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PDB: 339 results

1CHI
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BU of 1chi by Molmil
STRUCTURAL STUDIES OF THE ROLES OF RESIDUES 82 AND 85 AT THE INTERACTIVE FACE OF CYTOCHROME C
Descriptor: CYTOCHROME C, HEME C, SULFATE ION
Authors:Lo, T.P, Brayer, G.D.
Deposit date:1994-06-01
Release date:1994-12-20
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural studies of the roles of residues 82 and 85 at the interactive face of cytochrome c.
Biochemistry, 34, 1995
1CSV
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REPLACEMENTS IN A CONSERVED LEUCINE CLUSTER IN THE HYDROPHOBIC HEME POCKET OF CYTOCHROME C
Descriptor: CYTOCHROME C, HEME C, SULFATE ION
Authors:Lo, T.P, Brayer, G.D.
Deposit date:1994-10-04
Release date:1995-01-26
Last modified:2021-03-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Replacements in a conserved leucine cluster in the hydrophobic heme pocket of cytochrome c.
Protein Sci., 4, 1995
1CSU
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BU of 1csu by Molmil
REPLACEMENTS IN A CONSERVED LEUCINE CLUSTER IN THE HYDROPHOBIC HEME POCKET OF CYTOCHROME C
Descriptor: CYTOCHROME C, HEME C, SULFATE ION
Authors:Lo, T.P, Brayer, G.D.
Deposit date:1994-10-04
Release date:1995-01-26
Last modified:2021-03-10
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Replacements in a conserved leucine cluster in the hydrophobic heme pocket of cytochrome c.
Protein Sci., 4, 1995
1CSX
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BU of 1csx by Molmil
REPLACEMENTS IN A CONSERVED LEUCINE CLUSTER IN THE HYDROPHOBIC HEME POCKET OF CYTOCHROME C
Descriptor: CYTOCHROME C, HEME C, SULFATE ION
Authors:Lo, T.P, Brayer, G.D.
Deposit date:1994-10-04
Release date:1995-01-26
Last modified:2021-03-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Replacements in a conserved leucine cluster in the hydrophobic heme pocket of cytochrome c.
Protein Sci., 4, 1995
1CSW
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BU of 1csw by Molmil
REPLACEMENTS IN A CONSERVED LEUCINE CLUSTER IN THE HYDROPHOBIC HEME POCKET OF CYTOCHROME C
Descriptor: CYTOCHROME C, HEME C, SULFATE ION
Authors:Lo, T.P, Brayer, G.D.
Deposit date:1994-10-04
Release date:1995-01-26
Last modified:2021-03-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Replacements in a conserved leucine cluster in the hydrophobic heme pocket of cytochrome c.
Protein Sci., 4, 1995
1CNO
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BU of 1cno by Molmil
STRUCTURE OF PSEUDOMONAS NAUTICA CYTOCHROME C552, BY MAD METHOD
Descriptor: CYTOCHROME C552, GLYCEROL, HEME C
Authors:Brown, K, Nurizzo, D, Cambillau, C.
Deposit date:1998-08-03
Release date:1999-07-22
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:MAD structure of Pseudomonas nautica dimeric cytochrome c552 mimicks the c4 Dihemic cytochrome domain association.
J.Mol.Biol., 289, 1999
1DVH
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BU of 1dvh by Molmil
STRUCTURE AND DYNAMICS OF FERROCYTOCHROME C553 FROM DESULFOVIBRIO VULGARIS STUDIED BY NMR SPECTROSCOPY AND RESTRAINED MOLECULAR DYNAMICS
Descriptor: CYTOCHROME C553, HEME C
Authors:Blackledge, M.J, Medvedeva, S, Poncin, M, Guerlesquin, F, Bruschi, M, Marion, D.
Deposit date:1995-02-24
Release date:1995-06-03
Last modified:2021-03-03
Method:SOLUTION NMR
Cite:Structure and dynamics of ferrocytochrome c553 from Desulfovibrio vulgaris studied by NMR spectroscopy and restrained molecular dynamics.
J.Mol.Biol., 245, 1995
1DT1
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BU of 1dt1 by Molmil
THERMUS THERMOPHILUS CYTOCHROME C552 SYNTHESIZED BY ESCHERICHIA COLI
Descriptor: CYTOCHROME C552, HEME C
Authors:Fee, J.A, Chen, Y, Hill, M.J, Gomez-Moran, E, Loehr, T, Ai, J, Thony-Meyer, L, Williams, P.A, Stura, E, Sridhar, V, McRee, D.E.
Deposit date:2000-01-10
Release date:2000-02-18
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Integrity of thermus thermophilus cytochrome c552 synthesized by Escherichia coli cells expressing the host-specific cytochrome c maturation genes, ccmABCDEFGH: biochemical, spectral, and structural characterization of the recombinant protein.
