:Cho, Y.-J, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.373 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JLB
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BU of 4jlb by Molmil
Crystal Structures of Adenylate kinase with 2ADP's
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.528 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JL6
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BU of 4jl6 by Molmil
Crystal Structure of Adenylate kinase with 2 ADP's
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JL5
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BU of 4jl5 by Molmil
A high resolution structure of Aquifex Adenylate kinase with 2 ADP's
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
8CRG
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BU of 8crg by Molmil
E. coli adenylate kinase in complex with two ADP molecules as a result of enzymatic AP4A hydrolysis
Descriptor: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Oelker, M, Tischlik, S, Wolf-Watz, M, Sauer-Eriksson, A.E.
Deposit date:2023-03-08
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Insights into Enzymatic Catalysis from Binding and Hydrolysis of Diadenosine Tetraphosphate by E. coli Adenylate Kinase.
Biochemistry, 62, 2023

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PDB entries from 2024-08-07

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