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PDB: 599 results

1QXT
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Crystal structure of precyclized intermediate for the green fluorescent protein R96A variant (A)
Descriptor: green-fluorescent protein
Authors:Barondeau, D.P, Putnam, C.D, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2003-09-08
Release date:2003-09-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanism and energetics of green fluorescent protein chromophore synthesis revealed by trapped intermediate structures
Proc.Natl.Acad.Sci.USA, 100
1QY3
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Crystal structure of precyclized intermediate for the green fluorescent protein R96A variant (B)
Descriptor: green-fluorescent protein
Authors:Barondeau, D.P, Putnam, C.D, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2003-09-09
Release date:2003-09-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanism and energetics of green fluorescent protein chromophore synthesis revealed by trapped intermediate structures.
Proc.Natl.Acad.Sci.Usa, 100, 2003
2Q57
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BU of 2q57 by Molmil
X-ray structure of Cerulean GFP: A tryptophan-based chromophore useful for fluorescence lifetime imaging
Descriptor: Cerulean Green fluorescent protein
Authors:Malo, G.D.
Deposit date:2007-05-31
Release date:2007-11-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structure of Cerulean GFP: a tryptophan-based chromophore useful for fluorescence lifetime imaging.
Biochemistry, 46, 2007
3SG2
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BU of 3sg2 by Molmil
Crystal Structure of GCaMP2-T116V,D381Y
Descriptor: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ...
Authors:Schreiter, E.R, Akerboom, J, Looger, L.L.
Deposit date:2011-06-14
Release date:2012-06-20
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Optimization of a GCaMP calcium indicator for neural activity imaging.
J.Neurosci., 32, 2012
3OSR
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BU of 3osr by Molmil
Maltose-bound maltose sensor engineered by insertion of circularly permuted green fluorescent protein into E. coli maltose binding protein at position 311
Descriptor: Maltose-binding periplasmic protein,Green fluorescent protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Echevarria, I.M, Marvin, J.S, Looger, L.L, Schreiter, E.R.
Deposit date:2010-09-09
Release date:2011-10-26
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:A genetically encoded, high-signal-to-noise maltose sensor.
Proteins, 79, 2011
4IK3
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High resolution structure of GCaMP3 at pH 8.5
Descriptor: CALCIUM ION, RCaMP, Green fluorescent protein
Authors:Chen, Y, Song, X, Miao, L, Zhu, Y, Ji, G.
Deposit date:2012-12-25
Release date:2014-01-29
Last modified:2017-06-21
Method:X-RAY DIFFRACTION (2.007 Å)
Cite:Structural insight into enhanced calcium indicator GCaMP3 and GCaMPJ to promote further improvement.
Protein Cell, 4, 2013
4IK4
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BU of 4ik4 by Molmil
High resolution structure of GCaMP3 at pH 5.0
Descriptor: CALCIUM ION, RCaMP, Green fluorescent protein
Authors:Chen, Y, Song, X, Miao, L, Zhu, Y, Ji, G.
Deposit date:2012-12-25
Release date:2014-02-05
Last modified:2017-06-21
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural insight into enhanced calcium indicator GCaMP3 and GCaMPJ to promote further improvement.
Protein Cell, 4, 2013
4XBI
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BU of 4xbi by Molmil
Structure Of A Malarial Protein Involved in Proteostasis
Descriptor: ClpB protein, putative,Green fluorescent protein, SULFATE ION
Authors:Egea, P.F, Ah Young, A.P, Cascio, D.
Deposit date:2014-12-17
Release date:2015-07-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.013 Å)
Cite:Structural mapping of the ClpB ATPases of Plasmodium falciparum: Targeting protein folding and secretion for antimalarial drug design.
Protein Sci., 24, 2015
8AM4
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Cl-rsEGFP2 Long Wavelength Structure
Descriptor: Green fluorescent protein
Authors:Orr, C.M, Fadini, A, van Thor, J.
Deposit date:2022-08-02
Release date:2023-08-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism.
J.Am.Chem.Soc., 2023
5BT0
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BU of 5bt0 by Molmil
Switching GFP fluorescence using genetically encoded phenyl azide chemistry through two different non-native post-translational modifications routes at the same position.
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Hartley, A.M, Worthy, H.L, Reddington, S.C, Rizkallah, P.J, Jones, D.D.
Deposit date:2015-06-02
Release date:2016-07-13
Last modified:2017-05-10
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Molecular basis for functional switching of GFP by two disparate non-native post-translational modifications of a phenyl azide reaction handle.
Chem Sci, 7, 2016
6DQ0
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sfGFP D133 mutated to 4-nitro-L-phenylalanine
Descriptor: 1,2-ETHANEDIOL, SODIUM ION, superfolder green fluorescent protein
Authors:Phillips-Piro, C.M, Maurici, N, Lee, B.
Deposit date:2018-06-10
Release date:2018-10-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.048 Å)
Cite:Crystal structures of green fluorescent protein with the unnatural amino acid 4-nitro-L-phenylalanine.
Acta Crystallogr F Struct Biol Commun, 74, 2018
7A80
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rsGreen0.7-K206A-E222V in the green-on state
Descriptor: Green fluorescent protein, NITRATE ION
Authors:De Zitter, E, Dedecker, P, Van Meervelt, L.