Protein Sci., 9, 2000
1DVV
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BU of 1dvv by Molmil
SOLUTION STRUCTURE OF THE QUINTUPLE MUTANT OF CYTOCHROME C-551 FROM PSEUDOMONAS AERUGINOSA
Descriptor: CYTOCHROME C551, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hasegawa, J, Uchiyama, S, Tanimoto, Y, Mizutani, M, Kobayashi, Y, Sambongi, Y, Igarashi, Y.
Deposit date:2000-01-22
Release date:2000-11-29
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Selected mutations in a mesophilic cytochrome c confer the stability of a thermophilic counterpart.
J.Biol.Chem., 275, 2000
4AX3
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BU of 4ax3 by Molmil
Structure of three-domain heme-Cu nitrite reductase from Ralstonia pickettii at 1.6 A resolution
Descriptor: COPPER (II) ION, COPPER-CONTAINING NITRITE REDUCTASE, HEME C
Authors:Antonyuk, S.V, Cong, H, Eady, R.R, Hasnain, S.S.
Deposit date:2012-06-07
Release date:2013-03-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of protein-protein complexes involved in electron transfer.
Nature, 496, 2013
3HQ7
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BU of 3hq7 by Molmil
CcpA from G. sulfurreducens, G94K/K97Q/R100I variant
Descriptor: CALCIUM ION, Cytochrome c551 peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hoffmann, M, Seidel, J, Einsle, O.
Deposit date:2009-06-05
Release date:2009-09-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:CcpA from Geobacter sulfurreducens is a basic di-heme cytochrome c peroxidase.
J.Mol.Biol., 393, 2009
1RZ5
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BU of 1rz5 by Molmil
Di-haem Cytochrome c Peroxidase, Form OUT
Descriptor: CALCIUM ION, Cytochrome c peroxidase, HEME C
Authors:Dias, J.M, Alves, T, Bonifacio, C, Pereira, A.S, Bourgeois, D, Moura, I, Romao, M.J.
Deposit date:2003-12-24
Release date:2004-06-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the mechanism of Ca(2+) activation of the di-heme cytochrome c peroxidase from Pseudomonas nautica 617.
Structure, 12, 2004
2C1D
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BU of 2c1d by Molmil
Crystal structure of SoxXA from P. pantotrophus
Descriptor: HEME C, SOXA, SOXX, ...
Authors:Dambe, T, Quentmeier, A, Rother, D, Friedrich, C, Scheidig, A.J.
Deposit date:2005-09-13
Release date:2005-10-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structure of the Cytochrome Complex Soxxa of Paracoccus Pantotrophus, a Heme Enzyme Initiating Chemotrophic Sulfur Oxidation.
J.Struct.Biol., 152, 2005
1S6V
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BU of 1s6v by Molmil
Structure of a cytochrome c peroxidase-cytochrome c site specific cross-link
Descriptor: Cytochrome c peroxidase, mitochondrial, Cytochrome c, ...
Authors:Guo, M, Bhaskar, B, Li, H, Barrows, T.P, Poulos, T.L.
Deposit date:2004-01-27
Release date:2004-04-27
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structure and characterization of a cytochrome c peroxidase-cytochrome c site-specific cross-link
Proc.Natl.Acad.Sci.USA, 101, 2004
4GED
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BU of 4ged by Molmil
Crystal Structure of the Leishmania Major Peroxidase-Cytochrome C Complex
Descriptor: Ascorbate peroxidase, Cytochrome c, HEME C, ...
Authors:Jasion, V.S, Doukov, T, Pineda, S.H, Li, H, Poulos, T.L.
Deposit date:2012-08-01
Release date:2012-10-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystal structure of the Leishmania major peroxidase-cytochrome c complex.
Proc.Natl.Acad.Sci.USA, 109, 2012
6H5L
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BU of 6h5l by Molmil
Kuenenia stuttgartiensis reducing HAO-like protein complex Kustc0457/Kustc0458
Descriptor: Conserved hypothetical cytochrome protein, HEME C, Similar to hydroxylamine oxidoreductase
Authors:Dietl, A, Maalcke, W, Barends, T.R.M.
Deposit date:2018-07-25
Release date:2019-04-10
Last modified:2019-04-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A 60-heme reductase complex from an anammox bacterium shows an extended electron transfer pathway.
Acta Crystallogr D Struct Biol, 75, 2019
6HWH
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BU of 6hwh by Molmil
Structure of a functional obligate respiratory supercomplex from Mycobacterium smegmatis
Descriptor: CARDIOLIPIN, COPPER (II) ION, Co-purified unknown peptide built as polyALA, ...
Authors:Wiseman, B, Nitharwal, R.G, Fedotovskaya, O, Schafer, J, Guo, H, Kuang, Q, Benlekbir, S, Sjostrand, D, Adelroth, P, Rubinstein, J.L, Brzezinski, P, Hogbom, M.
Deposit date:2018-10-12
Release date:2018-11-07
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of a functional obligate complex III2IV2respiratory supercomplex from Mycobacterium smegmatis.
Nat. Struct. Mol. Biol., 25, 2018
8HDD
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BU of 8hdd by Molmil
Complex structure of catalytic, small, and a partial electron transfer subunits from Burkholderia cepacia FAD glucose dehydrogenase
Descriptor: FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, Glucose dehydrogenase, ...
Authors:Yoshida, H, Sode, K.
Deposit date:2022-11-04
Release date:2022-12-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Microgravity environment grown crystal structure information based engineering of direct electron transfer type glucose dehydrogenase.
Commun Biol, 5, 2022
8XCN
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BU of 8xcn by Molmil
Cryo-EM Structure of Membrane-bound Fructose Dehydrogenase from Gluconobacter japonicus variant-N1190A
Descriptor: FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, Fructose dehydrogenase cytochrome subunit, ...
Authors:Fukawa, E, Miyata, T, Makino, F, Adachi, T, Suzuki, Y, Tanaka, H, Namba, K, Sowa, K, Kitazumi, Y, Shirai, O.
Deposit date:2023-12-09
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:Structural and electrochemical elucidation of biocatalytic mechanisms in direct electron transfer-type D-fructose dehydrogenase.
Electrochim Acta, 490, 2024
8XCM
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BU of 8xcm by Molmil
Cryo-EM Structure of Membrane-bound Fructose Dehydrogenase from Gluconobacter japonicus variant-N1146Q
Descriptor: FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, Fructose dehydrogenase cytochrome subunit, ...
Authors:Fukawa, E, Miyata, T, Makino, F, Adachi, T, Suzuki, Y, Tanaka, H, Namba, K, Sowa, K, Kitazumi, Y, Shirai, O.
Deposit date:2023-12-09
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Structural and electrochemical elucidation of biocatalytic mechanisms in direct electron transfer-type D-fructose dehydrogenase.
Electrochim Acta, 490, 2024
8HCR
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BU of 8hcr by Molmil
Cryo-EM structure of the Mycobacterium tuberculosis cytochrome bcc:aa3 supercomplex and a novel inhibitor targeting subunit cytochrome cI
Descriptor: CYTOCHROME AA3 SUBUNIT CtaC, CYTOCHROME AA3 SUBUNIT CtaJ, Cytochrome bc1 complex Rieske iron-sulfur subunit, ...
Authors:Mathiyazakan, V, Gruber, G.
Deposit date:2022-11-02
Release date:2023-05-03
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY
Cite:Cryo-Electron Microscopy Structure of the Mycobacterium tuberculosi s Cytochrome bcc : aa 3 Supercomplex and a Novel Inhibitor Targeting Subunit Cytochrome c I.
Antimicrob.Agents Chemother., 67, 2023
8GY2
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BU of 8gy2 by Molmil
Cryo-EM Structure of Membrane-Bound Alcohol Dehydrogenase from Gluconobacter oxydans
Descriptor: Alcohol dehydrogenase (quinone), cytochrome c subunit, dehydrogenase subunit, ...
Authors:Adachi, T, Miyata, T, Makino, F, Tanaka, H, Namba, K, Sowa, K, Kitazumi, Y, Shirai, O.
Deposit date:2022-09-21
Release date:2023-08-02
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Experimental and Theoretical Insights into Bienzymatic Cascade for Mediatorless Bioelectrochemical Ethanol Oxidation with Alcohol and Aldehyde Dehydrogenases
Acs Catalysis, 13, 2023
8GY3
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BU of 8gy3 by Molmil
Cryo-EM Structure of Membrane-Bound Aldehyde Dehydrogenase from Gluconobacter oxydans
Descriptor: (MOLYBDOPTERIN-CYTOSINE DINUCLEOTIDE-S,S)-DIOXO-AQUA-MOLYBDENUM(V), Cytochrome c subunit of aldehyde dehydrogenase, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Adachi, T, Miyata, T, Makino, F, Tanaka, H, Namba, K, Sowa, K, Kitazumi, Y, Shirai, O.
Deposit date:2022-09-21
Release date:2023-08-02
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Experimental and Theoretical Insights into Bienzymatic Cascade for Mediatorless Bioelectrochemical Ethanol Oxidation with Alcohol and Aldehyde Dehydrogenases
Acs Catalysis, 13, 2023
6ADQ
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BU of 6adq by Molmil
Respiratory Complex CIII2CIV2SOD2 from Mycobacterium smegmatis
Descriptor: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate, ...
Authors:Gong, H.R, Xu, A, Gao, R.G, Ji, W.X, Wang, S.H, Wang, Q, Li, J, Rao, Z.H.
Deposit date:2018-08-01
Release date:2018-11-14
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:An electron transfer path connects subunits of a mycobacterial respiratory supercomplex.
Science, 362, 2018
5IY5
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BU of 5iy5 by Molmil
Electron transfer complex of cytochrome c and cytochrome c oxidase at 2.0 angstrom resolution
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
Authors:Shimada, S, Baba, J, Aoe, S, Shimada, A, Yamashita, E, Tsukihara, T.
Deposit date:2016-03-24
Release date:2017-01-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Complex structure of cytochrome c-cytochrome c oxidase reveals a novel protein-protein interaction mode
EMBO J., 36, 2017

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