Deposit date:2020-08-30
Release date:2021-02-17
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021
2HGY
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BU of 2hgy by Molmil
Structure of S65A Y66F E222A GFP variant after cyclization and carbon-carbon bond cleavage
Descriptor: Green fluorescent protein
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2006-06-27
Release date:2007-03-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis
J.Am.Chem.Soc., 129, 2007
4J88
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BU of 4j88 by Molmil
Dark-state structure of sfGFP containing the unnatural amino acid p-azido-phenylalanine at residue 66
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Green fluorescent protein, ...
Authors:Reddington, S.C, Jones, D.D, Rizkallah, P.J, Tippmann, E.M.
Deposit date:2013-02-14
Release date:2013-06-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Different Photochemical Events of a Genetically Encoded Phenyl Azide Define and Modulate GFP Fluorescence.
Angew.Chem.Int.Ed.Engl., 52, 2013
3UG0
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BU of 3ug0 by Molmil
Crystal structure of a Trp-less green fluorescent protein translated by the simplified genetic code
Descriptor: Green fluorescent protein
Authors:Kawahara-Kobayashi, A, Araiso, Y, Matsuda, T, Yokoyama, S, Kigawa, T, Nureki, O, Kiga, D.
Deposit date:2011-11-02
Release date:2012-10-17
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.093 Å)
Cite:Simplification of the genetic code: restricted diversity of genetically encoded amino acids.
Nucleic Acids Res., 40, 2012
7A84
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rsGreen0.7-K206A-F145H partially in the green-off state
Descriptor: Green fluorescent protein
Authors:De Zitter, E, Dedecker, P, Van Meervelt, L.
Deposit date:2020-08-30
Release date:2021-02-17
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7A8N
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BU of 7a8n by Molmil
rsGreen0.7-K206A-N205L in the green-on state
Descriptor: Green fluorescent protein
Authors:De Zitter, E, Dedecker, P, Van Meervelt, L.
Deposit date:2020-08-30
Release date:2021-02-17
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021
1RRX
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BU of 1rrx by Molmil
Crystallographic Evidence for Isomeric Chromophores in 3-Fluorotyrosyl-Green Fluorescent Protein
Descriptor: SIGF1-GFP fusion protein
Authors:Bae, J.H, Paramita Pal, P, Moroder, L, Huber, R, Budisa, N.
Deposit date:2003-12-09
Release date:2004-06-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic Evidence for Isomeric Chromophores in 3-Fluorotyrosyl-Green Fluorescent Protein.
Chembiochem, 5, 2004
1BFP
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BU of 1bfp by Molmil
BLUE VARIANT OF GREEN FLUORESCENT PROTEIN
Descriptor: BLUE FLUORESCENT PROTEIN
Authors:Wachter, R.M, Remington, S.J.
Deposit date:1997-04-09
Release date:1997-07-07
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure and photodynamic behavior of the blue emission variant Y66H/Y145F of green fluorescent protein.
Biochemistry, 36, 1997
1EMK
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BU of 1emk by Molmil
GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Palm, G, Zdanov, A, Wlodawer, A.
Deposit date:1997-03-31
Release date:1997-08-20
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structural basis for spectral variations in green fluorescent protein.
Nat.Struct.Biol., 4, 1997
6UHM
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BU of 6uhm by Molmil
Crystal Structure of a Physical Mixture of C148 mGFP and scDNA-1
Descriptor: C148 mGFP
Authors:Winegar, P.W, Hayes, O.G, McMillan, J.R, Figg, C.A, Focia, P.J, Mirkin, C.A.
Deposit date:2019-09-27
Release date:2020-03-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:DNA-Directed Protein Packing within Single Crystals.
Chem, 6, 2020
1F0B
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BU of 1f0b by Molmil
CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP) VARIANT YFP-H148Q
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Wachter, R.M, Yarbrough, D, Kallio, K, Remington, S.J.
Deposit date:2000-05-15
Release date:2000-11-17
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic and energetic analysis of binding of selected anions to the yellow variants of green fluorescent protein.
J.Mol.Biol., 301, 2000
7O7W
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BU of 7o7w by Molmil
Crystal structure of rsEGFP2 mutant V151L in the non-fluorescent off-state the determined by serial femtosecond crystallography at room temperature
Descriptor: Green fluorescent protein
Authors:Hadjidemetriou, K, Coquelle, N, Barends, T.R.M, Schlichting, I, Colletier, J.-P, Weik, M.
Deposit date:2021-04-13
Release date:2022-07-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Rational Control of Off-State Heterogeneity in a Photoswitchable Fluorescent Protein Provides Switching Contrast Enhancement.
Chemphyschem, 23, 2022
4J89
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BU of 4j89 by Molmil
Different photochemical events of a genetically encoded aryl azide define and modulate GFP fluorescence
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Green fluorescent protein, ...
Authors:Reddington, S.C, Jones, D.D, Rizkallah, P.J, Tippmann, E.M.
Deposit date:2013-02-14
Release date:2013-06-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Different Photochemical Events of a Genetically Encoded Phenyl Azide Define and Modulate GFP Fluorescence.
Angew.Chem.Int.Ed.Engl., 52, 2013
2Q6P
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The Chemical Control of Protein Folding: Engineering a Superfolder Green Fluorescent Protein
Descriptor: Green fluorescent protein mutant 3
Authors:Steiner, T, Hess, P, Bae, J.H, Wiltschi, B, Moroder, L, Budisa, N.
Deposit date:2007-06-05
Release date:2007-06-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Synthetic biology of proteins: tuning GFPs folding and stability with fluoroproline.
Plos One, 3, 2008

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